Basic Information

Insect: Coronaproctus castanopsis
Gene Symbol: -
Assembly: GCA_032883995.1
Location: CM065052.1:131342229-131347802[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00028 0.077 15.0 0.9 1 23 109 132 109 132 0.89

2 12 0.022 6 9.0 0.6 1 23 163 186 163 186 0.93

3 12 0.35 98 5.2 5.6 1 23 196 220 196 220 0.96

4 12 0.0022 0.61 12.2 0.6 1 23 828 851 828 851 0.97

5 12 6 1.7e+03 1.3 0.5 1 8 881 888 881 890 0.89

6 12 0.074 20 7.4 1.5 1 23 910 933 910 934 0.93

7 12 6.2e-08 1.7e-05 26.5 1.7 1 23 951 974 951 974 0.98

8 12 0.00014 0.038 15.9 0.3 1 23 980 1002 980 1002 0.98

9 12 0.0002 0.056 15.4 0.3 1 23 1028 1050 1028 1050 0.98

10 12 2.7e-05 0.0073 18.2 0.2 1 23 1056 1078 1056 1078 0.98

11 12 0.00016 0.044 15.8 0.8 1 23 1086 1108 1086 1108 0.96

12 12 4.1 1.1e+03 1.9 0.7 6 23 1118 1136 1116 1136 0.72

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00028	0.077	15.0	0.9	1	23	109	132	109	132	0.89
2	12	0.022	6	9.0	0.6	1	23	163	186	163	186	0.93
3	12	0.35	98	5.2	5.6	1	23	196	220	196	220	0.96
4	12	0.0022	0.61	12.2	0.6	1	23	828	851	828	851	0.97
5	12	6	1.7e+03	1.3	0.5	1	8	881	888	881	890	0.89
6	12	0.074	20	7.4	1.5	1	23	910	933	910	934	0.93
7	12	6.2e-08	1.7e-05	26.5	1.7	1	23	951	974	951	974	0.98
8	12	0.00014	0.038	15.9	0.3	1	23	980	1002	980	1002	0.98
9	12	0.0002	0.056	15.4	0.3	1	23	1028	1050	1028	1050	0.98
10	12	2.7e-05	0.0073	18.2	0.2	1	23	1056	1078	1056	1078	0.98
11	12	0.00016	0.044	15.8	0.8	1	23	1086	1108	1086	1108	0.96
12	12	4.1	1.1e+03	1.9	0.7	6	23	1118	1136	1116	1136	0.72

Sequence Information

Coding Sequence: ATGAGTACAAAGCGCTTGATAAATACGACCACAAATAGTACAGCTGCAAGgacGGATTATTACGACGACGGACGATTATCGTCGTTTCGCCTTAATTTATCGAAGCTCGGATTGTCGAAAATTTGGGACCGACTTCTATTACCGACCGATAAACGTAAATATCGCGAACGTATTTTCAAATATCTAAAATCGTTGCATCGTATAAATTCGAAACCGTTTCGAGGATTTAAAGATCGGGAACACAGCGACGTCGTCGAAGATGAACATGTTTTGGTGATAAACGATGGACGTTCGTTAACGGAGGAGGAAGACGGTAAACGGttgtatttatgtaaaaaatgttcCGAAGTATTTACTAGCAAAAAATATCTCTTACGACACGTGGTAAACGTTCATAACGTTAATGTACGTTCTCGGACGACTTTTAAATGTAATCCGACGAAACGGAGGAAAAAATCGtcgaaaaaattcgaaaatgttCGAAGTTTCCCGTGCGAAAAATGCGAAATGATTTTTTGCAGCGGTAAATCGTTGTTCGAACATATCGTCAACGTTCACAATTGGAACGTCGTTAATAGCGGCGAATTTCGCTGCGAAAAATGTGATAATACCGTCTTCTATAATTGTAGATCTTTGTTAAATCATATTCAAAATTGTCATACGTGGGAATGTTATTACTCTAGTACGGTAATAAAACTCGCATCTCCGTACAGATTGAGTAATTCTAACAATGAAACTGCTCGATATGTAgctcgtaatagtaataataacggaaaTACGAATGACGATTGTAAAAGCGACGACGATGAGACGTACGTAGATGGAAATGTTTGTTCGAAAGACGAATTAATCGGTTATAATTATAAGAAGAGTGCGAATAACGAATACGTTAATAGTAAATCAACGATTGATTACTCGCAGCAGTTCGCGGATGAAATTAACGATTCGGACAATGATAAATACGACGATGATTATTCAATCGTAGAtagaaattttatcgaaaaaaatcgattcgtTAATTCGACTACTAGTAACGACGAAAGTAATCGTGAAAAAACGATTTACACGACATTTCGcgacaaaattaaagaaaccgTTCCTAGGACGACAATTGATTTTAACGACCAAACTATCGAGAATGAAGATTCATCGAATAACGAATCGGTTAATTCTAGTCACGGTAGCATTGAAATTGTTCGTCCTTACACGGCATTTCATTCGAATTATGATAACGAATTCGTTAGttttaacgatgataataatgacgtTGAAATATTTTCCGACGAACTCGAACATTTAAACGACAGACTTAACAATGACGAACAAGTTATTGAAATCGAATATAATAAGAAGCTCTCGATTGGTAACGACGATAACGTTGAAATAGTTCACGCTTACGCGGTATTTccggatgaaattaaaaatttcgacgaCGGCTCGACTGATTTTAATGACGAGCTTAATGAGAATATGATCGAAGATTTGAATAATGTACACGTTACTTCTGACGATAATAACGACAACGTTGAAATAGTTCACGCTTACGCGGCGTTTCCGGATAATGACGGGTCGACTGATTTTAATGACGACGATGACCAGACTAATGAGAATACCATCGAacattcgaataataataataataataataataataataataataataataataatgacaacgttgaaatattttcggatgaaattaaagatttaaacGATAGCTCGACTAGTAGTTTTAACGACGATAAACAGATTATTGCAAGCGAAGTAATCGACGATTTTAATAAAGAGCTCGTTAGTTCTAACGACGATAGCGGTAATGTTGAAATAGTTCACGCTTACGAAGCCTTTTCGTACGAAATCGAAGATTCCTACGATACTATTCGGACGGATTTTAACGGAATCGAAGATTCGAACGATGAATCGTCGATTACCGACGATGAGACGACTTTACGATCGGcgaatgaaattaaagataGTTCTGATAAACGTAACGAGAGCCGATCTGCCGACGACGATAACGCGACGGCGGACGATTTTCGTACGGAAGGAGACGGCCAATTAAAACTAAACGACGATTACGACACCGTCTTCGAGTACGATTGCAGTTTAAATAACGAACCCGCCATTAACGAAGATGAACATTTTTCGATTAGTAATACGAACGAGTATTATCGCGTTCGCAATGACGATGTTAATGATAATGTTATAGTAACGACTAAACGTCTGGAAGGAAAGTTTGTTTGTAAAAGCGTTCCATGTAACAGTAGACAAACGACGGTTAACGAGAATAGATGTAGCGAAATTTCATCGATCAACTCTGAAAAcgaattaataacgataaatcatCATCAAGCGAACGAAACgaatgattatgatgatgatgataataataatgatactagtaataataataatgatgatagtagtagtaaccttaataataataataagaagaaaaacgGTTTAAGGGTAGTTAATTTTCGTTGCGAACGTTGCGATATGAATTTCATTAACATGACGACTTTATTAAATCATCGATTAATGGTGCATGGTATGGCGATCGACGAACAGTATCGATTTTTAAACGCGAATCGCCGTACCGATGAAAACGATCGTTACACGATTAAGAATAAATTCTACAAATGCGACATCTGTCATCAGATAGTCGAAGGCGGTccgattaaaatgaaaattcacACGTTAGCTCATTACGGTAAACGAAGATACGAATGCGAACTATGCGATAAAGGATATAATTGGGCGACCGATTATAGACGTCATAAACTAAATCGTCATCATATAAAACTCGATAATCATTTCGCCTGGTCTTCATCTTCGTCGTCTTCTTATCAATGCGATAAATGCGGCGAAATTTTCAAACGTAATTACTATCTTAATCGTCATATGAAAATGTTACACGACAATTCGCGTACTTTCATCTGCACGGTATGCGATCTCGTACTCGCAGATAAGTACGATCTAAGTCGACATAGGAAATCGCATAGGAAAAAGAAACCGCCCAAATTATTAAAAGGCAAAACTGTCCCTAATAATAAGCGATCGTCTTCGTCTTCTTCTTACGTATGTCACGTTTGCGGTAAAATCGTTAGTACGGCTGTTCGTTTAAAGTATCATTTGCTCATTCATACGGGCGATAAACGATACGAGTGTCGCATTTGCGGTCGAAAATATTACGCTCCGTCCGCTTTACGTAAACACGCGCGTATTCACGCCGACGATGATAAATTATTACACGCCTGTCCGATATGCGATAAGAAATTTCCGACCGGTTGGAGATTTAAAAAACACGTTCGAATTCATTCGGAACAACCTCGTTCGAAATTACAATGCGATTTTTGCACTCGTAAATACGTCGACGTGGAACAACACGTTAAAACACGTCATCCGCAACAGTATCAACAACAACTACTAGTATCGTCGTCGTTGGAACAGAAAATCGAAttgtag
Protein Sequence: MSTKRLINTTTNSTAARTDYYDDGRLSSFRLNLSKLGLSKIWDRLLLPTDKRKYRERIFKYLKSLHRINSKPFRGFKDREHSDVVEDEHVLVINDGRSLTEEEDGKRLYLCKKCSEVFTSKKYLLRHVVNVHNVNVRSRTTFKCNPTKRRKKSSKKFENVRSFPCEKCEMIFCSGKSLFEHIVNVHNWNVVNSGEFRCEKCDNTVFYNCRSLLNHIQNCHTWECYYSSTVIKLASPYRLSNSNNETARYVARNSNNNGNTNDDCKSDDDETYVDGNVCSKDELIGYNYKKSANNEYVNSKSTIDYSQQFADEINDSDNDKYDDDYSIVDRNFIEKNRFVNSTTSNDESNREKTIYTTFRDKIKETVPRTTIDFNDQTIENEDSSNNESVNSSHGSIEIVRPYTAFHSNYDNEFVSFNDDNNDVEIFSDELEHLNDRLNNDEQVIEIEYNKKLSIGNDDNVEIVHAYAVFPDEIKNFDDGSTDFNDELNENMIEDLNNVHVTSDDNNDNVEIVHAYAAFPDNDGSTDFNDDDDQTNENTIEHSNNNNNNNNNNNNNNNNDNVEIFSDEIKDLNDSSTSSFNDDKQIIASEVIDDFNKELVSSNDDSGNVEIVHAYEAFSYEIEDSYDTIRTDFNGIEDSNDESSITDDETTLRSANEIKDSSDKRNESRSADDDNATADDFRTEGDGQLKLNDDYDTVFEYDCSLNNEPAINEDEHFSISNTNEYYRVRNDDVNDNVIVTTKRLEGKFVCKSVPCNSRQTTVNENRCSEISSINSENELITINHHQANETNDYDDDDNNNDTSNNNNDDSSSNLNNNNKKKNGLRVVNFRCERCDMNFINMTTLLNHRLMVHGMAIDEQYRFLNANRRTDENDRYTIKNKFYKCDICHQIVEGGPIKMKIHTLAHYGKRRYECELCDKGYNWATDYRRHKLNRHHIKLDNHFAWSSSSSSSYQCDKCGEIFKRNYYLNRHMKMLHDNSRTFICTVCDLVLADKYDLSRHRKSHRKKKPPKLLKGKTVPNNKRSSSSSSYVCHVCGKIVSTAVRLKYHLLIHTGDKRYECRICGRKYYAPSALRKHARIHADDDKLLHACPICDKKFPTGWRFKKHVRIHSEQPRSKLQCDFCTRKYVDVEQHVKTRHPQQYQQQLLVSSSLEQKIEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -