Basic Information

Insect: Coronaproctus castanopsis
Gene Symbol: -
Assembly: GCA_032883995.1
Location: CM065053.1:130641400-130663103[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 4.8e-05 0.013 17.4 1.6 1 23 440 462 440 462 0.98

2 18 0.00012 0.034 16.1 1.9 1 20 468 487 468 490 0.93

3 18 0.00013 0.035 16.1 1.4 1 23 496 518 496 518 0.99

4 18 0.0033 0.9 11.6 9.6 1 21 524 544 524 546 0.95

5 18 0.0034 0.93 11.6 7.0 1 23 552 574 552 574 0.99

6 18 3.3e-05 0.009 17.9 4.5 1 23 580 602 580 602 0.97

7 18 3.9e-06 0.0011 20.8 5.1 1 23 608 630 608 630 0.98

8 18 5.9e-08 1.6e-05 26.6 2.8 1 23 636 658 636 658 0.98

9 18 0.00024 0.067 15.2 6.3 1 23 664 686 664 686 0.97

10 18 3.4e-06 0.00093 21.0 6.8 1 23 692 714 692 714 0.98

11 18 4.3e-06 0.0012 20.7 4.6 1 23 720 742 720 742 0.97

12 18 2e-06 0.00055 21.7 6.9 1 23 748 770 748 770 0.98

13 18 0.00014 0.038 15.9 8.0 1 23 776 798 776 798 0.98

14 18 1.8e-05 0.0049 18.7 7.8 1 23 804 826 804 826 0.97

15 18 5e-06 0.0014 20.5 4.7 1 23 832 854 832 854 0.97

16 18 3e-05 0.0082 18.0 0.5 1 23 860 882 860 882 0.98

17 18 0.0026 0.72 11.9 5.0 1 23 892 914 892 914 0.99

18 18 3.6e-06 0.00098 21.0 3.9 1 23 920 943 920 943 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	4.8e-05	0.013	17.4	1.6	1	23	440	462	440	462	0.98
2	18	0.00012	0.034	16.1	1.9	1	20	468	487	468	490	0.93
3	18	0.00013	0.035	16.1	1.4	1	23	496	518	496	518	0.99
4	18	0.0033	0.9	11.6	9.6	1	21	524	544	524	546	0.95
5	18	0.0034	0.93	11.6	7.0	1	23	552	574	552	574	0.99
6	18	3.3e-05	0.009	17.9	4.5	1	23	580	602	580	602	0.97
7	18	3.9e-06	0.0011	20.8	5.1	1	23	608	630	608	630	0.98
8	18	5.9e-08	1.6e-05	26.6	2.8	1	23	636	658	636	658	0.98
9	18	0.00024	0.067	15.2	6.3	1	23	664	686	664	686	0.97
10	18	3.4e-06	0.00093	21.0	6.8	1	23	692	714	692	714	0.98
11	18	4.3e-06	0.0012	20.7	4.6	1	23	720	742	720	742	0.97
12	18	2e-06	0.00055	21.7	6.9	1	23	748	770	748	770	0.98
13	18	0.00014	0.038	15.9	8.0	1	23	776	798	776	798	0.98
14	18	1.8e-05	0.0049	18.7	7.8	1	23	804	826	804	826	0.97
15	18	5e-06	0.0014	20.5	4.7	1	23	832	854	832	854	0.97
16	18	3e-05	0.0082	18.0	0.5	1	23	860	882	860	882	0.98
17	18	0.0026	0.72	11.9	5.0	1	23	892	914	892	914	0.99
18	18	3.6e-06	0.00098	21.0	3.9	1	23	920	943	920	943	0.97

Sequence Information

Coding Sequence: ATGAATAATGAATCCCACAATGCAGTGCCATCCTCAAGTGCTAACTCCAATCAGGACGGAGCTATGGGGATGCAGCATGAAAGACAGGCTGTTGCTGATTCGTTACGATTACCCGCTTCTTCTGCTGCAACAACGATGGCTTTATCGAACGTGGCTAAGTATTGGGTTCTTACTAATATTTTTCCGGGTTCTATACCGCagGTTTCTGCTGTTTATTCCGTGCCTACATCTCCAATTGTTAGAGTTGATGGTAGCAAAACGTCTGAAACATGTATTAACATTCCTTCTTCAAATGAAACGATAACGTTAGTAAGCGACGCTCACTTGACTAATGCACATCATGAGTCACAAATATCGGTAGGTGGTTCTTCGACTAGCTGCGTCGCTACGATAGCAGATGCGCTAAACTCGCTCGCTGTACCATCGAATAATAGACAGGCTAGTAATATATTATTGACCGCTAGTACTGTTGCCGCTGCTACTACTGCTGCTACTAGCGACAGTACTGCTGAGCATGTGCAACATCCTTCCTCTAATAAAACTAAACTGGATAAGGCAACTTGTACGGATAATCTAGAATTTGGTCAAATACACTGCCAAcAACAAGTAGTTCAATGCGAAATACCTACAGCCGGTGGAAATGGTCGTCAGCAGCAACAGACGCAACCGCAGCAAATGTTAACTCCGCAACAACATCAACAGTTACAGGAacagatgGCTCAACACGAAGCCTTGTCGCAGCATCAACAACATCAAAACGGAAACAGCATTAAGTCCGAGACGAAGGAGATTTCTTTGCAATTAGAATGCGGTAGTATCAAAGAAGAGAAGCAACATATTAGCGTAGAACACGATATTAAACAGGAAACTCGTTTGCCTGTAATTTCTATGTCGGCCGCAGGCATAAGCATGCAAGATATAAAACCGAATCAAATGATGGATATCCGTACGATCGACGGAtctgttttaaaatttagtacGCAAGAAACGAACGATCATTCAGTCATACCTAATATGTACAAGGTCAATGTAGAAGATCTTAATCAACTATTAGCCTATCATGAAGTATTCGGCAAATTACAAACACCAAATCCGATCGAATTGGCGACCGCTGGCGATCAACAAAATCATAATTCGGCCGTTACAATTTTGCATAATTCATCATCGCCGTCGTCATCGTCCAGCATGTTGATTAAGCCATGTGACGCATTAACATCTAATTCGACTTCCAGTCAAGTGATTTCGTCGGATTTAGCCAATTTAGCCAATCCTTCGACTTCGTCTTCCCCCGTGTCTACTATCGTACCAACCGGTACTCATACATGTGATATATGTGGAAAAATATTCCCATTTAGATATCAAATGATCGTACACAGACGATATCACGCAGAAAAGAAACCATTCACGTGTCAGgtgtGCGGTAAATCGTTCGAAAGTAACGACGATCTTTTAAGCCACGGTAAATGTCATCTAGGCGGCAGTATGTAcacgtgttcgatatgttttcACGTTTTCGCTAACGACGAAAGTCTGGAACGACACGTTAAACGTCACGCGACCGAAAAACCGTATTCGTGTCACATCTGTTCGAAATGTTTCGCCCGTAAAGAACATCTAGACAATCACACGCGTTGCCATACAGGCGATACGCCGTATCGTTGTCggttttgttataaatttttcacgCGTAAAGAACACATGGTCAATCACGAACGTAAACATACGGGCGAAACGCCGCATCGTTGTGAAATCTGTAAGAAATCGTTCACGCGTAAAGAACACTACGTAAACCACGTCATGTGGCATACCGGCGAGACGCCGCACACATGTCGTATTTGCGGTAAAAAGTATACGCGTAAAGAACACCTAGCCAATCATTTACGTTCGCACACGAACGATACGCCGTTTAAATGCGAGATATGCGGTAAATCGTTCACGCGTAAAGAACACTTTACCAATCACATTATGTGGCATACTGGCGAAACGCCGCATCGCTGCGATTTTTGTTTGAAAACGTTCACGCGTAAAGAACATCTATTAAATCACGTACGTCAGCATACCGGCGAGTCGCCGCATCGTTGTACCTATTGTACGAAGTCGTTCACGCGTAAAGAACATCTAGTTAATCATATACGTCAGCATACCGGTGAAACTCCGTTTCATTGTCAATACTGTCCGAAAGCTTTCACGCGTAAAGATCATCTAGTTAATCACGTACGTCAGCATACCGGCGAATCGCCGCATAAATGTACGTATTGTACGAAAGCGTTCACGCGTAAAGAACATCTAACCAATCATATACGTCAGCACACGGGCGAGACGCCGCATCGTTGTCATTTCTGTACGAAAGGTTTCATGCGTAAAGAACATCTAACCAAtcacatacgtatacatacggGCGAATCGCCGCATCGTTGCGATTTCTGTAATAAAACGTTCACGCGTAAAGAACATTTAACGAATCATCTGAAACAGCATACCGGCGAGACCGAACATAATTGTAACATATGCTCGAAACCGTTTACGAAAAAAGAACATTTAGTCAATCATATGCGCAGTCACACCGGCGAACGTCCGTTTGTCTGTACCGAATGTGGTAAATCGTTCCCGTTAAAAGGTAATCTATTGTTTCATCAACGATCGCATAATAAAGGAGCCGCGGCCGAACGTCCGTTTAAATGCGATCTATGCCCTAAAGATTTCACTTGTAAAGGTCATCTAGTATCGCATCGTCGTAGTCATTCGAATGAACGACCGCATTCTTGTCCGCACTGTAATAAAAGTTTCGTCGAACGggctaatttattaaaacactTACGTAAAAATCATAATCTAATCGCCGCGGCCGCTATCATGCCAAATATGATCTTATCATCCAATAATATTAACAGTCTGacaaacaacaacaacaacaataataataataatattaataatcataacgtTAATGCCAAtccgaataatattaataataatactaataataataacgctacTGCTACTGTTACTATTAGTACTAATACCattactagtaataataataataataataataataatggcggTAACAACAATCAGACGCCTTCTACAAGCGGTATATCATCGCAACAACAACAAGTTTTAACAGCGGCTACAGCTATTTCGCAAATGTCTCAAGGAATAGCAGCCGGCGGTAACGGTAATGCTAATAATAACGCGGCTAATTTACACTCGACCAATCCTTTAGCGGTTATCGTGCCTGTACCTAATGCCGTGCTCGCAACCTACTGA
Protein Sequence: MNNESHNAVPSSSANSNQDGAMGMQHERQAVADSLRLPASSAATTMALSNVAKYWVLTNIFPGSIPQVSAVYSVPTSPIVRVDGSKTSETCINIPSSNETITLVSDAHLTNAHHESQISVGGSSTSCVATIADALNSLAVPSNNRQASNILLTASTVAAATTAATSDSTAEHVQHPSSNKTKLDKATCTDNLEFGQIHCQQQVVQCEIPTAGGNGRQQQQTQPQQMLTPQQHQQLQEQMAQHEALSQHQQHQNGNSIKSETKEISLQLECGSIKEEKQHISVEHDIKQETRLPVISMSAAGISMQDIKPNQMMDIRTIDGSVLKFSTQETNDHSVIPNMYKVNVEDLNQLLAYHEVFGKLQTPNPIELATAGDQQNHNSAVTILHNSSSPSSSSSMLIKPCDALTSNSTSSQVISSDLANLANPSTSSSPVSTIVPTGTHTCDICGKIFPFRYQMIVHRRYHAEKKPFTCQVCGKSFESNDDLLSHGKCHLGGSMYTCSICFHVFANDESLERHVKRHATEKPYSCHICSKCFARKEHLDNHTRCHTGDTPYRCRFCYKFFTRKEHMVNHERKHTGETPHRCEICKKSFTRKEHYVNHVMWHTGETPHTCRICGKKYTRKEHLANHLRSHTNDTPFKCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCLKTFTRKEHLLNHVRQHTGESPHRCTYCTKSFTRKEHLVNHIRQHTGETPFHCQYCPKAFTRKDHLVNHVRQHTGESPHKCTYCTKAFTRKEHLTNHIRQHTGETPHRCHFCTKGFMRKEHLTNHIRIHTGESPHRCDFCNKTFTRKEHLTNHLKQHTGETEHNCNICSKPFTKKEHLVNHMRSHTGERPFVCTECGKSFPLKGNLLFHQRSHNKGAAAERPFKCDLCPKDFTCKGHLVSHRRSHSNERPHSCPHCNKSFVERANLLKHLRKNHNLIAAAAIMPNMILSSNNINSLTNNNNNNNNNNINNHNVNANPNNINNNTNNNNATATVTISTNTITSNNNNNNNNNGGNNNQTPSTSGISSQQQQVLTAATAISQMSQGIAAGGNGNANNNAANLHSTNPLAVIVPVPNAVLATY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -