Cimp049318.1
Basic Information
- Insect
- Cordilura impudica
- Gene Symbol
- stc
- Assembly
- GCA_963682025.1
- Location
- OY821518.1:199818616-199824295[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 2 1.3e+05 -4.1 1.6 15 19 605 609 604 609 0.81 2 12 0.059 3.8e+03 0.8 0.2 4 10 638 644 637 645 0.95 3 12 1.7e-05 1.1 12.1 16.7 1 19 650 667 650 667 0.93 4 12 4.8e-07 0.031 17.1 12.9 3 19 705 721 703 721 0.91 5 12 0.0001 6.6 9.6 17.3 1 19 761 779 761 779 0.97 6 12 1.9e-05 1.2 11.9 14.7 4 18 827 841 820 842 0.86 7 12 0.007 4.5e+02 3.7 9.3 1 11 882 892 882 893 0.96 8 12 2 1.3e+05 -4.5 1.1 4 10 897 903 897 903 0.58 9 12 4.8e-10 3.1e-05 26.6 15.5 1 18 909 926 909 927 0.97 10 12 2 1.3e+05 -14.6 18.0 9 18 973 983 960 984 0.72 11 12 6.3e-08 0.004 19.9 14.4 1 16 1020 1035 1020 1045 0.92 12 12 5.4e-07 0.034 16.9 10.5 1 18 1052 1070 1052 1071 0.89
Sequence Information
- Coding Sequence
- ATGTCAGCTGAACCAAAATCTCAGTCTTCATCACAACCACCCTTGTCACAACTATGGCCTGGTTTTGGTTCAACAACATCAGATCTTAATAATTCTACCCAGGACTCCAATTATGCCCAGCAAACCACATCGGTGGGGGtttataataaacaacaacagcgCTATCAACTAAGCCAGCAACCGAATAATAATTATGtgaattttaatcaatttataaTGCAACATAATTTGGTCTCTCCACCTCCTCAAGGAAAATCGGCCTTTACAACATCAATTCCATTTGATGTCGGATTTACTTCCAAAGTAGAGagacaaaattcaaattttgttgatGAATATGATTTTCTCAATATGGGAGGAAGTGGTTTAAATAACAATACCAACCAAAACAATATTAACAGCAATATCATGTCAGCTGTCACAAATAGTGACGATAGCAGAAATTCTAATCTGCCGCAACATTTTGATTATTACAATTCTTCTATACCTCAACAGTATCCATATGCAAACTATAATCAAACTTCCAACAACAATAGTATATTTTCGGATGGTTTACCAAACTACAATGTTAATTCCAACACAACACTCGGAGGAATAGAAACATCAGCCCCATCCAcatcaaatcaaaattattatgaTTCATCTAATTCATATAGCAACTTTAATTCCAATGGTACCACTTACTATGTCAATCCCTTTGCTACTGGATTCGATTTTACCAACACTAAATTACAAGCCGATGCTCCTGAATTTATGCCCAGATTTGAAAAACTTTCGTTGAACGAAGAATTAAAACAGCAATCTGAGCCGATTGATCAAGCTCCGATAGGGAAGAATATTACACAGCAGGATGAGTTTAATGAAGAGAAGAAAGATGTGGTTCGAGAACAAAATGACAAAGAGAAGATAATGGattcaagttttgaaaaagaaGAGAAGCGGGAACAACAGAGAAATGAGCGTACACGCAACAATCGTCAACAAAATAAgcatgaaaaagaaaataacaagagAAATAACCAACGAATGGAAAAGAATATGGAAAGATTTTCAAGAAATTTACAAGAGAAACAGAATAATGATTCGGTTTCGAATTCAAATTCTTCAACACCTTCGCTGTCGTTTAACGGAGGCCCAAGAGAACAACAAAGAGAGCCCAGAGAGTATCAGCAGCAACTACAGGGAGTTGCTTTCAATAAGATTGGAGCTTATAATAAAAATCGTTATTCGAATGGTGGTGGTTTAGGAGGAGAAGGCGGAGATGGAGATAAACAAAGAAATGAAGATACTTTTGATAAGGGCGATACGTCCAATTTCAATAAACGTTATCCAAATGGTAGACGTTCTCAAGATTTCACCACCGAACGTGAAGATCGATATGATCGTTATGTAGAACGTGGCGATCGTTCTGATCGTGGCCACAATCAACGCAACCAACAACGTAACGACTATCATCAGCGTTATGACAATTATCGCAGTAACAAGCGACGCGACGACTGGAATCGTAATCGTGATCGCATTAATGGTTTTCGCGTCGATGAGAAATACTCCAATGATAGTGTGAAAGATAGTCCTTTGCCCTCACCCGAAAAGAAATCACccaaaaaacaatatgaaaaagaaaacgaaaaacttTCCCAGCGGGAAAAACTCATAAGAGATATCGAGAATAGACGTCTGGAATGTCTGGTCTGTGTCGAACCCATTAAAGCCCACCAGGGTGTGTGGTCTTGTCACAATTGTTATCATATTTTACATCTACAGTGTATTATTAAATGGGCTTCTTCCTCCAAATCCGATGACGGTTGGCGTTGTCCAGCCTGTCAAAACGTGGAAAAAGATGTTCCTCGggattattattgtttttgtggaAAATTAAAGAATCCTTCCAACAATCGTCAGGATATAGCGCATTCGTGTGGTGAAGTTTGTGGTCGTGTGGAGGGTTGTTCTCATGCTTGTACTTTGCAATGTCATCCGGGTCCTTGTCCACCCTGTCAGGCTCAAGTTAAACGTGAATGTGGTTGTGGCAAGACTTCAAAAACTATGCAATGTTGCCTTAAGGAAACCATAGAATGTGATTCGACCTGTGAAAAACTTCTAAATTGTGAATTACACACTTGTAAGGAGAAGTGTCACGAGGGAAAATGTCCGGCTTGCAAGGAAAAAGTGGATCAGAAATGCCACTGCGCAAAACAAGAACGTCAAGTTACTTGTACACGCGAATCCCACGATAAGCATAATTATTCGTGTGGCAAACCTTGTGCTAAGGATTTATCATGTGGCAATCATAAGTGTAAAGATTGTTGTCACCCGAACGAGTGTAGAGCCTGTAAATTGAGCCCGGATTTGGTTACCTCTTGTCCCTGTGGTAAAATGCCTATTGTTGCTGATCAACGTAAGTCTTGCTTAGATCCCATACCCATATGTGAGggtgtttgtggtaaaacttTGAAATGCGGCAAGTCCACAAATCCACATCATTGCACTTCAAAATGTCATTTGGGCAATTGCCCACCTTGCAACAAGCAAACGGCTGTAAAATGTCGCTGTGGTCATATGGATCAAATGATAAAATGCCGCCAGCTTTCAACTAGAGCCGATGATGCTAGATGCAAAAAACGCTGCACTAAAAAACGTTCCTGTGGCAAGCACAAATGTAATCAAGAGTGCTGCATTGATATTGATCACTTTTGCCCACTGCCTTGTAATTACACGCTATCCTGTGGCAAACATAAATGCGATCAACCTTGTCATCGTGGCAACTGCCCACCATGCTATCGTTCTTCTTTCGAAGAGCTTTTCTGTGAATGTGGTGCTGAAGTCATTTATCCGCCGGTACCCTGTGGCACCAAGCGCCCCGTTTGTAAACGTCCCTGTTCGCGTAAACATCCATGTGAACATCCACCACAACATCACTGCCATTCGTCGGCCACTTGTCCGCCCTGTATGATTTTTACCATTAAATGGTGTTTTGGCCAACATGAACAACGTAAAACTATTCCTTGTTCGCAACAATGTTTCTCTTGTGGTCTGGCCTGTAATAAACCGCTACCTTGTGGTCGTCATAAGTGTATAAAAACATGTCACGAGGGTCCTTGCCAGATGCctggggaaatgtgtaaacaaaGTTGTACTACTGCTAGAGCTTCGTGTGGTCACAAGTGTATGGCAGCCTGTCATGACGGTGATTGTCCGGAGTCAGCGTGTAAAGAAATGGTGAGTTCAAATggagaatattttaaaactttttaa
- Protein Sequence
- MSAEPKSQSSSQPPLSQLWPGFGSTTSDLNNSTQDSNYAQQTTSVGVYNKQQQRYQLSQQPNNNYVNFNQFIMQHNLVSPPPQGKSAFTTSIPFDVGFTSKVERQNSNFVDEYDFLNMGGSGLNNNTNQNNINSNIMSAVTNSDDSRNSNLPQHFDYYNSSIPQQYPYANYNQTSNNNSIFSDGLPNYNVNSNTTLGGIETSAPSTSNQNYYDSSNSYSNFNSNGTTYYVNPFATGFDFTNTKLQADAPEFMPRFEKLSLNEELKQQSEPIDQAPIGKNITQQDEFNEEKKDVVREQNDKEKIMDSSFEKEEKREQQRNERTRNNRQQNKHEKENNKRNNQRMEKNMERFSRNLQEKQNNDSVSNSNSSTPSLSFNGGPREQQREPREYQQQLQGVAFNKIGAYNKNRYSNGGGLGGEGGDGDKQRNEDTFDKGDTSNFNKRYPNGRRSQDFTTEREDRYDRYVERGDRSDRGHNQRNQQRNDYHQRYDNYRSNKRRDDWNRNRDRINGFRVDEKYSNDSVKDSPLPSPEKKSPKKQYEKENEKLSQREKLIRDIENRRLECLVCVEPIKAHQGVWSCHNCYHILHLQCIIKWASSSKSDDGWRCPACQNVEKDVPRDYYCFCGKLKNPSNNRQDIAHSCGEVCGRVEGCSHACTLQCHPGPCPPCQAQVKRECGCGKTSKTMQCCLKETIECDSTCEKLLNCELHTCKEKCHEGKCPACKEKVDQKCHCAKQERQVTCTRESHDKHNYSCGKPCAKDLSCGNHKCKDCCHPNECRACKLSPDLVTSCPCGKMPIVADQRKSCLDPIPICEGVCGKTLKCGKSTNPHHCTSKCHLGNCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCTKKRSCGKHKCNQECCIDIDHFCPLPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELFCECGAEVIYPPVPCGTKRPVCKRPCSRKHPCEHPPQHHCHSSATCPPCMIFTIKWCFGQHEQRKTIPCSQQCFSCGLACNKPLPCGRHKCIKTCHEGPCQMPGEMCKQSCTTARASCGHKCMAACHDGDCPESACKEMVSSNGEYFKTF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -