Cimp005468.1
Basic Information
- Insect
- Cordilura impudica
- Gene Symbol
- FAM200B
- Assembly
- GCA_963682025.1
- Location
- OY821517.1:34482898-34491973[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.7 2.7e+04 -2.4 0.0 8 18 48 58 47 61 0.70 2 3 0.4 6.4e+03 -0.4 0.1 12 26 67 81 65 83 0.85 3 3 8.7e-20 1.4e-15 59.3 4.7 1 35 234 267 234 268 0.98
Sequence Information
- Coding Sequence
- ATGGATAAATGGTTGAAAAAAACTGCTGCACAAAAACAaacaattggaaatgaaaaagaaaaggaaaaagatAAACAAAGCACTGTAGAAACCAAAATAGATAAGAGAAAATTTGGCGAGAATCCTTCAACAAGTATCCAAACATCAAAACGTTGGAAAAGAAAATACGATTCTGAATATCTAAAAATTGGATTTACATGGAATAATAAAGAAGATGATCCACGTCCACTGTGTGTTATTTGCCAAGAAGTTCTTGCTAATGAAAGTATGCGACCTAACAAATTATTACGACATTTTGAAACGAAACATccagatttaaaaaataagacaatggagtattttaaaactaaattacagGAATTAAATCATTCAAAAAGAGTACTTTCGCACTTCACCAGCATTAGCGAAAAGGCCATGTTCGCCTCATATCTCATTAGTTTGCGAATTGCACAATCTGGTAAACCACACACCATTGGAGAGTCATTAGTACTTCCAGCGATAAAAGATGTTGTTGGAGTTATGTATGGAGAAAAAAGCTTGAAAGAAGTtgattcaattccactttcgaataACACAGTTGCTCGTAGAATTGATGAAATGTCCGAATGGGTAGAAAATCAGCTTATCCATAGAATTCAGGTTAGTGGACTTTTTGCGCTGCAACTGGATGAATCAACGGATGTACAAGAAGGCCGTGAATGTGTAAATTGTGGTGCCACCTCAACGCCATTATGGCGACGCGATGGTACCGGTCACTATTTGTGCAATGCCTGTGGTTTATATTACAAAATGAATGGTCAAAATCGACCACTAATTAAGCCAAAACGAAGACTGGTAAGTTTATTatag
- Protein Sequence
- MDKWLKKTAAQKQTIGNEKEKEKDKQSTVETKIDKRKFGENPSTSIQTSKRWKRKYDSEYLKIGFTWNNKEDDPRPLCVICQEVLANESMRPNKLLRHFETKHPDLKNKTMEYFKTKLQELNHSKRVLSHFTSISEKAMFASYLISLRIAQSGKPHTIGESLVLPAIKDVVGVMYGEKSLKEVDSIPLSNNTVARRIDEMSEWVENQLIHRIQVSGLFALQLDESTDVQEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLVSLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -