Ccas010618.1
Basic Information
- Insect
- Coronaproctus castanopsis
- Gene Symbol
- bab1
- Assembly
- GCA_032883995.1
- Location
- CM065052.1:150854628-150873124[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-16 4.3e-13 50.2 0.0 1 43 45 88 45 90 0.95
Sequence Information
- Coding Sequence
- ATGTCGCGAAATACCGTCACAGCGGATAGTTACCAATATCAGTTACAGTCGATGTGGCAAAAATGTTGGAATACCAATCAAAGTTTGGTGCATAATTTAAGGTTTCGAGAAAGAGGCCCGTTGAAATCTTGGAGACCCGAAACTATGGCCGAAGCAATTTTATCCGTATTAAAAGAAGGATTATCCTTATCTCAAGCTGCGCGCAAATACGATATTCCGTATCCGACGTTCGTACTGTACGCTAATCGAGTACATAACATGCTCGGACCGTCTGCGGACGGAGGTTCCgATTTAAGACCGAAAGGAAGAGGAAGACCGCAAAGAATATTGTTAGGCTTTTGGCCGGAAGATCACATACAGCACGTGATTCGAACGGTCGTCTTCCGAGATCAGCAACACATGAAGGACGAACCGCTAAATTTAGTCGGATATCCCAGAATTTCGTATTTGCAGGAACCGTTGTCCGTGTACGGGAATGGTAATTCATGTATGAATAGTCCAGAACATCCTTCTTCTCCTAATTCGACTGCGGCAGCTGTCGTAGCTATAGCTCAAGGATTGAGACAGCAAATGTTAGCCGCTGCCGCTGTAGCTCACTCTACTAGCGAAACTAATTTCGGTTTTTTCTCGCAGTGCACGAATGGAGCTCCTCCGAATTTATTAATGGCAACACCTTTACATAGTCCACACAGTACACCACCGGTATCACCATCGCCTAACAACTTGGAAGTAGGACTTGGAATGACTAGTCTGCCATTTAAACAAAACGATAGTTTTCCTATGAGTCGCACCGAAAGTTTACTACTACAAGAAGATATCGAAGATTTAGTCATGAAAGCTCCACCGCCGCCATCGCGTAATCATATTACACCGACAAACGACCAGCATCAACAACCATTACCATTAGTGTTGGAACAAAGAGGCGAATGA
- Protein Sequence
- MSRNTVTADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAILSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGSDLRPKGRGRPQRILLGFWPEDHIQHVIRTVVFRDQQHMKDEPLNLVGYPRISYLQEPLSVYGNGNSCMNSPEHPSSPNSTAAAVVAIAQGLRQQMLAAAAVAHSTSETNFGFFSQCTNGAPPNLLMATPLHSPHSTPPVSPSPNNLEVGLGMTSLPFKQNDSFPMSRTESLLLQEDIEDLVMKAPPPPSRNHITPTNDQHQQPLPLVLEQRGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00833884;
- 90% Identity
- -
- 80% Identity
- -