Basic Information

Insect: Coronaproctus castanopsis
Gene Symbol: -
Assembly: GCA_032883995.1
Location: CM065053.1:177424764-177431563[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0064 1.8 10.7 0.2 1 23 284 306 284 306 0.93

2 12 0.00021 0.058 15.4 0.8 1 23 321 344 321 344 0.98

3 12 0.93 2.6e+02 3.9 0.1 2 13 397 408 396 410 0.84

4 12 0.45 1.3e+02 4.9 0.6 1 17 435 451 435 457 0.79

5 12 0.034 9.3 8.4 0.5 2 23 464 485 463 485 0.96

6 12 0.00032 0.087 14.8 1.4 1 23 491 513 491 513 0.96

7 12 0.032 8.8 8.5 3.3 1 20 519 538 519 542 0.79

8 12 0.0054 1.5 10.9 0.2 2 20 547 565 546 567 0.92

9 12 0.0076 2.1 10.5 1.1 2 23 650 671 649 671 0.97

10 12 0.00012 0.033 16.1 5.3 1 23 677 699 677 699 0.97

11 12 0.058 16 7.7 2.6 1 23 705 727 705 727 0.90

12 12 8.5e-07 0.00023 22.9 1.6 1 23 733 755 733 755 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0064	1.8	10.7	0.2	1	23	284	306	284	306	0.93
2	12	0.00021	0.058	15.4	0.8	1	23	321	344	321	344	0.98
3	12	0.93	2.6e+02	3.9	0.1	2	13	397	408	396	410	0.84
4	12	0.45	1.3e+02	4.9	0.6	1	17	435	451	435	457	0.79
5	12	0.034	9.3	8.4	0.5	2	23	464	485	463	485	0.96
6	12	0.00032	0.087	14.8	1.4	1	23	491	513	491	513	0.96
7	12	0.032	8.8	8.5	3.3	1	20	519	538	519	542	0.79
8	12	0.0054	1.5	10.9	0.2	2	20	547	565	546	567	0.92
9	12	0.0076	2.1	10.5	1.1	2	23	650	671	649	671	0.97
10	12	0.00012	0.033	16.1	5.3	1	23	677	699	677	699	0.97
11	12	0.058	16	7.7	2.6	1	23	705	727	705	727	0.90
12	12	8.5e-07	0.00023	22.9	1.6	1	23	733	755	733	755	0.99

Sequence Information

Coding Sequence: ATGGATATTACAGATTTTCCAGAAAAGTTATGTAGATTATGTTTGATGCCAACTCCTAGTACATTACTTTACGGATTGGACCACGCAAATCAAGAGTATTTACCGAATGATAGCGACGATTACGAAAAATATACTATATTggttaaagaagaaaacgaCCAAGATGAAGAGATAGATGAAGACAAACGTAAAAAACAAGAGGACAGACATAATAAAGAGATAGCGATCGAAGATATTACTTCGATCGGTTTATTTAATGATGACGGAGAAGACGGTGACGacgatttttataatacgtacGACGAGCATCTAAAGATAGAGACGATTATTAACGACGACGATAACGCCATTATCGAAGAGAATATTATCGTCGACGATGacaacgacgacgacgacggaATAAACATAACGGATAACGATCGAGCTAAACAACGTCCTCCTATCGAGCATTATTTAGACGATTATTTCACGgattattctattactactactactactactactactaatgctactactactaataccagtagtaataataataataataataatactaacgatACTTCGTATTTGTATACGAATAGAATGAAATTCGTTCTGTTCGAAGAGAACGGTAAGCCGTCGGACGTCGATTTGAATTTCGACGATTACGATCGAATCGACGCAGAAGTTAGTCAATTTTTATCGTCTTTAAAAAACGATCGTTATCAACTGGTTCGTCAATGTCGACGTTGTAAATCGTTATTCGTGGGCGAAGGTGATCCGTATTCGCACCTATGTAACGATACGGTAAATAACGATACGATTTATAATGACGGAACCGATAACGAATATTTCGTTCctttatatatgtgtacgtattgTAAACAAATATTCGCTAGTCTTTTTTTATTAGCTTTACACGCGGATCAACATCGAGACGTCGAACAACAACAATTATCGACGGATATTACGTCGTATACGTgcgtttattgtaattttatcttAGAAAacgaaactaatttaaaaaaacacgtaCGAACGCTTCATAAAGCGGAATACGTTAGCAGAAAATCCGATACAACTTATTactatcataataataaaaataagaataatcgtaataatcataataacaataatgataatgacgatgatgataataataataataataatagcgggGACGGCGTATATGTCGGCGATCAGTGCGACGTTTGCGGTAAGATTACTAATCGATTAGAACAACATAAACTATTTCACGTGATAGAAAATTTAGAAATCGATAAAATCGCCAATAAACAAGGTAGAAAAACTTGGCATACGTGCGACCAATGCGGTAAAAAAATACCGACCGAATACggattattatttcataaagcCGAGCATAGAAACGAAACTCACGTAACGTGCGAACAGTGCGGTTACCGTTCGGATAGTTTATCGGAATACGCGGTACATCATTCGAATCATACCGGCGAACGTACGTACGTATGTAACGATTGTCAAAAATGTTTTCAAACCAGATCGGCTATAAGCGATCACGTATTACTACATATGGAAGGTATGCGATATATGTGCGAAATGTGCGGTAAACGTTTTAAAACGTGTCGAGCGCACGCTCAACATAAATTGTTACAACATCGTCGCTATTTACGCTGCGTTAAATGTAATCGCGGTTTTTCGAACGCGGAAAAAATGCGAACTCATTACGAAATTTGTCTAGCTATCGGCGGTGGCgctagtaatagtagtaataggACGAAAGACGAACGAATTCGTaacgacgataacgataatttcAATACtggtggtagtagtagtagtagtagtagtagtaaatcTAATGAAGCCGTGCAACAGCAGCAGCGAGCCTATTGCAATATTTGTCGTTCGTACATTAAAAGTAATTCGGATATTACCATGTTATTTCATTACGCTAAACACGAAGGAAAAGAAGGTATACGTTGCACGGTATGCGACGTCATGTGTAAAAACGTGTACGCttataaaaatcacacgatGATACACAGCGAAGAACGACCGTTTTGTTGTTTACAATGCGATAAACGTTTCCGTACGAAAGGCTGTCTAGTACAACATATGTTAGTACACGGTAacgattataaatatacgtGCGATTATTGCGGTAAAAAGTCGAAAAAATTAACCACGCACATCAATCACGTAAATATTCACACCGATACGCGGCCTTATAGTTGTCCGGATTGTTCTAGACCGTTTCGACAATTAAGCGATATGAAGAAACATCGTAAGACGCATTTGAAGACGAAACATCCAGTCGAACAAAACGTATTAGCGGCCGGATTAGCCTTCGTACCGATTAGTTTAGAAATGAAAGAAGAACTAATGAACGCCGATAACGTTATCTtctaa
Protein Sequence: MDITDFPEKLCRLCLMPTPSTLLYGLDHANQEYLPNDSDDYEKYTILVKEENDQDEEIDEDKRKKQEDRHNKEIAIEDITSIGLFNDDGEDGDDDFYNTYDEHLKIETIINDDDNAIIEENIIVDDDNDDDDGINITDNDRAKQRPPIEHYLDDYFTDYSITTTTTTTTNATTTNTSSNNNNNNNTNDTSYLYTNRMKFVLFEENGKPSDVDLNFDDYDRIDAEVSQFLSSLKNDRYQLVRQCRRCKSLFVGEGDPYSHLCNDTVNNDTIYNDGTDNEYFVPLYMCTYCKQIFASLFLLALHADQHRDVEQQQLSTDITSYTCVYCNFILENETNLKKHVRTLHKAEYVSRKSDTTYYYHNNKNKNNRNNHNNNNDNDDDDNNNNNNSGDGVYVGDQCDVCGKITNRLEQHKLFHVIENLEIDKIANKQGRKTWHTCDQCGKKIPTEYGLLFHKAEHRNETHVTCEQCGYRSDSLSEYAVHHSNHTGERTYVCNDCQKCFQTRSAISDHVLLHMEGMRYMCEMCGKRFKTCRAHAQHKLLQHRRYLRCVKCNRGFSNAEKMRTHYEICLAIGGGASNSSNRTKDERIRNDDNDNFNTGGSSSSSSSSKSNEAVQQQQRAYCNICRSYIKSNSDITMLFHYAKHEGKEGIRCTVCDVMCKNVYAYKNHTMIHSEERPFCCLQCDKRFRTKGCLVQHMLVHGNDYKYTCDYCGKKSKKLTTHINHVNIHTDTRPYSCPDCSRPFRQLSDMKKHRKTHLKTKHPVEQNVLAAGLAFVPISLEMKEELMNADNVIF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -