Ccas027793.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Coronaproctus castanopsis
Gene Symbol
MAZ
Assembly
GCA_032883995.1
Location
CM065053.1:92202556-92204844[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 2.4 6.7e+02 2.6 10.2 1 23 36 58 36 58 0.94
2 16 0.0019 0.51 12.4 3.2 1 23 64 86 64 86 0.97
3 16 0.00034 0.093 14.7 0.5 1 23 148 170 148 170 0.98
4 16 5.4e-06 0.0015 20.4 0.9 1 23 180 203 180 203 0.94
5 16 3.6e-06 0.00098 20.9 0.2 1 23 242 264 242 264 0.98
6 16 3.2e-05 0.0089 17.9 2.7 1 23 270 292 270 292 0.96
7 16 8.2e-08 2.3e-05 26.1 1.2 1 23 319 341 319 341 0.97
8 16 0.011 2.9 10.0 1.2 1 23 347 369 347 369 0.92
9 16 8.8e-08 2.4e-05 26.0 0.7 1 23 377 399 377 399 0.98
10 16 3.2e-06 0.00087 21.1 2.7 1 23 405 427 405 427 0.97
11 16 1.9e-05 0.0052 18.7 2.4 1 23 459 482 459 482 0.96
12 16 0.023 6.5 8.9 6.2 1 23 489 512 489 512 0.91
13 16 0.0015 0.41 12.7 2.8 2 23 519 541 518 541 0.94
14 16 8.9e-05 0.024 16.6 2.0 1 23 547 569 547 569 0.96
15 16 0.0042 1.2 11.3 5.1 1 21 575 595 575 596 0.94
16 16 0.02 5.5 9.2 4.3 1 23 603 626 603 626 0.95

Sequence Information

Coding Sequence
atggaATCGTCtatagaaaatgaagaaaaaacgaaaCCGTTACTTATCGAACGTGTAAACGGTCACCGTTACAACAAAACGTCGTTGGCTGTTTTAGATGATTTTTTTCATTGCGATACTTGTCACAGACGTTACACGCTACGGAAATCTCTAGTTCGGCATTGCAAAAAGCATTTATCGGCGAAGCCGTATTCTTGTTATTATTGCGGTAAACTATTTACCGaacattataaattactatGGCACGCTCGCTTTCATAAATCGGAAAATGATTTTCAggaaaaaattcttttaatgcaATCGGCGAAGGATATCGTAGCCGCGACTGATTTATTTACTAAGGTAACATCATCATCGTTAACGCAATCATTTTTACCTGCGtcatcgaataataataataataataatgatactaatattaatgataataaaaataaaacattcccGTGTCCCGAATGCGGAAAATTGTTCCTTCATAGACGTAACATCGCGCGAcatattaaaatacataaaagaaGTCTTCTGGAATTCGGTTATTTCAATTGTATGTATTGCGATCGAGTTTTCAAACAGAAAGATGATTTAAAAGAACATTTAGAATACGATCATCGTCAAATGATAGAAAGATTAAATAACGACGAAATAATAATGGATAGTTTGTTgtctgaattatttttaaataattataatagtaacgATAACGGCGATAATAGCGAATGTCAATATATTTGCGACGTTTGTAAGAAACCGTTCGCGCGAAAAGATACATTAGCCACTCACGAACGTATACACAGAAATGAACGACCGTTCGCCTGCGACAAATGCGACAAAACGTTCAAAATTAAAGGACACCTGAGTCGACACGCTAAACAACACAAAGACGATCTTAAGTCGTTTATATTGcagaataataacaataataataatagtattgataataatcgtaaaaataatttcgtttgtAAAATTTGCGACAAAATGTTCACGCGAAAATCTTCCTTAATTAAACATCGAATTTTACACAGCGATGTACGACCGTTCGCTTGCGACAAATGCGACAAAACGTTTAAACTTATCGAATACCGAAATCAGCACGCTAAACAACACGAAGATGGCAATAAGTCGTCGTATGTTTGTCAAATTTGTAACAGAAGTTTCGCGCGAAAAGATACTTTAAACACTCATCTACGTATACACAGGAACGAACGACCGTACGCTTGCGACAAATGCGACAAAACGTTCAAAATGAAAGCACACCTGACGCGACACGCTAAACTACACAAAGACGATCTTAAGTCGTTTATATtgcagaataataataataataataatagtagtaataataataatttagttggAATCGATGTACAACTATTCGCTTGCGACAAATGCGGCGAAACATTCCGAATTAAAGAGCATCTTAGTCGACATTACAAACGAGAACacgaaaacgattttaaaacttttacgTGCAAACATTGTAGTCGACATTTTGACGGTAAATCGACGTTTTTGAGGCATTTCTCCGAAGAACACGCCTTAGATAAAATTAGTCGATGTAAAATTTGTCGACGAAATTTCCATACTCGGTCAGATATGATCCGTCACTTGGAAAACGAACACGCTAATTCGAGTTGTTACGTGTGCGCTTATTGTTACAAACgttatagtaataaatatttcctaACTAAACACTTGGAAGGACACGTTAATCGGACGGATTTTTTCTGCCGTCATTgtcataaatatttcaaattagaaAGTCATTTACTCGACCATATGAAAGTGGATCCGGATGAAAGACCGTTCGTTTGTACGATTTGTTCGAAACGATTCAAACTAAATATCCATCTTAAGTTTCATACGAAATCATCACACGTCACAACAGTCGACCGTTCAGTTCGGTACGCTGGCAATTCCATTCGAAATATCCCATCGAAACGGCATTTAAATACGGATCGTCGGTTTTTCCGCGCGGATAACggtagtaatattaattctatcaaagatactactattactaccaAAGATACTGCTATTACTACCAAAGATACTGCTACTACTACCAAGGATACTGCTATTACTACCAAAGATACTGCTATTACTACCAAAGATACCGCTATTACTACCAAAGATACTGCTATTACTACCAAAGatactactattattaccaAAGATACTactagtagtaatagtagtagtaatactGTCGATTGCAAAGAGGAATTACTATCAGAGGAAGAGTATCTGGCAGTTTTATATCCGATATGTATAGTTAGTACAATTTAG
Protein Sequence
MESSIENEEKTKPLLIERVNGHRYNKTSLAVLDDFFHCDTCHRRYTLRKSLVRHCKKHLSAKPYSCYYCGKLFTEHYKLLWHARFHKSENDFQEKILLMQSAKDIVAATDLFTKVTSSSLTQSFLPASSNNNNNNNDTNINDNKNKTFPCPECGKLFLHRRNIARHIKIHKRSLLEFGYFNCMYCDRVFKQKDDLKEHLEYDHRQMIERLNNDEIIMDSLLSELFLNNYNSNDNGDNSECQYICDVCKKPFARKDTLATHERIHRNERPFACDKCDKTFKIKGHLSRHAKQHKDDLKSFILQNNNNNNNSIDNNRKNNFVCKICDKMFTRKSSLIKHRILHSDVRPFACDKCDKTFKLIEYRNQHAKQHEDGNKSSYVCQICNRSFARKDTLNTHLRIHRNERPYACDKCDKTFKMKAHLTRHAKLHKDDLKSFILQNNNNNNNSSNNNNLVGIDVQLFACDKCGETFRIKEHLSRHYKREHENDFKTFTCKHCSRHFDGKSTFLRHFSEEHALDKISRCKICRRNFHTRSDMIRHLENEHANSSCYVCAYCYKRYSNKYFLTKHLEGHVNRTDFFCRHCHKYFKLESHLLDHMKVDPDERPFVCTICSKRFKLNIHLKFHTKSSHVTTVDRSVRYAGNSIRNIPSKRHLNTDRRFFRADNGSNINSIKDTTITTKDTAITTKDTATTTKDTAITTKDTAITTKDTAITTKDTAITTKDTTIITKDTTSSNSSSNTVDCKEELLSEEEYLAVLYPICIVSTI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
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80% Identity
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