Ccas035368.1
Basic Information
- Insect
- Coronaproctus castanopsis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_032883995.1
- Location
- CM065053.1:199954821-199960531[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-17 8e-14 52.6 0.0 1 45 246 291 246 291 0.95 2 2 2.1e-18 6.1e-15 56.2 0.0 1 43 789 832 789 834 0.95
Sequence Information
- Coding Sequence
- ATGACTAGAGACATTTATTCTCCGAACGGTGAGAGCGTCGCCAGCTCGGACAGCGACACCGCTAGTCGTAGTAGTCACGATAGTAATGCAGCTAGTAGCACCGATAGTGAAACGGCGCATTCGACCAGAATCATCGCAACGGCCGCAACAGCAACGGCTACGAATATTTCGAATTCGAAAGAATTACGCTTGATGTACTCGCAAATCTTCAACAAATCGTCATCGTTGTACTCCCGGAACATAGACGAAGATTCGGATAGCAGCAACGCAATAAATACGTCCGTATATCCAATCGGAACATCGTCGGCTATTACCGATAGATCTTCAGACAAGATACTCGATAACAACgacgaacataataataataataataacaataataataataataataataatgattttgatTTACAACAATCTCCTTCAAGTCCTTCCcgtacaaaattttatcaatttccaAATCCTTCTGAAGGAAGATATTTACCACCACCGACCTTATCGTCACATCTGCCATTGATGCCAACGTCGATGTTCGGGTTTAACGTTAAATCAGTCGACGAAAAAAGTCGAGGACTGGAAGACGATCAACCTTTAGATCTGAGCACTAAATCGACATCCTTAAATTTAGATTCACCAACGGACGAAGAAACTAATTCGCGAGTACAAATTTGGAACCCAAACCGTCATATAATACCGATTAAACCTCGTTTAACGGTATCCGGCAGAAGAACTTACACCGATGAAGAACTGAAAGCAGCTTTGAACGATATACAAAGCGGCAAATTAGGCACTCGACGAGCGGCAGTTATTTACGGCATACCACGATCGACACTGCGTAATAAAGTTTACAAATTAGCTATGGACAAAGAACGTTATTGTCCGGAAGACGATAATAGAAAACCGTCGATCGAAATCGAACAACATCCAACaatgatgacgacgacgacaacaacaacaaccaCGACGACAGAAGatgacgaagaagaagaagaagaagatgaagacGATCCGATGGAAAACATAGACGATAatccgtataataataatgacaccGAAGAATCGTCCGCCAGAACGACAGTGGCAATAATCGCTGACGATAATCCCGAGCAAAATTCCAGCAACGAAGTAATAATGACGGATGAGCGTTCGATGGATTCGTTACCAACTTTGTTAGGATATCGGAGGAATTTTCACCGTTTGTCGGAGGATCGACGAGATGacaataatgacgatgatatagGCGACGACGATGATCACGCTAGTAAAATACGAGAAGAATCTCCGCAACGAGAAAATTCGATGACCGCTACATCGCCGGCATCGTTCTTACATCATCCGGCAATCGTAACAGCAGCGGCCGATGTGACGGGTCATCAGTTTAATACTCCGCTCTATTCTATGTTTCCACCGGGTGCTAGCGAAATTTGGGGTAATTTAGACCCGGTTACGATAGCGCAATTAATAGCCGCATCTCGCGATAATTTAGGTATGCAGGCGACGGCGGCTGCCGCGATTTTCAGTAACAATCCGTATATAAAATCGCCAGTCGGTGTTGCTGATAACGTGGAATCTCGTACCAGTCGTACGATATCGGGTTTCGGTTTTAAATTACCTTCGCCGATTTTTCCGGCCGAACTGATGCATCGAATAATGATGGAGGAACGATTATTACTGGAAGAACAACAAAGGAAAACAGTTCTGGAACGATTATTTCAAAAAACCACCGCCGCTAATATGATCGACGTTAAAAATCAACAACACGTTCGTAACGGTCCGTTAATTGATACAGTTCCTTCGTCGCCGATTTTTAACGTTCCCGGTTATTCGACGATTTATAAAAACGGCGCCTCTTCCGGGTATCCGATTGAACAAAAGGCGTGTGCTACATCGACCGACGATGCGAAACAGTTAACCGTTACTACCACGCCCGTCTCGGAAGACTCTAAAAGCGACACAAGATCTCCATCGGCCGCCAGTAGCGGTAATAGCGATTCGTCGTCTCCGCCGATAAATTCCGTTTCTCCGTCGATGAGCTTCAATCTACGAGACGTTATAACGAAAAGTATCAGTCAACGATTTCAACATTCTTCGTCGACTAATATCGACGGTTATCAACAATCGCGTAGTACCGCCGGAATAACAACAACGACCGGTACTACCAGCTCGGACGACGGTAATAATAGTATAGAACAGTATCGTCGTTTCGTCAGTCCCGGTGGTAGCAGCGTGATTAAAAGTACCGTCGATTTCGCTCATAGCGGTCATCATCATAAAGTTCCTTTACAAATACCGAACTCCAATAGTAGTACCGGCGGTGGAAGCGGTAAAGGTACTCGACCGAAACGTGGTAAGTATCGAAACTACGATCGAGATAGTTTAGTGGAGGCTGTTCGCGCCGTTCAGAGAGGTGAAATGAGCGTACATAGAGCCGGTTCTTATTACGGCGTTCCTCATTCCACGTTAGAGTATAAGGTAAAAGAACGACATTTGATGAGACCGAGGAAACGAGAACCAAAAGCGGTACTGCAGCCGAATGACGATTTAttttcgtcgtcgtcgtcgaaaAAACGAGAAGACGGTTGCAGCGTTATTAGACTAGCGTCGTTCGATAAAGTTCTGTCCtcgcagcagcagcagcagcaatcTTCTACTTCTTCTAATAGTAGTTCGTCTTTAACTAAAACTAACGTTAAACAACACTCGTTCGCGGCGTCGATGACCTCACCCGTATCCGCCGCTAATACGACTAACGGCGTTAAATTATCGTCTTTATTCGATCCGACCGTTGCAGCCGCCGCTGTAACGACGTTTAATCCGTTTCCATTTTGGCCGCCTAATCCGTTTCAACAATTAGCTGCCGCAGCTGCAGCGGCCGCCGCGGCTGCGTCTAACGTTGCTGATTATTCCAGATCGAGCAGTTCGTCTACACCGACGAATGTCACCTCCGATAATTTGCTAACTTCGAATTTTGTCCACCGAATACAAGAAGAATCTTCTAAATTAGCCACTACcgttaataacaataacaataacaataataataactcgCAGGTTGATTCCTCTACTAGTAAAAATAATGACGATACTACCGTAAAAAAAACTAGCCCGTTATTAACGGTTACAACCGATAGAGGTAACGGAAACGTTACAGACCTGGCCGAAAGTTTATACGACGGTTCGAACGTTAATTGCGGCTTTCTAGACGGTATCATCAGATCTAGTCTCGAAACCGGATTAACCGGAGTCGTCGACAAAAATAACGATCCGAATGACGAATCGACAACcgaacgaattattattaatcgcagAAATATTCTCGAacaattctataaaaataagtacGCGGATTCGTTGAGTAAATTCAACAACGCCGCTACTATTAATAATCCGATCGTAGTGAATCCGTCCTCAATTCGGCCATTATCAGCCGAAAAACTCAATCCGACGGAGACGATATCCGCGACCGTCATCAGACCGAAGTCGATCGATATCggtactaaatttaaaatttcggaCGAGACATCGCGGCGGCATTCTTTATCTCCCGAAGATAAATCTCTTTGTCGAACTAACCTCGATTTTAAACGTCAAAATGAAGACtgcgaaaataaaatctttCACCATCGTCGTTATCAAATCGGTAGCGGCACCAGTAGCTCCGAACAATAA
- Protein Sequence
- MTRDIYSPNGESVASSDSDTASRSSHDSNAASSTDSETAHSTRIIATAATATATNISNSKELRLMYSQIFNKSSSLYSRNIDEDSDSSNAINTSVYPIGTSSAITDRSSDKILDNNDEHNNNNNNNNNNNNNNDFDLQQSPSSPSRTKFYQFPNPSEGRYLPPPTLSSHLPLMPTSMFGFNVKSVDEKSRGLEDDQPLDLSTKSTSLNLDSPTDEETNSRVQIWNPNRHIIPIKPRLTVSGRRTYTDEELKAALNDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMDKERYCPEDDNRKPSIEIEQHPTMMTTTTTTTTTTTEDDEEEEEEDEDDPMENIDDNPYNNNDTEESSARTTVAIIADDNPEQNSSNEVIMTDERSMDSLPTLLGYRRNFHRLSEDRRDDNNDDDIGDDDDHASKIREESPQRENSMTATSPASFLHHPAIVTAAADVTGHQFNTPLYSMFPPGASEIWGNLDPVTIAQLIAASRDNLGMQATAAAAIFSNNPYIKSPVGVADNVESRTSRTISGFGFKLPSPIFPAELMHRIMMEERLLLEEQQRKTVLERLFQKTTAANMIDVKNQQHVRNGPLIDTVPSSPIFNVPGYSTIYKNGASSGYPIEQKACATSTDDAKQLTVTTTPVSEDSKSDTRSPSAASSGNSDSSSPPINSVSPSMSFNLRDVITKSISQRFQHSSSTNIDGYQQSRSTAGITTTTGTTSSDDGNNSIEQYRRFVSPGGSSVIKSTVDFAHSGHHHKVPLQIPNSNSSTGGGSGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKAVLQPNDDLFSSSSSKKREDGCSVIRLASFDKVLSSQQQQQQSSTSSNSSSSLTKTNVKQHSFAASMTSPVSAANTTNGVKLSSLFDPTVAAAAVTTFNPFPFWPPNPFQQLAAAAAAAAAAASNVADYSRSSSSSTPTNVTSDNLLTSNFVHRIQEESSKLATTVNNNNNNNNNNSQVDSSTSKNNDDTTVKKTSPLLTVTTDRGNGNVTDLAESLYDGSNVNCGFLDGIIRSSLETGLTGVVDKNNDPNDESTTERIIINRRNILEQFYKNKYADSLSKFNNAATINNPIVVNPSSIRPLSAEKLNPTETISATVIRPKSIDIGTKFKISDETSRRHSLSPEDKSLCRTNLDFKRQNEDCENKIFHHRRYQIGSGTSSSEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -