Ccas040789.1
Basic Information
- Insect
- Coronaproctus castanopsis
- Gene Symbol
- jarid2b
- Assembly
- GCA_032883995.1
- Location
- CM065054.1:7701172-7725380[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.3e-17 6.3e-13 50.5 0.0 21 89 36 102 21 102 0.85
Sequence Information
- Coding Sequence
- ATGGACCAGAATAAAACAACCATGACTGGTATGGGTGAAGCTCGTCCTAAAAGATGGAGACCTTCAATGAGGTATTTTGACAGAGTTAAAAAAATTCTAAGAGCTGAATCAGTGCGGGAAaTCGGCGGTATAGAAGTAGATATTCCGAGACTTTATCAAACGGTTCAACAGTGCGGCGGTTTAAAAGAGGTTATTGTAAAGGAAAAATGGCAACGCGTAGCCGACCTGATGAAAATACCAAAATTAGCTCAAGAACGAGCTGCTAAGTTGGACGATATGTATTGCAAATATATTCTACCGTATGACACGTTATCCAAAGATGAACGAGAAAAATTATTCGAACAAGCGGAAAAAGATTGGCGTCAGTATACGAAATCTGGactaattaataacaaagcttATGAAGATATAGGTGAATGCGTCGCcaagggACGTACAATGCCGTTAAGTTCATTTTATAGAATTGCGCGGAATACTATGTTAATGTGGTTTGGCGATAAAACAAATGTATCTCCCGATGTGATTGAAGAGGAATTTTGGAAGCACGTGTCTGATAGGAAACATCATTTGTGCGTAAATTTTGGATCAATCGATTCGGGTTCATACGGATACGGTTTTCCGATATCTAAAAATAGTACTTTTTCCAAACATCCGTGGAATTTGAAAGTGTTTACTAATAATACATCGTCCATAATTCGTTCATTGGGACCTATTATAGgtgtaacGGTGCCAACGTTGCATCTGGGCATGCTATTCTCTACCTGTTGTTGGTACAGAGATCCTCACGGTTTGCCTTGGATCGAGTATCTACATACCGGAGCTAGCAAAATATGgtATGGAATAGCGGATGAAAATAGCGAAGTATTCAAACAGGCCGTTTTAAATGTCGGTCCTCGATATTGcagaaataaaagtatttggTTATCGTCGGATACGATAATGATTCCACCGTCTTTACTAGTCGAACGTAATGTGCCGATTTCGCGTGTTGTGCAGCATCCGGGTGAATTTATCGTAGTTTTTCCGAAGTCGTTTACTTCCAGCATTTCGACCGGTTATTTAGTGTCCGAAAGCGTCTATTTCGCACAATCTTCGTGGCTAATGACTGCCGAGCAAGTTTTCAAAgatATGCGTGACAGCTGTGAACCTTCTGTATTTTCATTGGAAGAACTTTTAACGAGTATCGCTAATGATACACGCGccaatataaacatattaaaacaGGTGTTGCCTATGCTGGGTGATATGAGGGATAATGAAGTAGCGTTGCGTAGTCAATTGGAAGAGCTTGGACTTCGATCTTCCGAAAGATTAGTAATCAATAAAAGGAAGAAATCTTCAAGAGGATATACGGACGATGATGACAATTACGAATGCGGAATTTGCAGAGCGAACCTTTTCCTTTCTTTCgTGATTAATTCGCACGAGCAAAGCAATTACTGTCTGCAACATGCGGTTCAGTtcttatataaaaaacagaatcaAGTTAAATATTGCAAACTGTTATATTCTTATACAGAGAAACATCGTAACAAGATCGATCACAATAGGTAA
- Protein Sequence
- MDQNKTTMTGMGEARPKRWRPSMRYFDRVKKILRAESVREIGGIEVDIPRLYQTVQQCGGLKEVIVKEKWQRVADLMKIPKLAQERAAKLDDMYCKYILPYDTLSKDEREKLFEQAEKDWRQYTKSGLINNKAYEDIGECVAKGRTMPLSSFYRIARNTMLMWFGDKTNVSPDVIEEEFWKHVSDRKHHLCVNFGSIDSGSYGYGFPISKNSTFSKHPWNLKVFTNNTSSIIRSLGPIIGVTVPTLHLGMLFSTCCWYRDPHGLPWIEYLHTGASKIWYGIADENSEVFKQAVLNVGPRYCRNKSIWLSSDTIMIPPSLLVERNVPISRVVQHPGEFIVVFPKSFTSSISTGYLVSESVYFAQSSWLMTAEQVFKDMRDSCEPSVFSLEELLTSIANDTRANINILKQVLPMLGDMRDNEVALRSQLEELGLRSSERLVINKRKKSSRGYTDDDDNYECGICRANLFLSFVINSHEQSNYCLQHAVQFLYKKQNQVKYCKLLYSYTEKHRNKIDHNR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -