Ccas025735.1
Basic Information
- Insect
- Coronaproctus castanopsis
- Gene Symbol
- jarid2b
- Assembly
- GCA_032883995.1
- Location
- CM065053.1:62579193-62636645[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7 5.3e+04 -4.0 0.0 51 65 298 312 283 324 0.57 2 2 1.5e-19 1.2e-15 59.2 0.0 6 89 1442 1523 1437 1523 0.93
Sequence Information
- Coding Sequence
- ATGCCTAAGAAATCATCGCGAGATGAATTTGAACCGAAGTCATCATCTCATAAAAAGGCTAAAATATACGCTCAACGAAAATTCGCAGAAGGATTTTCTTCAAATCTTGGCAATAAATACGTCAACTCTggtaatagaaataataacagCAACACTGGTGTAAATACTAAAAAAGCGTCTAAATTACCTGATGCTTTTACTAAGTGTCCTATTACTATTCCATCTCTCGCTGATGCACCCGGGCCATTTGATGAAGTTCCAAAACCAACTGTTGAGGACTTCATTGATTTTTTGTGTTTTAGAGGAACTGAACGTCTTCCGGAAAGACTAAATTACTTGAATTACCCGCCAGAGtatgaTGAGGCATTGTCAATGCCTCCTCCTCCTACACCGCCACCATTAACTTCGAAGCGACGAGCATCGAGATTTGAACAACAGAGATCGCAGCAGTCAATAGGTTCGGCATCGCCATCATTAACGTCACTAGAAAAATCTTCACCGTCGTTACAGAAATCACGATTTAAGTCAGAGAATCACTTTccaaaacaacaaaaaaacgaatCAGAATTGGCACAGCAACTATCAGTAACACTGAAAGAACCATCGTTTTTGAAACAACAGCAGGAGTCTTATTCAAATAAAGAATCACCGATAGTGGAATCTTCTTCTTTATTAGGATTGGAAACTAACGCATGCAAAAACGCGAAAACATTACCAGGGGCGGAATTCGGCTCAGATCATAGATTGTTAATGATGGAAATCAGGTTAAAACTAAAAGTTCGAAATAAAAGATCGCCAttaacaaacattaaaattttaaatccaaAAGGGTTTGAAGCAACCATGATAACAAGATTTGGTAACTACACAGAGGAGAACGTGAACTTATCTTCGGAACAAAGCTGGAACCAGTTGAAAGAACACATTAAAAACGCAAATAAAGATTCGCAACCGCCccataaaataaagaaatggaaACATTGGTTTTCAAATGAAACAGTTGCGGTTATAGAAGAACGGAGAAATCTAAaTAAATCGACAGCTTTTGTCGAATCATCTACTAAATCAGCGGAAAAAAATACTGCTGTTGGTAAAACCAAATGGAGACGAAAGGGCGTTGCTGACGAATATTTGGTacctaaaaatattttcctaGAAGAagtCGTTAGCGAACGGAATAATAGATATCAATATTATCGGTCATCGTATTATAAACGTGAAACTAACGGCTATACCTGTAAACACGTCAATACATGCCTACTACTGTGGCATCCGAAGATGGAAGTATATGTACAGTTGGAACTTGAAACAGTACGTGCTGatgataatgttataattatgGGCGACTGGAACGCAGTGGTAGGTGAAGGACAAGATAAACTTGCAGTTCGTAATTTTGTATTTGGAAAAAGAGATACACGTACAAAGATTGTTGTATTTTTAACTATCATTCTAGTACTTCATGCGTCGAAAATCCTActgaaaataatgaagaaacgGTTAGAAGCCCTGATTGCTAAATATGCGAATGAAACGCTATATGGATTTAGAAAAGGCCGATCTACACGTGATGCAATAGCGGCATTGCGAGTGCTAGGAGATCGTATGATAAATCAAGGTAGGTGTCACGATGTAGCTTTTATCGATTatgaaaaagcctttgataatgtaCAGTGGAAAGACTTACACTATTACAACAAATCGGATGTTTATGAACAACGTGTACAATCAACATTACACGAAGGCAGAACTCTTCGTAGCCGTAATAGGAGTTCTTTAACGTTTGAACAGTGTTCGATTATTCCTGAAAATCGATTGTCCACAGgCGATTGTTTGAACGATTTACATAATCGTGGAAGCAGTGTCTCATCGATTATAAATGAATTAGAATCTCCCGATAGTCATGTTAATAAGCAGTCATCTAAATCAAATGACAATGTCAATAAAGTATTCATGTTggattcgataaaaaataaattaacaaatgaaccTGCGAATCAGATTAATAGTCAAGAAACTAATAATTACAGTACCtattcaaataaaaagaaatcaattgtaaatataaatggcgTAACTGTAGCAGATTCAAGTCGAAGAgatattcttgaaaaatttttaattggtGTTGATAAAACCGAACCGGAAGAAGAGCAAGGAAATCAAGTTACGAGAGAAATGAATAATGCAGTTTCTCTAAGTAAAGAATTGAATCTAGATGATCTGTTGAATAGTAAGAATGACGTGACTAAATCTACTTTATGCGTAGAAGAAAATAGTACTCGGGAATTATTGCCTCAACAAAATGAAATGAAGATTTCGATTTATGATATTACTGTACACACTTTAGATACCGCGAAAACAGCACCATTCGACTCAAAAGATCGACCTGTTCTGAAAGAAGATCCTATTGTAAAGTACAGTGATACGGAAATATTTGACGTTAGTGAATTCGAAAAATCTGAATGTAAGAGCTTGACTAAACTTAAAGAACTGCCATTTCCTAAAATTAAATCGAACATCGATACAAAGTTATCTgctaaaaagaaattaaatgaaaataaaagtgataCAGATGCAAtggataaattatttcattctaaaACAGATACAAGCGTCGAAAAGAACGTACAAAATCCTGCGGCGAGCAGATTGTCTATAAATGATATGCAAACAACAACGAAGTCGATGCACTCGTCCAAGGGAAAACTTTCGAAAAAGTTAATTACCAACTTCAGAAAATCCAAAAAATTTAACTTCCGAAATGTTCTGAAAAGATCTTGCGAAATACGCAAAAATCATGACAGTAACGATAGTAAGCgtggtttatttataaataagttgAAAACTGATGAGGATGTTGTTCAATTGATGAAAATTTCTGACATTATAAATTCGAACGATAAAGAGTTGCAGAACGAGACAACAACAACAACTTGTGATAATTCGATGCATTCTTCGAACGAAAAACTAGAAAAACGTAGAgttataagaaaaagaaaattaggtTCAACTAAACCGATAAGTCCGTCTCATAAATCTCTTGAAACGTGTATAAATGAAACGGAAATTGCGAATTCTGATATTACTGTCAATCAGGGTGAATCATTAAAATATCTTGACGTCTTAAATGATGTTAAAGTTAAATCACCAACAAATTCATTCGAAATCGAATTGGACGTTAGCGATGTACATTTACAACCAGAAAAttcgtcaaaaataaaatattcagaaaaattttcaccgattactaagaaaaaaaagttagaatCATTGAAAAATGTGCAACAATTTTCGAACACAATACACGAATCATGTGTCAGTAATAATTGTATTAAACAGAACCTGTCAAATGTTTCAGCTGTTAAAAAGTTTCAAAAATCTGCAAATACTCGCACTTCAACCATTTTTAAAGACTATTCGTTAGATAAGGATAATAGGAGCGATGATATAGGTGAGGACAGATCTTGTAGACAGAGAAAAATTTCTGACTGTTCACCAAACAATAAATGTTCCACAAAATTAGAATCATTTGCTGAGACTTCATCTTTAGcattaattcaaaataaagataattgCGTGTCATACAGCAGCGGAACTGAAAAAACTTCGTCACAAATTGAACGGtctaaaatgttaataaatacgACGGAAGATTCGGATGTTGATTCAGGAGAAACTAATGCGGGTAATGTCGCCAATCAACTAGACGAGTCATCTGATAGAATAACAAGAAAATCCACTCGAATTCAAAGGATGTGTTTTTCGAACGTGAAAACTACTACAATGGAAAGTAAAACTAATATCTCAGATAAATCTATTACAACAACGTTAACAATGACCAAGAAATCAGATCGTCAAAGTCCAGGCACAACATCGACTTCGACATTTCCTGATGATACGAAATCGTCTCGAGATGGAAAAATGGTTAATTTGGTTGCCGAAATTTCTTCGTCATTACCAACAGAAACGGTTACAACTAATAACACCGTCACCGCTATTACTACTAGGAGAAAAAATCGTATGTATAATGGAGTGACATCCAAGAAAACAGTAACGGTAGGTAGTGACGATAATGGTAACCGTGCACGTATTGATGGAATAATGGAAGCTCCGACGTTTTATCCGAATGAAAAAGAATTCGTAGATCCGATGCGCTATATAGAGTCTATACAACCGATTGCGGAAAAATTTGGTATTTGTCGCATTGTACCGCCGTCGAATTTCAAGCCTGAATGCAAAGTTATCGACGAAATGAGATTCATGGCATACAATCAGTATGTCCACAAAATGCTAAATAGATGGGGTCCAAATGTAAAAGAGATGTCGGccattaaaaaatacttattaacGCAAAATATTGCTTTTACTCGTCCGCCATGGatcGGTGGCATTGAAGTAGATGTTCCAAGGCTTTATCAAACTGTTCAACAGTGTGGCGGTTTAAAAGAGGTGATTGTGAAGGAAAAATGGCAACGTGTAGCAGATTTGATGAAAATACCGAAATCAGCTCAAGAACGATTAACAAAATTAGATGACgtgtattgtaaatatattttgccGTATGACACTTTATCCGAAGacgAACGAAGAAAGTTACTCGAACAAGCAGAAAAAGATTGGCGCCAATTCACCAAATCTCGTCAAATCAATAACAAAGCGTATGAAGAAATTGGAGAGTGTGTTACTAAGgGACGCACTATGCCTTTAAGTTCATTTTATCGAATTGCACGAAATACTATGATGATGTGGTTCGGAAATGAAACTGAAATTTGTCCCGATGTGGTTGAAGAAGAATTTTGGAAACACGTTTCAGAAAGGAAACATCATTTGTGCGTTAATTCTGGTTCGATCGATTCAGGTCCGTATGGCTACGGCTTTCCAATATCCAAAAATAGTACTTGCTCTAAACATCCGTGGAATTTAAAAGTGTTAACTAATAATACATCGTCAGTAATTCGTTCATTGGGGCGAATTATAGGCGTAACAGTACCTACATTACACGTGAGCATGTTATTCTCTGCTTGCTGTTGGTACAGAGATCCTCATGGTTTACCTTGGATTGAGTATCTTCATACTGGAGCTAGTAAAATATGGTAA
- Protein Sequence
- MPKKSSRDEFEPKSSSHKKAKIYAQRKFAEGFSSNLGNKYVNSGNRNNNSNTGVNTKKASKLPDAFTKCPITIPSLADAPGPFDEVPKPTVEDFIDFLCFRGTERLPERLNYLNYPPEYDEALSMPPPPTPPPLTSKRRASRFEQQRSQQSIGSASPSLTSLEKSSPSLQKSRFKSENHFPKQQKNESELAQQLSVTLKEPSFLKQQQESYSNKESPIVESSSLLGLETNACKNAKTLPGAEFGSDHRLLMMEIRLKLKVRNKRSPLTNIKILNPKGFEATMITRFGNYTEENVNLSSEQSWNQLKEHIKNANKDSQPPHKIKKWKHWFSNETVAVIEERRNLNKSTAFVESSTKSAEKNTAVGKTKWRRKGVADEYLVPKNIFLEEVVSERNNRYQYYRSSYYKRETNGYTCKHVNTCLLLWHPKMEVYVQLELETVRADDNVIIMGDWNAVVGEGQDKLAVRNFVFGKRDTRTKIVVFLTIILVLHASKILLKIMKKRLEALIAKYANETLYGFRKGRSTRDAIAALRVLGDRMINQGRCHDVAFIDYEKAFDNVQWKDLHYYNKSDVYEQRVQSTLHEGRTLRSRNRSSLTFEQCSIIPENRLSTGDCLNDLHNRGSSVSSIINELESPDSHVNKQSSKSNDNVNKVFMLDSIKNKLTNEPANQINSQETNNYSTYSNKKKSIVNINGVTVADSSRRDILEKFLIGVDKTEPEEEQGNQVTREMNNAVSLSKELNLDDLLNSKNDVTKSTLCVEENSTRELLPQQNEMKISIYDITVHTLDTAKTAPFDSKDRPVLKEDPIVKYSDTEIFDVSEFEKSECKSLTKLKELPFPKIKSNIDTKLSAKKKLNENKSDTDAMDKLFHSKTDTSVEKNVQNPAASRLSINDMQTTTKSMHSSKGKLSKKLITNFRKSKKFNFRNVLKRSCEIRKNHDSNDSKRGLFINKLKTDEDVVQLMKISDIINSNDKELQNETTTTTCDNSMHSSNEKLEKRRVIRKRKLGSTKPISPSHKSLETCINETEIANSDITVNQGESLKYLDVLNDVKVKSPTNSFEIELDVSDVHLQPENSSKIKYSEKFSPITKKKKLESLKNVQQFSNTIHESCVSNNCIKQNLSNVSAVKKFQKSANTRTSTIFKDYSLDKDNRSDDIGEDRSCRQRKISDCSPNNKCSTKLESFAETSSLALIQNKDNCVSYSSGTEKTSSQIERSKMLINTTEDSDVDSGETNAGNVANQLDESSDRITRKSTRIQRMCFSNVKTTTMESKTNISDKSITTTLTMTKKSDRQSPGTTSTSTFPDDTKSSRDGKMVNLVAEISSSLPTETVTTNNTVTAITTRRKNRMYNGVTSKKTVTVGSDDNGNRARIDGIMEAPTFYPNEKEFVDPMRYIESIQPIAEKFGICRIVPPSNFKPECKVIDEMRFMAYNQYVHKMLNRWGPNVKEMSAIKKYLLTQNIAFTRPPWIGGIEVDVPRLYQTVQQCGGLKEVIVKEKWQRVADLMKIPKSAQERLTKLDDVYCKYILPYDTLSEDERRKLLEQAEKDWRQFTKSRQINNKAYEEIGECVTKGRTMPLSSFYRIARNTMMMWFGNETEICPDVVEEEFWKHVSERKHHLCVNSGSIDSGPYGYGFPISKNSTCSKHPWNLKVLTNNTSSVIRSLGRIIGVTVPTLHVSMLFSACCWYRDPHGLPWIEYLHTGASKIW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -