Cimp066943.1
Basic Information
- Insect
- Cordilura impudica
- Gene Symbol
- nfxl1
- Assembly
- GCA_963682025.1
- Location
- OY821519.1:147207982-147211656[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2 1.3e+05 -8.1 6.4 15 19 154 158 153 158 0.82 2 20 0.13 8.3e+03 -0.3 0.4 4 10 189 195 188 195 0.95 3 20 1.8e-08 0.0012 21.6 16.0 1 18 203 219 203 220 0.98 4 20 1.5 9.5e+04 -3.7 2.6 6 10 246 250 245 250 0.89 5 20 0.00076 49 6.8 15.0 1 18 256 274 256 275 0.96 6 20 1.1 7.1e+04 -3.3 0.9 6 10 300 304 299 304 0.86 7 20 8.7e-09 0.00056 22.6 12.0 1 19 310 328 310 328 0.99 8 20 0.82 5.3e+04 -2.9 0.5 1 8 353 359 352 360 0.50 9 20 8.7e-09 0.00056 22.6 10.9 1 18 363 380 363 381 0.96 10 20 0.32 2.1e+04 -1.6 0.5 1 5 390 394 390 399 0.75 11 20 0.00039 25 7.8 14.7 1 18 415 432 415 433 0.98 12 20 1.6e-10 1e-05 28.2 14.5 1 19 442 460 442 460 0.98 13 20 0.16 1e+04 -0.6 11.7 9 19 505 515 497 515 0.85 14 20 0.0016 1e+02 5.8 3.8 1 11 527 536 527 537 0.95 15 20 0.32 2.1e+04 -1.6 0.9 6 10 596 600 595 600 0.90 16 20 3.8e-06 0.24 14.2 5.7 1 12 606 617 606 617 0.97 17 20 0.18 1.2e+04 -0.8 0.9 5 11 632 638 632 639 0.94 18 20 8.1e-05 5.2 9.9 14.2 3 19 646 662 645 662 0.92 19 20 2 1.3e+05 -5.5 2.1 9 13 668 672 667 672 0.72 20 20 2.8e-07 0.018 17.8 12.9 1 18 713 732 713 733 0.91
Sequence Information
- Coding Sequence
- atgCCACCAACAAAgaataaacaaacaaattcaacacaaaaatttaatgaagcaCACGCACGTGACATAGAAGTCGCTAAAAAGATAGTAGAAAACTATATCTCCTCTTCCGAAGATGAGGATGAGTTAGATGAAAAAACCATATTAAAATCCTTATATCAACATTATAACACCCTTAAAGAAGATGAACATTTGCTAGCAAAGACAGCaggctttttggaaaatattctaCAATCTGGTGCCGCTACGTGTCTCATATGTATTGCAAGCATAAAAAGAGCTGATGCTATATGGTCATgcaattattgttattgttttttccaTCTTAATTGTATACGAAGATGGGCAAATGATAGTATGGCTCAGGCAAAGGCTCAGACCCAAAATGAACAACAGGGCTATTATAATCATATGGGAGAATATATAGCACCCAAAAAAGCTAAAGCATTACATTGGTGTTGTCCACAATGTAGAAGAGAGTTTCAGCCCGAAGAACGGCCTTCTGAGTATGAATGTTTTTGTGGCAATGAAATAAATCCACCCTCACAACCATGGTTAGTTCCCCACTCGTGTGGTGAAATTTGTAACAAAGCATTGCAGCCGAATTGCGGACATAAATGTACATTGCTTTGTCATCCTGGACCATGCCCCCCTTGTGCCCAATATGCCGTAACATCTTGTAAATGTGGAAAATCTCCATCGAAATCAGTACGTTGTGCCGATAAGTTATGGGAATGCCAACAGAAATGTCAGTTATTGCTCTCATGTGGAGAACATGTTTGTGGAAAGATATGCCATAAGCCCAATCAATGTCCACCCTGTAATCAAACCAGCAAGCAACCATGCGAATGTGGCCGTGAAAAGGCCAAACGACAATGCTGTGATCTGGAATGGCATTGTAAAAAACCGTGTGGCAAGGCATATGAATGTGGTTTACACTATTGCAAAAAAGTATGTCATTCTGGTGAATGTGGAGATTGTCCTCTAAGTCTACCTCGTTCTTGTCCTTGTGGTAAAACtAAAAAGATCGGTCCTTGTTCGGAAGTAATAGATACTTGTGGAGATACTTGCCAAAAAGTTTTAGCTTGTGGCATTCATACTTGTACCCAAAGATGTCATaaaggaaattgtaatttatgtttaattattattaaaaaaaaatgtcgatGTGGTATGCACCAAAAGGAATTACCGTGCTCAAAGGAATTTAACTGTGAAACTAAATGCAAACAAACTCGAGATTGTGGTAAACATCCATGTAATCGCAAGTGCTGCGATAGAAATTGTGCACCTTGCGACAAAGTATGTGGTAAACCGTTATCATGCGGTAAACATAAATGCCAATCAATTTGCCACAAAGGACCCTGTTACCCATGTCAACAAAAGTCACAAATTAATTGTCGATGTGGTAAAACTAAAAAGAGTGTACCCTGTGGTAGAGAACGTACAGCACGTGTGATATGTTTGGAACCATGTCGaatACCTTCAAAATGTCATCATAACAATAAACATCGCTGTCATAAAAACGAATGTCCTCCATGTTCACAACCTTGTGGTTTACCCAATGATACTTCTAAATGTGGTCATATGTGTATGGCTAAATGTCATGCTGCAGTtaaagtggtaaaaaaaattaatacagatACTGCCAGCATATGGGAACCCAGAAAGCAGTTTGAATGGAAAGCTTTGCCTCATAATCGCTGTGAACAAAAAGTCTCTGTAACTTGTATAGGCGGTCATGAAGTAGCCGAATGGCCATGTTGGAATTCTAAGCCCAGTTCCTGTCAACGGCTATGTAATCGTTTATTAAGTTGTGGCAACCACAAATGTTCTTTAGTATGCCATTCTGTACAAGATTTAAAAGATATGAaggaACAACCTGGTTGTCGTAAGTGTACTGAAGGTTGTCATATAAAACGTCCTGAGGGCTGCACTCATAACTGTCCTAGACCCTGCCACGAAGCTCCTTGTTATCCCTGTAGTGTTGCTATAAAAACTAAATGCCATTGTGGGTTAATGCCAGTCGTTTACAAGTGTAGTGATTATTTCAACGCAGAAGGTGGAGAAGGTGAAATTTTGGAAAGACAAGAAAATTTAAAGAGTTGTGGCAATAGATGTTtgaaaaatTACCCTTGTGGCCATCGCTGTACTGCCAAATGTCATTCGGGTCCCTGTCCTTATCCTGAATCATGTCGCAAAAAGTTACGCATCTTCTGCGATTGTAAACTTCTAAAATCTGAAATTTCTTGTGATAGACATCGTGCAGGTCTATCCAAACTAGTATGTGATGCAAACTGCCTTGAAACGCAAAACAAAATGGAACATGCACGCAAAAAGGAAGAGGAACTATTAAGGAAACAAGAAGAGGATCGTAACCGTTTAGAAGTTGAACaatttgaaaagaaatttacTAAACGTAAGCCTAAAGAACGAAAAACCTTAGATGTGCAACATAAAAATCCCATCAATTGGAAATCATTTGGTTTGTACGCCGGCATTTTTGGAGCTGTTGTATTAGCTGTAGCCTTAGCTTTTTATGAAGAACATTAG
- Protein Sequence
- MPPTKNKQTNSTQKFNEAHARDIEVAKKIVENYISSSEDEDELDEKTILKSLYQHYNTLKEDEHLLAKTAGFLENILQSGAATCLICIASIKRADAIWSCNYCYCFFHLNCIRRWANDSMAQAKAQTQNEQQGYYNHMGEYIAPKKAKALHWCCPQCRREFQPEERPSEYECFCGNEINPPSQPWLVPHSCGEICNKALQPNCGHKCTLLCHPGPCPPCAQYAVTSCKCGKSPSKSVRCADKLWECQQKCQLLLSCGEHVCGKICHKPNQCPPCNQTSKQPCECGREKAKRQCCDLEWHCKKPCGKAYECGLHYCKKVCHSGECGDCPLSLPRSCPCGKTKKIGPCSEVIDTCGDTCQKVLACGIHTCTQRCHKGNCNLCLIIIKKKCRCGMHQKELPCSKEFNCETKCKQTRDCGKHPCNRKCCDRNCAPCDKVCGKPLSCGKHKCQSICHKGPCYPCQQKSQINCRCGKTKKSVPCGRERTARVICLEPCRIPSKCHHNNKHRCHKNECPPCSQPCGLPNDTSKCGHMCMAKCHAAVKVVKKINTDTASIWEPRKQFEWKALPHNRCEQKVSVTCIGGHEVAEWPCWNSKPSSCQRLCNRLLSCGNHKCSLVCHSVQDLKDMKEQPGCRKCTEGCHIKRPEGCTHNCPRPCHEAPCYPCSVAIKTKCHCGLMPVVYKCSDYFNAEGGEGEILERQENLKSCGNRCLKNYPCGHRCTAKCHSGPCPYPESCRKKLRIFCDCKLLKSEISCDRHRAGLSKLVCDANCLETQNKMEHARKKEEELLRKQEEDRNRLEVEQFEKKFTKRKPKERKTLDVQHKNPINWKSFGLYAGIFGAVVLAVALAFYEEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01313435;
- 90% Identity
- -
- 80% Identity
- -