Basic Information

Insect: Coronaproctus castanopsis
Gene Symbol: -
Assembly: GCA_032883995.1
Location: CM065052.1:238085780-238094680[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.00015 0.042 15.8 7.5 1 23 137 160 137 160 0.97

2 22 8.4e-07 0.00023 22.9 1.7 1 23 166 188 166 188 0.98

3 22 1.1e-06 0.0003 22.6 4.8 1 23 194 216 194 216 0.99

4 22 0.017 4.7 9.4 8.0 1 21 222 242 222 244 0.94

5 22 0.014 3.8 9.6 0.5 2 23 251 272 250 272 0.96

6 22 0.088 24 7.1 1.1 2 23 279 300 278 300 0.94

7 22 0.0014 0.39 12.8 0.6 1 23 306 329 306 329 0.95

8 22 2e-05 0.0056 18.6 3.2 1 23 335 357 335 357 0.98

9 22 4.8e-05 0.013 17.4 1.6 1 23 363 385 363 385 0.98

10 22 4e-08 1.1e-05 27.1 2.1 1 23 391 413 391 413 0.98

11 22 1.2e-06 0.00033 22.4 2.3 1 23 419 441 419 441 0.99

12 22 0.013 3.5 9.8 4.9 1 23 447 470 447 470 0.96

13 22 4.8e-05 0.013 17.4 0.1 1 23 477 499 477 499 0.98

14 22 0.00019 0.053 15.5 2.1 1 23 505 528 505 529 0.96

15 22 0.00098 0.27 13.3 0.8 3 23 545 565 543 565 0.97

16 22 1.3e-06 0.00037 22.3 0.7 1 23 571 593 571 593 0.98

17 22 1.9e-05 0.0053 18.6 1.4 1 23 599 621 599 621 0.98

18 22 2e-05 0.0055 18.6 3.2 1 23 627 649 627 649 0.98

19 22 5.7e-07 0.00016 23.4 0.7 1 23 655 677 655 677 0.99

20 22 2.4e-07 6.5e-05 24.7 2.5 1 23 683 705 683 705 0.98

21 22 0.00023 0.064 15.2 4.1 1 23 711 733 711 733 0.99

22 22 0.0061 1.7 10.8 2.0 2 23 739 761 738 761 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.00015	0.042	15.8	7.5	1	23	137	160	137	160	0.97
2	22	8.4e-07	0.00023	22.9	1.7	1	23	166	188	166	188	0.98
3	22	1.1e-06	0.0003	22.6	4.8	1	23	194	216	194	216	0.99
4	22	0.017	4.7	9.4	8.0	1	21	222	242	222	244	0.94
5	22	0.014	3.8	9.6	0.5	2	23	251	272	250	272	0.96
6	22	0.088	24	7.1	1.1	2	23	279	300	278	300	0.94
7	22	0.0014	0.39	12.8	0.6	1	23	306	329	306	329	0.95
8	22	2e-05	0.0056	18.6	3.2	1	23	335	357	335	357	0.98
9	22	4.8e-05	0.013	17.4	1.6	1	23	363	385	363	385	0.98
10	22	4e-08	1.1e-05	27.1	2.1	1	23	391	413	391	413	0.98
11	22	1.2e-06	0.00033	22.4	2.3	1	23	419	441	419	441	0.99
12	22	0.013	3.5	9.8	4.9	1	23	447	470	447	470	0.96
13	22	4.8e-05	0.013	17.4	0.1	1	23	477	499	477	499	0.98
14	22	0.00019	0.053	15.5	2.1	1	23	505	528	505	529	0.96
15	22	0.00098	0.27	13.3	0.8	3	23	545	565	543	565	0.97
16	22	1.3e-06	0.00037	22.3	0.7	1	23	571	593	571	593	0.98
17	22	1.9e-05	0.0053	18.6	1.4	1	23	599	621	599	621	0.98
18	22	2e-05	0.0055	18.6	3.2	1	23	627	649	627	649	0.98
19	22	5.7e-07	0.00016	23.4	0.7	1	23	655	677	655	677	0.99
20	22	2.4e-07	6.5e-05	24.7	2.5	1	23	683	705	683	705	0.98
21	22	0.00023	0.064	15.2	4.1	1	23	711	733	711	733	0.99
22	22	0.0061	1.7	10.8	2.0	2	23	739	761	738	761	0.95

Sequence Information

Coding Sequence: ATGGATGCAACTGACCAAAACCAGTTTGTGTGTATTGAAGAAGGAGCTTGTGAAACTGTTGTTTCTGAGGAATGTGTCCAACCTGAAGTCGCTTCCAAAGATGAATGGTATTTGTACTTATTACAAGCAGATCGCgcgattgaaaaattaaaagaaggaGAAGTGGAGATTAAACAAGATCCTGATGAGGTTTTGATTGAAATGGACAATGGTCTTCATTTTGATGTGGATAATCAGGAAATTGttgaaaatagagaaatatatAGCGATAATAGCACtgaaaataaaagtttcaaCGAGTACGCTTCGGAGGTTGTAATAGGTATCGGCGAAGAGGTTGTAGTCGAAGATAACGACAGGTCAAATATGACGTTTACGCATTACGACGAATCTATATCGAACGGTCTGTTTCATTGTGTTCATTGTAAGAAGAATTTCAatcgaaaaagtaaattatttcaaCATATGTCGACCGTTCATAAAGACATGAAACGTTTTCCGTGTATGCATTGTTCGAAAAGTTTTAATCAACGCGTTAATTTAGAAAATCATATACGCGTACATACCGGCGAAAAACCGTTCAAATGTGAATATTGTCTGAAATGCTTCAGTCAGCAAGGTAATTTAAAAACGCATAttcaaaaacatttatatatcgaatatttCATCTGTCAGTATTGTCAGAAAAAATTCAATTCCAAGTTCGATTTGTGCGAACATTTAAAATGTCATTCGGATAACGTTAAATTGGAATGTCCTTTCTGTAAAGTGACGTTCGGTAGCGATACGGCGTTAAACGATCACTTGCAACATCATACCGgcgataatttatttctatgttTGTTGTGTAAAGATAATTTCGACAGTCAATTCACTTTGAACGAACATCTAAAAATGCACTCGATGCAAGATACGTACGAATGTATTTATTGCAAGATGATATTTATCACACGATCGGAATTAATGAATCATTTATCGAAATCACATAAAGTGGGCGACGAATTTCAATGTCCGCTGTGTAAACACGATTTCTACACAGCCGATCATCTGAATCAACATATGGAAATGCATAAAGGTGAGAAACCGTTTAAATGTTTGTACTGCGGCGAACGATTCTATACCGAATCTATGATGACGAAACACGTTAAATTACACGAAGGTAGTAAATCGTTCGTTTGTTCTTACTGCAACAAGAATTTCAGtcaaaaaggtaatttaaataCGCACATTCGTCGTCATACCGGTGAACGTCCGTTCAAGTGTACCGGCTGTCAGAAAATGTTCAGCGATTATTCTACTTATACGCGTCACGTGAGAGTTCACACTAAAGAAAAACCGTATAAATGCAAATTTTGTTTAAGACAATTTTCGCaattatctaatttaaaatGTCACATAGCGCGTCGTCATAATTCGGAAAACGTAAAATACGAATGCGAATACTGCGTCAAACAGTTCGACCAGGAAGACGAATTACGTGAACATTTGCTTATTCATAAAGGCGATAAACCGTACGTTTGTCAAGTGTGTTTGAAAAGTTTCAGTCAATGGGCTAATTTAAAATGTCACATTTTAAGCGGTCACCATCCGTTAAACTGCAACGGCGATCCGATGAAAGTCGGCGTGATGATATGCGAATTTTGTGACGCTTGTTACGATAATCAGGATTTATTCGAAGATCATTTAAAAACGCATACCGGTAAAAATCCGTACATATGTAACGTTTGTCAGAAAACGTACGGCACTTCGGCTAATTtgaagaaacatttaaaaatacacaaCAGCGTCCGATCGTTTCCGTGCAATATGTGTACGAAAGCTTTCCACACGCAAGCCTTATTGAAAAATCACGTGTTAACGCACGAAGGTGTAAAACCGTTCCGTTGCGCTTATTGCGATAAAAGTTTCATCAATAAATATCGTCTTCGTAGtcacacatacacgcatacCGGTGAGAAACCTTTTCAGTGCGTATATTGCGAACGACCGTTTCGTAATCAATCGGTACTGCGTCGACACATTCGCATACATACGGGTGAGACGCCTTATTCTTGTCCGTATTGCGGGAAAAGTTTTAAAACTCATTCGGAAAACAAATTGCACATTCGAATTCATACAGGCGAAAAGCCGTACAAATGCGTAGTGTGCGCAAAATGTTTCCGAACGCATTCGGCTATTAAAATGCACATGAAAATTCACAATCGACAATTACTAACTTGCGAATTATGTAAATGTACTTTTCAGTCATTAAAACCGTTACGAATTCACATGAGGGAAATGCATAGTATAAGAACCAGCAGCGAACAAATAGACGAAGTATACATTaccgaagaagaagaagaagaagaagaatgcgACGATGCTGAATATGATGAAATGTTGttggaaactgatattttagaCGGGGAAGAAGTTTACGCAGAAGAAGTCGACATCGATGTCGATGATGATAGCGAGGAATACATTATCGGGAACAACGGCGAAATTCAAGAAATAGAAGAGATAAATGAAATCTTAGACATCGAAGATGGCGAAGAAAACGAAGATGAAATTTTAGGAGCAGGCGACGAAGTAGAAGTAATACATCATTTAGAAGTGCCCAAGTTCGATATAACAGATATGCTTCATAAAGCTGACGACAGTGACGATATCGATGAAATGATCGTGTTCAATAATGCCGATGATACGGATTTAATAGATGAAGACAATAAATCTAATCTTGTTGATATTGAATATGTTGATCAGCATATAAGCGTAGAAGAACTAGAGTTTTACGACGAACCTATCAAAGTGGAACCAGTTGATGATGATTTCTtcgaaaatatggaaaatttgATGCAAGAAGAAGGTTAA
Protein Sequence: MDATDQNQFVCIEEGACETVVSEECVQPEVASKDEWYLYLLQADRAIEKLKEGEVEIKQDPDEVLIEMDNGLHFDVDNQEIVENREIYSDNSTENKSFNEYASEVVIGIGEEVVVEDNDRSNMTFTHYDESISNGLFHCVHCKKNFNRKSKLFQHMSTVHKDMKRFPCMHCSKSFNQRVNLENHIRVHTGEKPFKCEYCLKCFSQQGNLKTHIQKHLYIEYFICQYCQKKFNSKFDLCEHLKCHSDNVKLECPFCKVTFGSDTALNDHLQHHTGDNLFLCLLCKDNFDSQFTLNEHLKMHSMQDTYECIYCKMIFITRSELMNHLSKSHKVGDEFQCPLCKHDFYTADHLNQHMEMHKGEKPFKCLYCGERFYTESMMTKHVKLHEGSKSFVCSYCNKNFSQKGNLNTHIRRHTGERPFKCTGCQKMFSDYSTYTRHVRVHTKEKPYKCKFCLRQFSQLSNLKCHIARRHNSENVKYECEYCVKQFDQEDELREHLLIHKGDKPYVCQVCLKSFSQWANLKCHILSGHHPLNCNGDPMKVGVMICEFCDACYDNQDLFEDHLKTHTGKNPYICNVCQKTYGTSANLKKHLKIHNSVRSFPCNMCTKAFHTQALLKNHVLTHEGVKPFRCAYCDKSFINKYRLRSHTYTHTGEKPFQCVYCERPFRNQSVLRRHIRIHTGETPYSCPYCGKSFKTHSENKLHIRIHTGEKPYKCVVCAKCFRTHSAIKMHMKIHNRQLLTCELCKCTFQSLKPLRIHMREMHSIRTSSEQIDEVYITEEEEEEEECDDAEYDEMLLETDILDGEEVYAEEVDIDVDDDSEEYIIGNNGEIQEIEEINEILDIEDGEENEDEILGAGDEVEVIHHLEVPKFDITDMLHKADDSDDIDEMIVFNNADDTDLIDEDNKSNLVDIEYVDQHISVEELEFYDEPIKVEPVDDDFFENMENLMQEEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00372363;
90% Identity: -
80% Identity: -