Ccil018629.2
Basic Information
- Insect
- Corythucha ciliata
- Gene Symbol
- retn_1
- Assembly
- GCA_038030265.1
- Location
- CM075940.1:17229394-17235620[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-20 9.2e-17 62.5 0.0 13 89 6 80 2 80 0.94 2 2 4.5 1.9e+04 -2.7 0.0 26 38 221 233 208 236 0.74
Sequence Information
- Coding Sequence
- ATGTTCGATGAGGGAATGAAAAGAGTAAGTACTCCCATTAATCGACTTCCCATCATGGCCAAATCGGTGTTGGACCTCTTCGAACTGTACAATCTGGTCATTCAGAGAGGCGGTTTAGTTGACGTTATTAACAAAAAACTGTGGCAAGAAATAATTAAAGGACTGCATTTGCCGTCTTCGATCACGTCGGCCGCGTTCACCTTAAGGACCCAATACATGAAGTACCTGTACCCGTACGAGTGTGAAAAGAGGCGCCTCAGCACGCCTGGCGAACTTCAGGCGGCCATCGATGGGAATCGACGCGAGGGGCGTCGAGGAAGTTACGGAACGTATACTGAAATGATGCAGAGGAGCCCAGCGGCTCATCTGAATAGCAGCACCTCTTCGCCGGGCATGAGTCTCGTGCATCGGGGACCAGTGTCAATGAACGGCTCCTCGCCCTCTTCACACCTAAATAACAACAATCACATATCACACCAGGGCCTTCTTCCTCCTTCGATATCTGGCACAGCGACAATTGGTCCAAATTCGTTTGAAGCGAGAATGGTCGAGTATGTGAAAATGATTAATAAGGAACTTGGATCGACACCAGCACCTCCTGTTCACCGGCCGAGTTCTCCAGGATCACCCCCTGAAGGGAGCACAAACAGTATCAACCCTTTAGAAATGTCAAGGCTGACACTGTGGAACCTCTATCAGTCCACAGCGCCGCATGAACCGCAGAAGGAGGCCCTCAATTTGGAGAAAAGGGATGATCCACTGCCTCCACCACCGCCCCCTAAGAGGCACTATCCAGATAATCAGGACGATATCAACGTGTCAGGAGCTCATATAAAAATCTCCAACCGAGGTGATTCCATCAATCCAGTCGACCACTTTCAATCCTTGGCGAATGTTGCGGGCCCTTCCTCGAAGAAAATAGCTGACAGCCCTAGAAAAGGTCAATTTTACTGCTCATCCTTGAAGTTTACCTGTGTAACCGTCCATTTATACACTGGGAAAAACACTATTGTACGAATGGCATAG
- Protein Sequence
- MFDEGMKRVSTPINRLPIMAKSVLDLFELYNLVIQRGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPGELQAAIDGNRREGRRGSYGTYTEMMQRSPAAHLNSSTSSPGMSLVHRGPVSMNGSSPSSHLNNNNHISHQGLLPPSISGTATIGPNSFEARMVEYVKMINKELGSTPAPPVHRPSSPGSPPEGSTNSINPLEMSRLTLWNLYQSTAPHEPQKEALNLEKRDDPLPPPPPPKRHYPDNQDDINVSGAHIKISNRGDSINPVDHFQSLANVAGPSSKKIADSPRKGQFYCSSLKFTCVTVHLYTGKNTIVRMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -