Basic Information

Gene Symbol
HIVEP1
Assembly
GCA_032883995.1
Location
CM065053.1:60611335-60645787[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.00048 0.13 14.2 3.4 1 23 177 199 177 199 0.98
2 8 0.05 14 7.9 2.4 1 21 205 225 205 229 0.85
3 8 0.0052 1.4 11.0 0.4 1 20 758 777 758 778 0.95
4 8 5.6e-06 0.0015 20.3 2.7 1 23 1589 1611 1589 1611 0.99
5 8 0.00023 0.064 15.2 4.5 1 23 1617 1641 1617 1641 0.92
6 8 7e-07 0.00019 23.2 0.3 2 23 2259 2280 2258 2280 0.97
7 8 0.039 11 8.2 2.5 1 20 2286 2305 2286 2310 0.93
8 8 0.00066 0.18 13.8 0.6 1 23 2331 2355 2331 2355 0.93

Sequence Information

Coding Sequence
atgGCCGCCGCTACTTCGGACGGCGATTTagataaagataataataatgtcgacGCCGTTATTAACGACGGCGTACGTTCGTTACAATCGACCGTTTTACCGTCAACCTCCGTATCATCGAAAGTTGCTGGCGATTCTGTGaccaccactactactactactatctTGCGTAACGATACCGTATACGTGATAAATACGTCGCCGTTACAACCGATATCCGTTACTACGACTAATAAAAATTCGTCTGTCGTCACGGTCGATTTTAAATCGGACGACGACGGTCGATGTAACGGTAACGATCCTTTTTCGGTTGCTGTTAAAAATGaccgattaaaaaaatcacCGGATCGCTTAACGAAAACCGTTTCCTCCGTTAATagtattactaataataatattcataataaaacgTGTCCGGACAACGGCGTTTTAACGGCCAAGTCTAATCCTACAAACATcggtaataacaataatagtaataataataataacgactcGTCTTCGTCGTCGATAATGGCCGTTAATCGATACGTTTGTCATTATTGTAAATTAGTTTGTAACAAACCTAGCGTACTTAAAAAACATATTCGAGCGCACACTAACGAAAGACCGTTTCCGTGTCTTCCGTGCGGCTTCGCTTTTAAAACTAGAAGTAACCTGTATAAACATTGTCGATCTAGGGCGCATACGTCGAAAATGGAGGAACTGGAACTAGATCCTAATTTTAAACTGTACAACGATCAACGTTTACCGGCCGAATATTCAGTATCGTCATCTACCGACGAAGaagataacagtaataataatgataataatcacgatgattataataataatgataataataataacgacgatagtaatagaaataacgatgataataatatcggTAATCCTACCGATACTAGTCGTGATAACTGTACGAtggtaaacaataaaaatttaacatttgcCGTTCAATCTGAAACGGAATCGTCCGGAACGTCGTTATCGCCGTCTAAAATTGAAATTCCTTCCAAGACGATTTATAAACCGAAATTTCATAAAGCGGTCGTCAGCTATCTTCAAAATTCTAGAATATCACCGACTACGGAAATTAGTCATTCGTCATCCTCTGTTCGATCTAAAGATTCGGATATATCTTATCAACAAGAACATACCTTAAATAAACTCGGTTTACAATTGAAAATACCTCCgaatagtcataataataataataataataataataataataataataataataataatagtaataataataataataataacgtgaatAGTAATAATTCCGGTCCGATATCACCGTTTATCGCTACTAGCGGCGGTTCTTCTCCGAATCCGGAATTTTTACATCGACATATCAGCAAATTAATTAGCGAAAATCAAGCTATCGTCGAAACTACAGATCCGTTATGGtcgaaaaaatttcatcaaCAGCAAAAGTTGTCCTCCAGAGATAACGCTACAGTTCCGTCGACTTTAACTTTACTACATACTAATTCggttactactactattacaacTACTGCGACCGTAACTATCAGTAATAATGTTTGCAGTTCGGAGAACTTTAACGACGGCCGTCGGAAAACCGGTTTTTCGTCGGACGTTATTAATCCGTCTAGTTTATCGTCGTCGTGTGACAACGTTGTTTCGCGGTCCAAGTTAGCGAACGCTTTACTTGTCGAATCGTCATCTTGTAGTAATAACGCTGGTCTCAATATTATCGATAACGGTAAATTCGTTCGAATCCGTACCGAAACGGATAATAATCGTCTTATCGTCGACGCTAATAATACCGTTATCGCGGCAGATATCGCCAGTCAGCAACCTTTGAATCTTACCAAACCTAAAGATATTTTTGTATACGATTTCGTCCGTACTCTAAATACGACCGttactactaatactactactgctactactGCTACTACTTTAGATAACGGTAAAAGAGCTACCGTTATCGAagataattcgaaaaaaaaaacttattacgACTTTAATAGTTCTAACGTCGTCGGTACCGTCACCGCTACTACGGCTACTTTAGATTCTAGTTCCATAAAAGAGGTTTTACTGAAAGTCAATCACCAGCAGCAACAAAAAATTGGCAATAATAAAACTGCGACgactattactaataataataataataataataataataataataataacgctgtTGCTACTACCAATAGCGTTTTGTTAACAAGAGACGATACTGTAACAGCTACCGCTGTCGCTGCTAAATATTGCCGTGTCGAGCATGTTTGCACTTTATGCGACGAAACGtacgaaaattacgaaaaacTGAAAAATCACATATTGTGCGAATGTAGAGGTAAAAAACGACGATACAATAATAGTCGCAATAATACCACGTCCGATGGTACGTCCGCTTATAAATCTCGACCGACGTCCTCGTCTTATAAATTCGTTAATCAACCGTCGTCCTATAAGATCAGATCGACTTCTTCGTCTAAAACTGTCCCGACGACTATTAGTAATTATATATCGGTTCCTCCTCAGCCGCCACCATCCGGACACGCTTCCGTCGATAAAACGCATTTGATCGACAATTATAAAAGTTTACTTAAAAATAGTCCTAATAAAAAATCGGTTAATAACAACAAATCGTTGCCCGCTCCGATAGCGACGACTGTTACGGCTACTTTGAAATCGTTAGAAGAACTTTCCATCTCGCCTACGGCCGCTAAAACTGTTTCTTCTTCTCAGTTTCATCGTACGTCCTCTCATCGTATCAATGACCGTTTCAGCGTTGTTATGTCCGGAGAAAATGACGTAAAAAATTCGACTAGCACcgtgttatttaataataacgacgataataataacgaaaataatagtagtaatatcAATAGTAAGAATAATAGTAACATCATTCATCGGAAAGATTATATACCTTCCGCCGTGGAATTgtcttcaaaaattttacaaccGCCGTTTAGCACCGTTGTTATCGCCGCTGGACAGCAACTTCCtactaatcataaaaataataaccgtTACGCGACTACCGTTATCGCCGCCggtaaacaaattcaaaatcaACCGCACGTAATCGATAATAAATCGATGCCCAAATTGAATCGTATTTTCATTCCGATTTCGACTACTTTAACTACCGTATCAGCGGCTACACCATCACCGCCGACTACAGTCGTCCCGtcgattattaataatcaaCGAACCGGTTGTCTGATATCGTACGACGCAAATACGTCGACTATATTTAACGGCGGTGGTATACCGATAGAGAATTCATCTAGTTCTTCCGTTACAACACCGTACGTTATCGATTACAATAACGTTATCGGTAACAATAAGAACGTTACGTCTACGATCGGCGGATGCGCTACTCCCGGTGGAGTAGTTACTATATTGCACGCCGGTAAAGCTATACCGTACGTTCCCGGAATTCCAGGACCGCATACATTAGGAGTCGGTGGTTCGTCGTATAGTTCCGACGAAGAGACTCCGATCGAGTTGAATATCGTCGAAGAAGATTCCGATGTGGAATCGCCGTCATCTTCGTCTTTAACTTCGGCAGAATCTGTTGGATTACGATTACCGACGCTATTTTCAGCTGAAACttctcgtaataataataataataataataataataatagtcaagCGTTTTTCAATAATCGTCGTCATCAAAAACCAGTTTGCACGGAGGTTCTATTGAACGCGTCGACCAATCTTAAAGTACCGGTGAAATACGAGGTACATCAtcaagaggaaaagaaaattactttgACATTGGCTCATTTCGAGGATTCGATATTGGAGAAGCTCGAACAGGTGGACAATTCGCTACTTCAAAAGTCCGCTTCGACTGCGAACACTAACAGTAGCGGTAGCTGCATGGGCGTTGACAGTAGTAACAGCGAGAAGAATAAATTTACTAGACCGACGTTTTTACCGTTAAAGCCCGGAACGTTCGCTGTCAAACGTATATCGATAGGCGTATCGGCTACTTTATCGTTAATTAGCCCGGAAACTCCCCGTCCGAAAAAATCGTACGGTCAATTGTACATTAACGGTAACGCTTATACCTATCTAGGAATGAAGTGTTCTACACGAGTTACCTACTGCACGATGCATAAATCTCAGCCGACCTACGTCTTGATTAGTCCGGAACACTCTAAAATATCCATGTATTCCAACTGGAAGcaAATGTCGGCCGAGAGTGACGCTATTCTACCTGGTGTATCGACGTGCAAAGCTTTAGGATGTTACGACTCTCGTCACAGGCAATCTGTATATACTGTGGCTCATGGTAAATTGAAGGATGCTGTTACACATTCTTTTTATTGGTTTAATAAATCTGATCCGATAGAGGAATCTAAAGATCAAGAGCAACCGACGGAGTGTAATCCAGCGCTTACCATCGACGAGGATACAATTGAAAGTAATTTAATACCAGAAGAAGCCGGTTCCCGTAAAGGGAAATCTAGTGAAAGCCAATTGTTAAATCTAACTGAACACATTGAAGATGGATATCAGAGAAAACAGATTACCGGTGCTATATTTGTAGATCTTAGTGCAGCCTATGATATAGTAAATCATAACAGATTGTCAAAGAAAATATACGACCTAAGTAAAGATTTCACAAAAtCTGAAATTGAAAATGCCATCGAAAAAGCTTCCAAAAGGCATAATAAAATATGCGACGGTGGGGTCGAATCATCCGATGAATATACTTACGTCAGAGGTCGTGGAAGGGGGCGTTACAAATGTTTGGAGTGCGGTATCCGTTGCAAAAAACCGTCCATGCTTAAAAAACATATCAGAACGCATACTAATGTCCGCCCGTACACCTGTAAACATTGTATATTCAGTTTTAAGACGAAAGGTAATTTAACCAAACATATGAAATCTAAAGCACATTATAAGAAATGCGTCGATTTGGGAATCATTCCAGTGCCAACGTTTCCTGATGGCACCCCTGAAGACAACTGCACGATATCTAATAACTCTCGGCAAGATCCGAGTGCGGATGATGATTGGGAGGAAGGTGAAGGAtgcgatgaagaagaagaaggcgATGAAGAAGAAGTCGACGATGAAGAAGACGAAGCTGAGGACGAAGAGGATGACTTTGAAGAAACTAAAATtgACAACAACAAACGTCAATTAGAACGGGAAGCTGTACGAACGTTATTGCGTTTATCAGAAATGACTCATCAATCAGTGGCCGAGCAATATGCGAACGCCGGTCTGACTTCGTCGAAAGTCAGACCTTATTCCTATCCGTATCGTCATTTGTCTAGCCCTCATTTGTCTTCCACCGCAGCTCACACTCCAACTTTGTCTTTAACGAGCGAACAAAAAGAGAGGGAAAaaGTATCTCGTAATACGGGTCTCGCGAGAGAATTCCAGCCGTATATACCAGATAAATTATATTGCATGGACCGAAATAGATGCAATTATGGTTCGGTTTCTAATACGGTCGGTACATTGACTCACAATCTTACTAATGATCTCCACGAAGAGTTTTCAAACGATCTGTGTACAATATCTTCTGGTCTTCCTATGGATCTCAGTAATAAAAATTCTACTTttAAATCGTCCTCGCATAATGACGTAACGATTTACGATAATGGTAGTAGTAGTCTAACAGCGTACGGCGGTGAAGCATCCGTTTTGAAACGTCAACCGATCATTCCGATATCGGAAATTTTAACTCCGGTTTCGGAACCGGTTCTATTGGCTACTATATGCTCGTCGATGGATAAACTTCCGATTTCTTCCGGATTTTCTACAGACGTCGATGCTGCAGCGACTTCGGACGAGAACGTTATGTTTCGCgcttatataaaagaaagagcCATGCAAGATGTACGGgttaaacaacaacaacgacAATATCATTTTCAGCATATCAAAGAATTGGACGAAAATACGGAATTTCAGTTGAagtacaatttatataataaagccTTCCAAACCGGCGTCATATTAGGAAACGCTGGTACGAGAAATAATTTATCGGCGGACTCGAACATGGCGAACGATAATTCGCAGAAGAAAAacaaacgtaattttaattataatataattcataCCGCTACTCCAACTACTACTATCGCTAATACGTTACAGAACGATTTGAAAACGACTAAAGAATTCGATATCGTTACCGGCGATAATCGTTCCTTCGCTAATAATGCCGCTATAGAGAAACGGAACAGTCTTAATAATGTTAGCTCCAACAACGGCATCGAGACTAGTAACGTCGACGACGACCAAAACGATAGATCGTCTTTAAGGGATCGGCAATTATCCCGTTCGTAcgttaacgaaattaaaaccACTCACGCTGACGAGATATTGATTCAAACGGACGGCAAACAAAGCGAATTGATGACGTTAGCTCATACCGCTTCCggaatgtgtaaaattaaatgtaacgACGTCAATAATAGTAATGACAATAGTACGAGCGCGAGATGTAACGACGATGGTAATGCTAGTGATCACGGTAATCCGACTACAATCAATACGGATAACATTAACGCCGATGACAATACTAATATCGgtcgtcataataataataataataataataataataataataataatgtaaatcaaattaacaataataataaaattttactatcgtCGGCCGTAACATCGAAGGATAGTCGTTCTCTGAAGAAACTAAAAGTCGAATTTATGCCTCCGTCATCCGGGCCATCTCCGAAATATGCTAGCGTTCTAGAAGACGGCCGCAGTAAATGTGAAATCTGCAATAAAATATTCACCACTCCGAGTCAGTTGCGAATTCATTTGAATATTCATTACTTCGAGAAAAGGTTCCGATGCGAAACGTGCGCTGTATCTTTCCACACGAAAGCGCAGCTTCATAAACATTTGGATGATAATTCTCACAGAATTAAGGTCAGTATGAATTCATCGAACGGTGTATCATCGTCCAGTAATCCGCGACCGTTTAAATGTGACGACTGTAGCGTCGGTTTTAGAATTCCGGGACATTTGGCGAAACATTTACGTTCGAAGATGCACATAATGAAATTGGAGTGTTTAGGTAAATTACCGTTCGGCACTTACGCCGAAATGGATAGACGAGGAATGAACATGAACGATATAGATACGACGGATTGCGAGAATTCTTTGGAAAGCCTTAAgaGAATCGCAGAAAATTTACTATCATTATCAGAAGATAACGCTGAGCTTCCGATATCAGACAAACCACTGTCTTCgtatcatatttaa
Protein Sequence
MAAATSDGDLDKDNNNVDAVINDGVRSLQSTVLPSTSVSSKVAGDSVTTTTTTTILRNDTVYVINTSPLQPISVTTTNKNSSVVTVDFKSDDDGRCNGNDPFSVAVKNDRLKKSPDRLTKTVSSVNSITNNNIHNKTCPDNGVLTAKSNPTNIGNNNNSNNNNNDSSSSSIMAVNRYVCHYCKLVCNKPSVLKKHIRAHTNERPFPCLPCGFAFKTRSNLYKHCRSRAHTSKMEELELDPNFKLYNDQRLPAEYSVSSSTDEEDNSNNNDNNHDDYNNNDNNNNDDSNRNNDDNNIGNPTDTSRDNCTMVNNKNLTFAVQSETESSGTSLSPSKIEIPSKTIYKPKFHKAVVSYLQNSRISPTTEISHSSSSVRSKDSDISYQQEHTLNKLGLQLKIPPNSHNNNNNNNNNNNNNNNNSNNNNNNNVNSNNSGPISPFIATSGGSSPNPEFLHRHISKLISENQAIVETTDPLWSKKFHQQQKLSSRDNATVPSTLTLLHTNSVTTTITTTATVTISNNVCSSENFNDGRRKTGFSSDVINPSSLSSSCDNVVSRSKLANALLVESSSCSNNAGLNIIDNGKFVRIRTETDNNRLIVDANNTVIAADIASQQPLNLTKPKDIFVYDFVRTLNTTVTTNTTTATTATTLDNGKRATVIEDNSKKKTYYDFNSSNVVGTVTATTATLDSSSIKEVLLKVNHQQQQKIGNNKTATTITNNNNNNNNNNNNNAVATTNSVLLTRDDTVTATAVAAKYCRVEHVCTLCDETYENYEKLKNHILCECRGKKRRYNNSRNNTTSDGTSAYKSRPTSSSYKFVNQPSSYKIRSTSSSKTVPTTISNYISVPPQPPPSGHASVDKTHLIDNYKSLLKNSPNKKSVNNNKSLPAPIATTVTATLKSLEELSISPTAAKTVSSSQFHRTSSHRINDRFSVVMSGENDVKNSTSTVLFNNNDDNNNENNSSNINSKNNSNIIHRKDYIPSAVELSSKILQPPFSTVVIAAGQQLPTNHKNNNRYATTVIAAGKQIQNQPHVIDNKSMPKLNRIFIPISTTLTTVSAATPSPPTTVVPSIINNQRTGCLISYDANTSTIFNGGGIPIENSSSSSVTTPYVIDYNNVIGNNKNVTSTIGGCATPGGVVTILHAGKAIPYVPGIPGPHTLGVGGSSYSSDEETPIELNIVEEDSDVESPSSSSLTSAESVGLRLPTLFSAETSRNNNNNNNNNNSQAFFNNRRHQKPVCTEVLLNASTNLKVPVKYEVHHQEEKKITLTLAHFEDSILEKLEQVDNSLLQKSASTANTNSSGSCMGVDSSNSEKNKFTRPTFLPLKPGTFAVKRISIGVSATLSLISPETPRPKKSYGQLYINGNAYTYLGMKCSTRVTYCTMHKSQPTYVLISPEHSKISMYSNWKQMSAESDAILPGVSTCKALGCYDSRHRQSVYTVAHGKLKDAVTHSFYWFNKSDPIEESKDQEQPTECNPALTIDEDTIESNLIPEEAGSRKGKSSESQLLNLTEHIEDGYQRKQITGAIFVDLSAAYDIVNHNRLSKKIYDLSKDFTKSEIENAIEKASKRHNKICDGGVESSDEYTYVRGRGRGRYKCLECGIRCKKPSMLKKHIRTHTNVRPYTCKHCIFSFKTKGNLTKHMKSKAHYKKCVDLGIIPVPTFPDGTPEDNCTISNNSRQDPSADDDWEEGEGCDEEEEGDEEEVDDEEDEAEDEEDDFEETKIDNNKRQLEREAVRTLLRLSEMTHQSVAEQYANAGLTSSKVRPYSYPYRHLSSPHLSSTAAHTPTLSLTSEQKEREKVSRNTGLAREFQPYIPDKLYCMDRNRCNYGSVSNTVGTLTHNLTNDLHEEFSNDLCTISSGLPMDLSNKNSTFKSSSHNDVTIYDNGSSSLTAYGGEASVLKRQPIIPISEILTPVSEPVLLATICSSMDKLPISSGFSTDVDAAATSDENVMFRAYIKERAMQDVRVKQQQRQYHFQHIKELDENTEFQLKYNLYNKAFQTGVILGNAGTRNNLSADSNMANDNSQKKNKRNFNYNIIHTATPTTTIANTLQNDLKTTKEFDIVTGDNRSFANNAAIEKRNSLNNVSSNNGIETSNVDDDQNDRSSLRDRQLSRSYVNEIKTTHADEILIQTDGKQSELMTLAHTASGMCKIKCNDVNNSNDNSTSARCNDDGNASDHGNPTTINTDNINADDNTNIGRHNNNNNNNNNNNNNVNQINNNNKILLSSAVTSKDSRSLKKLKVEFMPPSSGPSPKYASVLEDGRSKCEICNKIFTTPSQLRIHLNIHYFEKRFRCETCAVSFHTKAQLHKHLDDNSHRIKVSMNSSNGVSSSSNPRPFKCDDCSVGFRIPGHLAKHLRSKMHIMKLECLGKLPFGTYAEMDRRGMNMNDIDTTDCENSLESLKRIAENLLSLSEDNAELPISDKPLSSYHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-