Basic Information

Insect: Coronaproctus castanopsis
Gene Symbol: -
Assembly: GCA_032883995.1
Location: CM065053.1:190479666-190481366[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.23 64 5.8 0.1 8 21 47 60 39 61 0.88

2 16 0.00028 0.076 15.0 1.6 1 23 68 91 68 91 0.98

3 16 0.0012 0.33 13.0 1.6 1 23 99 121 99 121 0.98

4 16 0.0025 0.68 12.0 6.7 1 21 127 147 127 150 0.96

5 16 0.00027 0.075 15.0 6.1 1 23 158 180 158 180 0.95

6 16 0.00079 0.22 13.6 7.7 1 21 186 206 186 209 0.94

7 16 2.2e-05 0.0062 18.4 0.5 1 23 217 239 217 239 0.98

8 16 0.0021 0.58 12.2 8.2 1 21 245 265 245 268 0.93

9 16 5.1e-07 0.00014 23.6 0.4 1 23 276 298 276 298 0.98

10 16 0.0008 0.22 13.6 6.0 1 23 304 327 304 327 0.97

11 16 2.9e-07 8e-05 24.4 1.7 1 23 335 357 335 357 0.96

12 16 0.00011 0.029 16.3 5.4 1 23 363 386 363 386 0.98

13 16 3.8e-08 1.1e-05 27.1 1.2 1 23 394 416 394 416 0.98

14 16 7.9e-05 0.022 16.7 6.6 1 20 422 441 422 442 0.97

15 16 0.00021 0.059 15.4 1.1 1 23 453 475 453 475 0.98

16 16 0.00011 0.029 16.3 8.5 1 21 481 501 481 504 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.23	64	5.8	0.1	8	21	47	60	39	61	0.88
2	16	0.00028	0.076	15.0	1.6	1	23	68	91	68	91	0.98
3	16	0.0012	0.33	13.0	1.6	1	23	99	121	99	121	0.98
4	16	0.0025	0.68	12.0	6.7	1	21	127	147	127	150	0.96
5	16	0.00027	0.075	15.0	6.1	1	23	158	180	158	180	0.95
6	16	0.00079	0.22	13.6	7.7	1	21	186	206	186	209	0.94
7	16	2.2e-05	0.0062	18.4	0.5	1	23	217	239	217	239	0.98
8	16	0.0021	0.58	12.2	8.2	1	21	245	265	245	268	0.93
9	16	5.1e-07	0.00014	23.6	0.4	1	23	276	298	276	298	0.98
10	16	0.0008	0.22	13.6	6.0	1	23	304	327	304	327	0.97
11	16	2.9e-07	8e-05	24.4	1.7	1	23	335	357	335	357	0.96
12	16	0.00011	0.029	16.3	5.4	1	23	363	386	363	386	0.98
13	16	3.8e-08	1.1e-05	27.1	1.2	1	23	394	416	394	416	0.98
14	16	7.9e-05	0.022	16.7	6.6	1	20	422	441	422	442	0.97
15	16	0.00021	0.059	15.4	1.1	1	23	453	475	453	475	0.98
16	16	0.00011	0.029	16.3	8.5	1	21	481	501	481	504	0.95

Sequence Information

Coding Sequence: ATGTCCGATTGTCGGTTAACGACGAAAACGTGCAAAAATTTTCACCGAAATTTTGAACGTTCTGACAATCTTAAAAGAAACGTCTGCGATAGTAATTGTAGCGATGATAATAAACCGTTCGTTTGTAACGCTTTTCAGAAATCTTTCCCTTCGAACACCAGATTAAAAAGACATAGGCGCATTCGTACCAACGAACGATCGTTTAAATGTTCGTTTTGCGATCAATTATTCAAGTATCGCAATAACGTGCAGGTACATATCAATAAGGTACATTGCGACAAATCCGTTATACGTTATGATTGCGCTTATTGCCAGAAACGGTTCGTGGAACGTCGTTGCATCATTAGTCATATACGCGTTCATACCAGCGAGAAACCGTTCAAATGCCATCATTGCGATAAATATTTCATTGCAAAAAATTATCTACTACGCCATATTAAATGTGTACACTTACCACAACCTGTTAAACCGTTCTTATGCTCGTATTGTGATAAAGGTTTTTATAAATCAACTCATCTGGAGAGTCACCTTTGTAAGCACACTGGCCAGAAACTGTTCAAATGCCGTAATTGTGATAAATGTTTCAGCGTGAAGAGAAATCTATTGCGCCATAAGAAATGCGTACACTTCTTGCAAAATGTTAAATCGTTCATATGCTCGTATTGCGATAATCAGTTTAATGATTTAACCCAACTGGAAATTCACGTTCGTACACATCCCCCTGAAAAACTGTTTTTATGCCATCATTGCGATAAATGTTTCAATGCGAACAATAATCTACTACGCCATATTAAATGTGTACACTACccacaaaattttaaatcgttcgcATGCTCGTATTGCGATAAAGCTTTTTATAGCATAAGTGATCTCAAAATTCACGTTCGTACACATACCGGTGAGAAACCATTCAAATGCCATCATTGCGTTAAATATTTCAGTGCGAAGAATTATCTACTACGCcatattaaatatgtacacTTACCGCAACCTGTTAAACCGTTCTTATGCTCGTATTGCGATAAAGGTTTTTATCAATTAAGTCATCTGGAAGTTCACATTCGGACGCACACCGGTGAAAACCCATTCAAATGCCGGCATTGCGATAAATGTTTCCGCGCGGAAACGAATCTACTGTACCATATTAAATCCGTACACTTCCCACAAAATGTTAAATCGTTCGTTTGCTCGTATTGCGATAAAGGTTTTTATAGCACAAGCAATCTCAAAATTCACATTCGTACACATACCGGCGAGAAACCGTTCACATGCAGTCATTGCGATAAATGTTTCAGAACGAAAAATTGTCTACTACGCCACATTGGATGCATACACTTACCGCAAAATGTTAAACCGTTCATATGCTCGTATTGTTATAAAGGTTTTTATTATGTAACTTATCTGGAAGATCACGTTCGTACACATACCGGCGAGAAACCGTTCACATGCAGACATTGCGATAAATGTTTCAGAACGAAAAATAGTCTACTACGCCATATTAAATGCGCACACTTAAAATGTTAA
Protein Sequence: MSDCRLTTKTCKNFHRNFERSDNLKRNVCDSNCSDDNKPFVCNAFQKSFPSNTRLKRHRRIRTNERSFKCSFCDQLFKYRNNVQVHINKVHCDKSVIRYDCAYCQKRFVERRCIISHIRVHTSEKPFKCHHCDKYFIAKNYLLRHIKCVHLPQPVKPFLCSYCDKGFYKSTHLESHLCKHTGQKLFKCRNCDKCFSVKRNLLRHKKCVHFLQNVKSFICSYCDNQFNDLTQLEIHVRTHPPEKLFLCHHCDKCFNANNNLLRHIKCVHYPQNFKSFACSYCDKAFYSISDLKIHVRTHTGEKPFKCHHCVKYFSAKNYLLRHIKYVHLPQPVKPFLCSYCDKGFYQLSHLEVHIRTHTGENPFKCRHCDKCFRAETNLLYHIKSVHFPQNVKSFVCSYCDKGFYSTSNLKIHIRTHTGEKPFTCSHCDKCFRTKNCLLRHIGCIHLPQNVKPFICSYCYKGFYYVTYLEDHVRTHTGEKPFTCRHCDKCFRTKNSLLRHIKCAHLKC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -