Ccas022675.1
Basic Information
- Insect
- Coronaproctus castanopsis
- Gene Symbol
- MRPS31
- Assembly
- GCA_032883995.1
- Location
- CM065053.1:23212900-23274852[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2.2e-05 0.0059 18.5 0.2 1 23 10 32 10 32 0.98 2 19 0.00073 0.2 13.7 0.2 1 23 51 73 51 73 0.98 3 19 0.17 46 6.3 3.8 1 23 189 212 189 212 0.95 4 19 0.018 4.8 9.3 0.2 3 23 388 408 387 408 0.98 5 19 0.032 8.9 8.5 0.3 2 23 436 457 435 457 0.96 6 19 0.023 6.5 8.9 0.2 3 23 467 488 465 488 0.93 7 19 0.0034 0.94 11.6 0.3 1 23 493 516 493 516 0.92 8 19 0.0016 0.45 12.6 0.1 2 23 575 596 574 596 0.97 9 19 0.012 3.3 9.9 3.7 1 23 600 622 600 623 0.96 10 19 4.3 1.2e+03 1.8 0.1 2 23 727 750 726 750 0.87 11 19 0.25 69 5.7 0.4 2 23 819 842 818 843 0.91 12 19 0.00023 0.064 15.2 1.8 2 23 855 876 854 876 0.96 13 19 7.8 2.1e+03 1.0 0.4 1 23 885 907 885 907 0.93 14 19 4.5 1.2e+03 1.8 1.6 2 23 915 936 914 936 0.96 15 19 0.015 4.1 9.5 0.2 1 23 1029 1052 1029 1052 0.97 16 19 0.0078 2.1 10.4 1.1 1 23 1056 1078 1056 1078 0.98 17 19 0.014 3.8 9.7 0.1 1 23 1087 1109 1087 1109 0.96 18 19 0.0024 0.67 12.0 0.3 1 23 1117 1139 1117 1139 0.97 19 19 0.099 27 7.0 3.4 1 23 1146 1168 1146 1168 0.94
Sequence Information
- Coding Sequence
- ATGAAAACGCACGACAATCAAAAACCGTTTCAGTGTACCGTCTGCAATCGCGGTTATAATACGGCCGCTGCTCTTACGTCGCATATGCAAAATCATAAAAAATCGATCGATAACGCCGCTACGTCGTCATCTACGATTGCAGGCACGACATTCAGATGTTTGCAATGTTCGGACATTTTCTCGAAACCGGAAGATTTAcagGCTCACATGAACAGTCATCCTCAATCGGATACTAGTAGCGGCTCAACGGTCGGTAAAAGTCACAAAAATTCCTCGTCATCGATCGCTAAATATACTTCCACGTTTTGCGCTAAAGAAAATTTCACCACCGTCGAAACTCTGCAATTGCACGTACAGTCGTCTCACAaatcgATATTTAACCAAGATCTAAGCTCAATGGTCGTTACTAATGCCGCTACTTCTACTACTAGCGTACAAAGTAAATCTAAAactactaataacaataataataataataataatatcaagaACAATAATCATCTATCGCCGTTAGCATCGTCAGCCGCTTTCGGTGCTTCGGCTACTATACAACAACCGTCTTCGTATTTTTGCGAATTGTGCACCATGGAATTCGCTACGTTTCACGCTTTATACAAGCACACCCATTCGGTGCACTcagcgtataataataataacaataataataacggttatCATCGATACGGATTGCCGTCGGATTTAATTCACGAAGGCAAACTATACTGCATTTATTGCGCCACTCATTTCTTAACTCCGGCTTCGTTCGCTGAACATTATATTTTGTTCCACAGTCcgtatcatcatcaccatcaacATCTTCAACAACAACAACTACTACCGGAATTTCTATCGTCAAATATCGCCGTACCGCCGTTGATCGTTGCTCCCGAACAAGTGAAACCCACCGACTTATCGATCGCCACCAACggtaataacaacaataataataataattaccatcATCATAATCACAATAGAAAATTAACGACGACTAAACGAACGATTACAACGGTGGACGGTAACGAAGAATCCAGATCACCGTCGAGAAAAAAATCCTCAATCGATAATGTTACATCTCCCGGAAGTTCTTCCGGTACTGCAACCAATTCCGTTAGTTCATCGTCGGTACATTCGCATTACGATTACGCCGGAACGTTACTATGCAGTCAGTGTAACGCAGCGTTCGGAGATTTCGAATCGTTCAGAGCGCATATTAAACAACACATCGAAGAAAGCGGAAGCGGTTTATTAGGCGGATCGATCGCTTCGGAACATTTAAAACGGTCGTCCGCCGCGACGGAATTAATGTGTCCGCATTGCCGATCGATATTTTCATCGGTCGAAGAAATTAATCGGCACGTGGCTACGCATTTCTTGTCGACCGATACGGAATTCGGTTGCGCCAGTTGTAATAAACAATATCAGAAACCGGACGAATTACAAAAACATCTGATGGATATTCATGCGCATCATCTGTACAGTTGTACCATCTGTAACGAGATATTCAAGTCGAAAGTAACCATTCAGGTTCATTTTGCGGTGACGCATAGCGTTcaaacgaaaaattacaaatgcaCCGTATGTATTGCGTCAGACGCAACATTTCATTCGGAAATGGAATTTATGACGCACGTCAAGACAGTTCACGCTAGTGGTAATCCTTTACTAACTTCCGTATTTCAACCTGCTCGCAACGTCCCTTCGATCGTATCGCCAACTTTACAATGCACGATATGTAACTCTAGTTTCCCGACCGAATTAGATTTACAATTACACTTGGCTACTCACGGAAAACAATTTCAGTGCACGTTGTGTCCTCAATCGTTTCATATTGAATATCTGCTAGATAAGCACATGCAACAACATCATCAAAATACTAATCAGCTGGAGACGTCCATCTACgatgataaacatttaattaagaAAATGTACGACAGTCATTCGCCGATTACAACAACTTTAAATCGTGGCGTTAATTCACCCGGTTGCTCATCGAGAAATCAAAATCTCGTCAACAACGACATCATCAACGATAatcacattaataataataataataataataatattaaaaataataataacagcctgagcaataataataataatagtaataaaaattataacggcCAACTTACTGAAGACGAAACTAATAACCACAACACCCATACTACCACCTACTGCGATATTTGCGAAAAACAAGAATTTGTGGACGAAATGGAATTGGCAACTCATAAGAAATTAGTACATAACGTGAAGACTCAGTCGTCGAATCAAAAAatTACTAACACGGACGTAGGAAAAGACAACGAATCGAGCAAGAATGTGAAAAGTAATTCTAAACAACAAAGTCAAAAGTTTATTCAACAATCTAAAATTAAATCAGATACGTCGCGACACGCGATCGAACAAACCGACATCGTCGCTGCCGGTAGCAACAACGCGGCGACCATTTCTTGCGACGTTTGCGACAAACGAGATTTTGTAAACGAAGCTGAACTGCAGTCTCATAAAAAACTGGCCCATCACGCGAAAGTCAGTTCCCCCGGAAAGCTCAGTCTAAATTGCGCATATTGCAACGAAACGTGCAAATCTAGGAACGATTTGGAAGTTCACATGAAATCTCATTCGCACATTTCGACTGGTGGTAAACACAAATGTATTATTTGCGACGAAATGTGTCCGTCGGCGGCGATACTTGCCGAGCATAAACTTACCCACTGCAAGGTTCTGTCCGGGAAAACGTGCATGCATTGTAAAGGATCGATAAGTACCGAAGAAGAATTTTACTATCATATTCAACAACATAACGGTATTCAAACCAGCAATCAGAATAACGTTAACAACTGTTCGAATAGTCGAACGGCTAACGACGGTATGTCGAAATTGATATTACCGACCGTGTGCGTAATTTGTCGTCAAACTCTGGTCTCGGAAATGGAGGCGCAAATTCACGCTCGATTTCATTTGCACCATTCGACTGACGCGGTACCATGTTCGGTATGTTTTCAAACGGTCGACAAACAAGAATTGATCGTCGGAATTTGTCGCGAATGTTATCAAAGGCACGGTAAATCTTCGCCTTTCCGTTGTCCGGAGTgtcatttaaatttcgaaacCGGTACAGCTATCGAAGTACACTTGTCGACGGTTCATCGTAAATTGTATCAATGCCTAAAATGTCAGgTTTCGTTCGATAGCGAGAAAGAAATTCAACACCACGTGGCCACTCATTTGATGATTGACGGTTTGAACAGTCACGAATGTCGAATATGCCGTAGAGTGTTACCGACCCCGTTGCAGCTGCAAGCTCATCTAATCGAACACACATTCGCCGGCTGTTCTACCTTTACCTGTTACTTATGTAGTTCGGTATTTACTACGGCTCAAGGTTTGCAAACTCATATATTAGAACACGGTCTATCGGCCCGACCGTACGACTGTCCCAgatgtaaacaaaaatttttcttcactTCCGAACTGGAGCATCACAGTTATATTCATATGGAAGAAACGCTCAATCTAAACGGTGACgATTATCGTTATAAGTTTCGTCAAGAAAATGACGGAGCGAAAAAAGATTCAACTAGTAGAACTTCGTCCTCTAGTACGATACCGTTTGCCAACGTTATGGCGACCACTTTCCAACGTACTTCGTCGGAAGAATCGAAAAACGATCAAGATCGTTACGCGAATTTGCCAAAATTTAGACACgcgaaaaatttcgattttaaccAACAGTTGCAACAACAATTGAATACGTACAGTCATAATTTCGGCGGCAGACAATTGCCTATTAGTTCGTCGGCcattaaagaattaaataattcttcgatttttttaaataagcaaACGAATAATCAAGAATTGGAATCGATTACCGATACTACGATAAAAAAAGATTCTGATATTAAAACCGAAATCAAAGAAGAAGCTCTAGAAAGCGACGATGACGAACAAATAGACGTCGTAACTATGGCTAGACACGAACCCAAGAAACATTGCGTTTCTACTGTACGTCGTATTCCGCTCAGTAGGCGTAGTTTTGCAGTTACAACTAAATTGTTCGAGGAAGAGAAAGCATCTGGAATTGTCAGTAATGAGCAGACTGAGTTAAATGCTAAATCGGAACAGCCTGTTAAAAGTATTGATAAGAAAGAAGAAGCAGCTCGTAAAATACGAGACTTACTGCTGTCTATGAAAACgAGTGACTTCGATAAGCAGGCTAATGTAGATTTATCGAAACCCAGGGTTTATGATAAGAAGATACATTTAGAAACGTTAGAACGGGAAAAACGCGAACGagaagaaaaggaaaatcaGTCATTGGgAAATCGTCTCTCTAAAGCCGCGCATGAAGTTGCTAAATCATTAGGCGATAATGAAGAAAAGACAGAGCAGGAATTACTAGAAATATTCACACGTACCAATGATCAACGAAATGTGGATCTCTCGTCTTCCAAAATCGAACTAAATACACCGGAATCAGAAGAAAAAACTGTTAACATAAGTATAATTACGTTACGAGTTCAGATACTACAATTAGCCATAGAACACGCTCATTGTCAGACTATCTCCGGCGATTTGAACGAAATCCAATATATACTGGACATTGCTAAAGAAATTGGAACGCAGCACATACAATTAAAAGATTGTGCACATTTTCTACCTCAGACCACTCACCAGCAATTGCATCAATCAGGTCCATGCGAATTGATAGCCGGCATGAAAGTTGATATGACATCGTCGGAATCGTCAATACCATTAGAGCAAACACGAGCCTATCAAATCAAAAAGATGTTAATGAAGAAATCAGGCAAAGAAGATGAACTAAAAGAATTCTTTATATCTCGGAAACCCAGAAGGTATAGCAGTACGCAAATGGAAAAGGTCGATTTATTCGGAGAAACTCCGCTTGGAATATTCGatgttaaaaaattcgaaaaacaaTCGACTAATGAAACTATTTTGTCAACTTGGTCTAATTTGGCCGGTCGTGAATTGCGACTGAGTATCACGCAACCACCTGCTAACATATACGAACAGATGATGTTGTGGACGAATAAAGGAAAATTATGGCGCTTTCCCATCGACAATGAACAAGATTGGTTCGACGAGCAAAAGGTCGATTTCACCGAACACGTATTTTTGGAAAAACATTTGGAACCGTGGTGTCCAACAGATGGTCCTTTACGACATTTCATGGAATTAGTATGCGTAGGCTTATCGAAAAATCCGTATCTAACGGTGGACGAAAAGAAAGAGCATATACATTGGTACGAAGCTTATTTTCGcgataaagaagatatattAAAGCGGGCTGAAGTACCGACTGTTATAGAACAACGAGAAACTTCGATcgattaa
- Protein Sequence
- MKTHDNQKPFQCTVCNRGYNTAAALTSHMQNHKKSIDNAATSSSTIAGTTFRCLQCSDIFSKPEDLQAHMNSHPQSDTSSGSTVGKSHKNSSSSIAKYTSTFCAKENFTTVETLQLHVQSSHKSIFNQDLSSMVVTNAATSTTSVQSKSKTTNNNNNNNNNIKNNNHLSPLASSAAFGASATIQQPSSYFCELCTMEFATFHALYKHTHSVHSAYNNNNNNNNGYHRYGLPSDLIHEGKLYCIYCATHFLTPASFAEHYILFHSPYHHHHQHLQQQQLLPEFLSSNIAVPPLIVAPEQVKPTDLSIATNGNNNNNNNNYHHHNHNRKLTTTKRTITTVDGNEESRSPSRKKSSIDNVTSPGSSSGTATNSVSSSSVHSHYDYAGTLLCSQCNAAFGDFESFRAHIKQHIEESGSGLLGGSIASEHLKRSSAATELMCPHCRSIFSSVEEINRHVATHFLSTDTEFGCASCNKQYQKPDELQKHLMDIHAHHLYSCTICNEIFKSKVTIQVHFAVTHSVQTKNYKCTVCIASDATFHSEMEFMTHVKTVHASGNPLLTSVFQPARNVPSIVSPTLQCTICNSSFPTELDLQLHLATHGKQFQCTLCPQSFHIEYLLDKHMQQHHQNTNQLETSIYDDKHLIKKMYDSHSPITTTLNRGVNSPGCSSRNQNLVNNDIINDNHINNNNNNNNIKNNNNSLSNNNNNSNKNYNGQLTEDETNNHNTHTTTYCDICEKQEFVDEMELATHKKLVHNVKTQSSNQKITNTDVGKDNESSKNVKSNSKQQSQKFIQQSKIKSDTSRHAIEQTDIVAAGSNNAATISCDVCDKRDFVNEAELQSHKKLAHHAKVSSPGKLSLNCAYCNETCKSRNDLEVHMKSHSHISTGGKHKCIICDEMCPSAAILAEHKLTHCKVLSGKTCMHCKGSISTEEEFYYHIQQHNGIQTSNQNNVNNCSNSRTANDGMSKLILPTVCVICRQTLVSEMEAQIHARFHLHHSTDAVPCSVCFQTVDKQELIVGICRECYQRHGKSSPFRCPECHLNFETGTAIEVHLSTVHRKLYQCLKCQVSFDSEKEIQHHVATHLMIDGLNSHECRICRRVLPTPLQLQAHLIEHTFAGCSTFTCYLCSSVFTTAQGLQTHILEHGLSARPYDCPRCKQKFFFTSELEHHSYIHMEETLNLNGDDYRYKFRQENDGAKKDSTSRTSSSSTIPFANVMATTFQRTSSEESKNDQDRYANLPKFRHAKNFDFNQQLQQQLNTYSHNFGGRQLPISSSAIKELNNSSIFLNKQTNNQELESITDTTIKKDSDIKTEIKEEALESDDDEQIDVVTMARHEPKKHCVSTVRRIPLSRRSFAVTTKLFEEEKASGIVSNEQTELNAKSEQPVKSIDKKEEAARKIRDLLLSMKTSDFDKQANVDLSKPRVYDKKIHLETLEREKREREEKENQSLGNRLSKAAHEVAKSLGDNEEKTEQELLEIFTRTNDQRNVDLSSSKIELNTPESEEKTVNISIITLRVQILQLAIEHAHCQTISGDLNEIQYILDIAKEIGTQHIQLKDCAHFLPQTTHQQLHQSGPCELIAGMKVDMTSSESSIPLEQTRAYQIKKMLMKKSGKEDELKEFFISRKPRRYSSTQMEKVDLFGETPLGIFDVKKFEKQSTNETILSTWSNLAGRELRLSITQPPANIYEQMMLWTNKGKLWRFPIDNEQDWFDEQKVDFTEHVFLEKHLEPWCPTDGPLRHFMELVCVGLSKNPYLTVDEKKEHIHWYEAYFRDKEDILKRAEVPTVIEQRETSID
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -