Ccas034685.1
Basic Information
- Insect
- Coronaproctus castanopsis
- Gene Symbol
- ZBTB2
- Assembly
- GCA_032883995.1
- Location
- CM065053.1:190432886-190434430[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.00088 0.24 13.4 1.4 1 23 13 35 13 35 0.97 2 16 0.00016 0.045 15.7 6.2 1 21 41 61 41 64 0.96 3 16 8.1e-06 0.0022 19.8 2.7 1 23 72 94 72 94 0.98 4 16 0.00037 0.1 14.6 4.8 1 21 100 120 100 123 0.96 5 16 8.8e-06 0.0024 19.7 0.4 1 23 131 153 131 153 0.98 6 16 6.5e-07 0.00018 23.3 1.7 1 23 159 181 159 181 0.98 7 16 0.0067 1.8 10.7 9.8 1 21 187 207 187 210 0.92 8 16 2.7e-06 0.00073 21.3 5.0 1 23 218 240 218 240 0.98 9 16 0.00037 0.1 14.6 4.2 1 21 246 266 246 269 0.96 10 16 3.6e-07 9.9e-05 24.1 0.8 1 23 277 299 277 299 0.98 11 16 6.5e-07 0.00018 23.3 1.7 1 23 305 327 305 327 0.98 12 16 2.6e-05 0.0072 18.2 7.9 1 21 333 353 333 356 0.96 13 16 3.1e-06 0.00085 21.1 5.5 1 23 364 386 364 386 0.98 14 16 0.00037 0.1 14.6 4.8 1 21 392 412 392 415 0.96 15 16 0.00071 0.2 13.7 9.5 1 21 451 471 451 474 0.95 16 16 4.1e-07 0.00011 23.9 3.2 1 23 482 504 482 504 0.98
Sequence Information
- Coding Sequence
- ATGAATAAGGTACATTGCGATGAATACGTTAAATGTTATGATTGCGCTCATTGCGGGAAACGGTTCCTGCAACGTCGTTACATCATTAGTCATATTCGTGTTCATACCAGGGAGAAACCGTTCAAATGCCATCATTGCGATAGAGGTTTCAACGCAAAGTATAACCTACTACGCCATATTAAATGCATACATTACCCACAAAATGTTAAATCGTTCGTATGCTCGTATTGCGATAAAGGTTTTTATAAATCAACCCATCTGGAGGTTCATCTTTCTAAGCACACTGGCCAGAAACCATTCAAATGCCGTCATTGCGATAGAGGTTTCAACGCGAAGTATAACCTACTACGCCATATTAAATGCATACACCACCCACAAAATGTTAAATCGTTTGTATGCTCGTATTGCGATAAAGATGTTTATAGCAGAGGTGATCTCAAAATTCACGTTCGTACACATACCGGCGAGAAATCGTTCATATGCTCGTATTGCGATAAACGTTTTTACTATTCAAGTAAGCTGGAAATTCACGTTCGAACGCATACTGGCGAGAAACCGTTCAAATGCAGTCATTGCAATAAATGTTTTAGTTCAAAAGCGAATCTACTATGCCATATTAAATGCATACATTACCCACAAAATGTTAAATCGTTCGTATGCTCGTATTGCGATAAAGGTTTTTATCAATTAAGTCATCTCAAAATTCACCTTTGTACACATACCGGCGAGAAACCATTCAAATGCCTTCATTGCGATAGAGGTTTCAACGCGAAGTATAACCTACTACGCCATATTAAATGCATACACCACCCACAAAATGTTAAATCGTTTGTATGCTCGTATTGTGATAAAGATTTTTATAGCAGAGGTGATCTCAAAATTCACGTTCGTACACATACCGGCGAGAAACTGTTCATATGCTCGTATTGCGATAAACGTTTTTACTATTCAAGTAAGCTGGAAATTCACGTTCGAACGCATACTGGCGAGAAACCGTTCAAATGCAGTCATTGCAATAAATGTTTCAGTTCAAAAGCGAGTCTACTACGCCATATTAAATGCATACATTACccacaaaattttaaatcgttcgtATGCTCGTATTGCGATGAACGTTTTTATCAATCAAGTCATCTCAAAATTCACCTTTGTACACATACCGGCGAGAAACCATTCAAATGCCGTCATTGCGATAGAGGTTTCAACGCGAAGTATAACCTACTACGCCATATTAAATGCATACACTTGCTGAAAAATGTTAAATCTTTCGTATGCTCATATCGCGataaagttttttataaatcaaCTCATCCGGAGATTCACATTTGTACACATACTGGCCAGAAACCGTTCAAGTGTGATCATTGCGATAAATGTTTTAGCACGAAGAATAGTATGTTACATCATATTAAATGCATACACTTACCGCAATATTTTAAACCGTTCATATGCTCGTATTGCGATAAACGTTTTTACTATTCAAGTCATCTGGAAATTCACGTTCGAACGCATACCGGCGAAAAACCGTTCAAATGCCTGCAATAA
- Protein Sequence
- MNKVHCDEYVKCYDCAHCGKRFLQRRYIISHIRVHTREKPFKCHHCDRGFNAKYNLLRHIKCIHYPQNVKSFVCSYCDKGFYKSTHLEVHLSKHTGQKPFKCRHCDRGFNAKYNLLRHIKCIHHPQNVKSFVCSYCDKDVYSRGDLKIHVRTHTGEKSFICSYCDKRFYYSSKLEIHVRTHTGEKPFKCSHCNKCFSSKANLLCHIKCIHYPQNVKSFVCSYCDKGFYQLSHLKIHLCTHTGEKPFKCLHCDRGFNAKYNLLRHIKCIHHPQNVKSFVCSYCDKDFYSRGDLKIHVRTHTGEKLFICSYCDKRFYYSSKLEIHVRTHTGEKPFKCSHCNKCFSSKASLLRHIKCIHYPQNFKSFVCSYCDERFYQSSHLKIHLCTHTGEKPFKCRHCDRGFNAKYNLLRHIKCIHLLKNVKSFVCSYRDKVFYKSTHPEIHICTHTGQKPFKCDHCDKCFSTKNSMLHHIKCIHLPQYFKPFICSYCDKRFYYSSHLEIHVRTHTGEKPFKCLQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -