Ccas036423.1
Basic Information
- Insect
- Coronaproctus castanopsis
- Gene Symbol
- stc
- Assembly
- GCA_032883995.1
- Location
- CM065053.1:216244859-216274090[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 1 5.3e+04 -4.2 1.6 15 19 394 398 393 398 0.81 2 11 0.086 4.6e+03 -0.7 0.4 4 10 428 434 427 434 0.95 3 11 4.6e-06 0.25 12.9 18.8 4 18 447 461 445 462 0.93 4 11 7.2e-08 0.0039 18.7 8.9 1 18 498 515 498 516 0.97 5 11 3.3e-10 1.8e-05 26.2 10.4 1 18 556 573 556 574 0.97 6 11 3.2e-06 0.17 13.5 11.5 4 19 622 637 615 637 0.87 7 11 0.001 53 5.5 8.4 1 11 677 687 677 688 0.96 8 11 1.5e-08 0.00078 20.9 12.0 1 19 704 722 704 722 0.99 9 11 0.0019 1e+02 4.6 7.4 10 19 769 779 767 779 0.92 10 11 8.4e-08 0.0045 18.5 11.8 1 15 815 829 815 840 0.90 11 11 0.013 7.1e+02 1.9 12.2 1 18 847 867 847 868 0.81
Sequence Information
- Coding Sequence
- ATGAGTAATATGAATGGAGAATTTTCCAATTTGAACGGTTTATTTCATAATGTGTCAAATTCAAGATTAACACCAACAGCGGCAGTATTTATACCTCGATCGTATAATTTGGaatCCAGACATAATCAGTTCAGTGGAATTGGGGTTGGTAGTGTTCATGGTGAAAACTATGGGGATCCTGGTTTCCAGCCTTGGTTTGGGTCAAACATTACGTTTGATGTCGATTCCTTAAATAATCAACATCGTGATTCCCAATTTGAAAACGTATATCATTCTAATTTAGCTGAATCAGTCAACTATTCAGCTAATTCCAGGATTTTGgagaataatttattacaaaattattcagttCAAACCCCCTGTATTGATGTAAATCCGAATGATAATTTCTACGGATTTCATCCACAATATTATACGCCAAGAAACTGTTCCGCAACTTCGCGTCCGATTGTAAATACTTCTTCGCAATTTGGCAATGATGCTCATGAGACGTGGGAAAAAATGGCTGAAAACAATTACTgctGGGGTAGCGATTATAACGAGGTAACGCATGACGACAATGGAAACAATCGTTATAATGCTGGTGTATGTATACCGTCATCTGTATTCGAAAATGCGAAGTATAAAAGTAACACGCAATTTATTTCAGGATCTGGATCATCCAGTTGCATGTCAACAAAGTTAAATATTATAACCGTGGAGGAAAAACCATCggGAAGACGAGAAAAATGGCGATCGATACTGGAGTGTATGGGTTTCACGCATCCATCGTTTAAAAGCGCGGTAATATTAATGAAGGTTGGAACGGAGCTTCAGACCGCCAAAGTTTCTCCAAATAAGCTTGCAGAAAAAATGTTGGCAGTAGACAATACTCGGGTACGGATAATGACGCCAGCTAAGTTACAGGATGGCACGCTAAACTCTCCTTTTATCGTTGAAGAAGTGAAATCTACAATTAAGTCCATTCAAATCGTAAAACAGGCTGGCGCCTCCGTATGTCAGCGAGATGATTTAATGGAGCAGTTAAGAAATGCTACATTAGAATGTTTAGTTTGTTGCGACAGAATTCATCAACGAGAACCAACTTGGAGCTGTAGTAATTGTTATCATGTATTACATTTTTGGTGCATCGTACGTTGGGCGAAATCATCTCAGGACGAGAATACAGCATCGTGGAGATGTCCGGCTTGTCAGAATGCGAACACTGTAATACCAGCtaaatatgtatgtttttgTGATAAAAACATTCTACGAACTGAGTGGAATAAAGTTGACGTACCTCATTCATGTGGAGAAATTTGTACCCGCTTCAAACATAAGAATTCAACTACGTGTTGTCATCGATGTACTTTGCTATGTCATCCAGGTCCGTGTCCGCCCTGTGTGGTACAAGTTACTAGaAAATGTGGTTGCGGGAAAACAAATCAATTTGTGCAATGCGGTTCTTCTCTTAATGTCGTATGCggtaatatttgtaataaattactaaattgcGGAGTTCATTATTGTGCCGCGAACTGCCACGTCGGTGAATGTAAATCGTGCGAAGATACGGTAACAAATAACTGTTATTGCGgacgaacgaaaaaaaaagaaatatgtcgAGCTGGGATAAGCGAACACGATCGATTTAGTTGCGGTTTGCCGTGCGATCGTACGCTGGATTGCGGAAATCATAAGTGCCAGGACATATGTCACGAAGGTTTATGTAAAGTGTGCGATAAGATGCCGACCGCGGTAACCGCTTGTCCGTGCGGAAAAACTAAATCCAACGATTACGTCAGATTGTCCTGTCTCGAGCCATTTCCGCTTTGTTCTAACGTCTGCGGAAAGTTATTACCGTGCGGTTCCCCTCaaaaacctCATTTTTGCGAAATGACGTGTCACGAAGGTGATTGTAGACCATGCAGCAAACAGACAACGATAAGATGTCGTTGTGGTAGTAATAGTAAGACCGTACCGTGTTTGGATCTTTGCCGAAGCGTGTCCGATTTTCATTGCAAGAAAAAATGTAATaggAAACGTAAATGTGGCAAACATAAATGCAATCAGGCGTGTTGTATCGATTTGGAACATAATTGTCTTTTGAGGTGTAGCGGTATGTTAACTTGCGGTAGACATCGGTGCGACCTCTTATGTCATCCTGGAAAATGTGTAACTTGTCCGCAAACTAGTTTCGACGATTTATTTTGTCACTGCGGCAAAACCGTCATGCACGCTCCTATTCCATGTGGTACTAGACCGCCTATTTGTGATTTTCCGTGTGTACGAATTCGTAGCTGTAAACATCCGACGTTTCATAATTGTCATTCATCCGGCGATTGTCCGCCGTGTACAGTGTTCACGGATAAATTTTGTTACGGTGGTCACGAgTTACGAAGAACTATACCGTGTTATCAGAAAGAATTTTCTTGCGGCCTACCATGTGGAAAACAGCTTCCTTGCGGGTTGCACACTTGTACAAAACCCTGTCATGACGGTGATTGTTTACTCTCCGGAGAGAAATGCAGTAAACCTTGCATAAAACCAAGATCTTTATGTGGTCATCCTTGTAACGTTCCTTGTCATCCTCAACGAAGTGTATGTCCAAATACTCCTTGTCGCAAAAtgATAAAGATTACTTGTCAGTGCGAGAATCGCGTAGAACTCCATCCTTGTTCAGAGCATACTaaagattttgaaaatatcgtctCTTCCACTTTAGCACCTCAAATGGCGCAGTTACAGTTGAGCGGTGTAGTAAATACGGCTGACGCAACAGAAAAAATCGCGGAGAAAAGGCGCCTTTTAAAAATatttgaATGTAATGAGGAATGTTCGATTATTATGAGGAATAGGCGTTTAGCTTTGTGTCTCCAAATTCAAAATCCTAACTTAAGTCCGAAGATAATTCCGCAATATTCCGATTTTATGAAACAGTGGGCTAAAAGGGATCCGGCATTATGTCAGCATGTTCACGAGAAGTTATCTTCATTAGTTCAATTGGCCAAAGAaTCTAAACAAAAAAGTCGCAGCTATTCATTCGAAGTGATGAACAAGGATAAAAGGCAATTCGTTCACGAATATTGCGCCCATTTCGGATGCGAGTCGCAAGCTTATGACGCTGAACCAAAGAGAAATGTAGTAGCTATCGCTGTCAAGGATAAGtGTTGGTTACCATCTTATAGTTTGATGCAAGTTGTACAGAAAGAAATGGGTTATCGTAAAATTCATTTACCGGCATTCGCGAACAGAAAACACGGATCTAATTCCGGTGTTCATTCGGAAGAATTGAGTTCAAATATGGTGATTATGCCGATTGCACGAAACAATTCATCGTCCTAA
- Protein Sequence
- MSNMNGEFSNLNGLFHNVSNSRLTPTAAVFIPRSYNLESRHNQFSGIGVGSVHGENYGDPGFQPWFGSNITFDVDSLNNQHRDSQFENVYHSNLAESVNYSANSRILENNLLQNYSVQTPCIDVNPNDNFYGFHPQYYTPRNCSATSRPIVNTSSQFGNDAHETWEKMAENNYCWGSDYNEVTHDDNGNNRYNAGVCIPSSVFENAKYKSNTQFISGSGSSSCMSTKLNIITVEEKPSGRREKWRSILECMGFTHPSFKSAVILMKVGTELQTAKVSPNKLAEKMLAVDNTRVRIMTPAKLQDGTLNSPFIVEEVKSTIKSIQIVKQAGASVCQRDDLMEQLRNATLECLVCCDRIHQREPTWSCSNCYHVLHFWCIVRWAKSSQDENTASWRCPACQNANTVIPAKYVCFCDKNILRTEWNKVDVPHSCGEICTRFKHKNSTTCCHRCTLLCHPGPCPPCVVQVTRKCGCGKTNQFVQCGSSLNVVCGNICNKLLNCGVHYCAANCHVGECKSCEDTVTNNCYCGRTKKKEICRAGISEHDRFSCGLPCDRTLDCGNHKCQDICHEGLCKVCDKMPTAVTACPCGKTKSNDYVRLSCLEPFPLCSNVCGKLLPCGSPQKPHFCEMTCHEGDCRPCSKQTTIRCRCGSNSKTVPCLDLCRSVSDFHCKKKCNRKRKCGKHKCNQACCIDLEHNCLLRCSGMLTCGRHRCDLLCHPGKCVTCPQTSFDDLFCHCGKTVMHAPIPCGTRPPICDFPCVRIRSCKHPTFHNCHSSGDCPPCTVFTDKFCYGGHELRRTIPCYQKEFSCGLPCGKQLPCGLHTCTKPCHDGDCLLSGEKCSKPCIKPRSLCGHPCNVPCHPQRSVCPNTPCRKMIKITCQCENRVELHPCSEHTKDFENIVSSTLAPQMAQLQLSGVVNTADATEKIAEKRRLLKIFECNEECSIIMRNRRLALCLQIQNPNLSPKIIPQYSDFMKQWAKRDPALCQHVHEKLSSLVQLAKESKQKSRSYSFEVMNKDKRQFVHEYCAHFGCESQAYDAEPKRNVVAIAVKDKCWLPSYSLMQVVQKEMGYRKIHLPAFANRKHGSNSGVHSEELSSNMVIMPIARNNSSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -