Cimp026652.3
Basic Information
- Insect
- Cordilura impudica
- Gene Symbol
- srp
- Assembly
- GCA_963682025.1
- Location
- OY821517.1:287870764-287895041[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-07 0.0036 19.6 0.1 1 15 227 241 227 246 0.93 2 2 5.7e-20 9.1e-16 59.9 4.4 1 36 299 333 299 333 0.97
Sequence Information
- Coding Sequence
- ATGAAACATATAACGCTATTACAACAAAACTACGAACGTAAAACCAGAGAAACAATGTTTTTTTCTAATTACAATAATATGTATTTGAAAAACTACTGCTATAGTTCAGTCTATGCAGCACCCTTGTTAGCAACGGCAGCCAATGGCTTGCAGTATGGTATGcaggcaacaacaacaacatcacctCCTCAGCACTCTGCAGCGGCTGCGACATGTGGTCAAGCTAGCGCTAATGGGGCGCATACACCAACGGCAACAACAATAGCTAATACGAATGGTGCTAGCAATAATAATGAATCACATTCCTCTGCCACGGATGATTATGGTTCACCCAAAAGTACACATAGTAGTGGTGGTGCCCTGCCAGCATTCCAACGCATTGCCTCCGTCTATGGGAATGGCACAAATGCAACAGGCGTCGATCGTTATACATCGTTAAGTAATTATAGAACACATAACGATGCTTGGTCTAGTCCGTATGAGGCCATTAGTTATGCTCCCTCATCGGTGGTAACTAATCAAGCTTTGAATAATGCTTTGAATGCGGCCAATACAAATGTTATACGTGCGGTCGTTAATGGTCGCTCTACATCAGCAGCGTCTGAGGCTCATTTGTCAGCTTCAGCTTCACTTTCAGCTAcattttttgaTGCCGATTTATTTACGGAGGGGCGAGAATGTGTCAATTGTGGTGCGATTTCAACTCCATTGTGGCGACGTGATAATACCGTGGCCGCTGAATCAGGCGGGGATTTCTATAAGACCTTTCCGTATAATGTTACAAATcggaacagcaacagcaacaacaacagcactaCCAATATTAAAGAGGAACATGTTGTTAGTCGCGCAACTTCGCGGCGATTGAGTGCCTCCAGACGTGCTGGTCTAACATGCTCCAACTGTTTGACTACACAGACTTCTCTGTGGCGTCGTAATCCTAATGGTGAACCGGTATGCAATGCTTGTGGTCTTTATTATAAATTGCATAGTGTTAAGCGACCACTTACAATGAAGAAGGACACTATACAGactcgTAAACGTAAACCCAAGGGATGTAAATCCGAAAAGTTATCAAAGAAACAAGCCGCAGCAAATGCAGCTGCCTCATCGGTTGAACATACCATAAACTCAGTCAATAATtccataaataataatttaaattgcaGTGTGGAAAGTGcaaatggcaatttaagtttGTTAAATGGCGACAATGATGTTAAACCTTTAACACAACAATTATTAAATACATCAACGTCATCATTAACACAATCGGCGGCTACATCACCCACGAATAGTATATCATCGCCTTGTAATAATCATAGCATGAATATGTCACCAACATCACCGTTACTGCAACAAGAGCAGCAACACAATGTGGACAATTTGTCACCACAGCAAtatcaacagcagcagcagcagcatcaacaaTCACAACAAATATCACCCAATATGtttcagcagcagcagcaacaacaacatacatCAGCCTCATCATCACCAACAAATCATttgaataataacaataataataacaataacaatcacacAGCAACGTTTAATCATAacgataatgaaaatttgaaatttatgcaaaaatatatacaacaacagcaacaacaggaACAACTTATGAATGCCgtacaacaacagcagcaacaacataccgcaaattccctgatgaatccGAGTTcacccaacaacaacaacaacacatcgCCAACGACACCAACAACAAAATGTTTAACACCCAATTCTCAAACCCAACAAtatctacaacagcaacaacaaatacatcagcagcaacagcaacaacaattgtCAGCCAACAATCAACATCACCAACAAACTCTGCATTTATCAGCCAGCCAGCAGATCAACAACAATCATAGTCCCTTGAATACATTCCATCATGAACCAAATCAAAACTCACCATCCACCTCGCCGGCCTACGAAAGTTATGGTCCAGCCACAACAGAAACGACCAGCATTAAACTTGAACACTTACATCAACATCAACACGATCATCAACAACTgcatcagcagcaacaacaacttgTGCAAGCACAATTAAACAATATGAGTCGTAGTCCCTCCATGGATGAGGAGTATGAATATCACCAACGTTCTCAGTTTCTAAtacaacatcatcaacagcattTACTTGATTtgcagcaacaacagtttttgcAATTTGTCCCACAACATATGCATGATTTTGGTAGAAAATTTGAACGGGAAACTgttgttaaaatggaataa
- Protein Sequence
- MKHITLLQQNYERKTRETMFFSNYNNMYLKNYCYSSVYAAPLLATAANGLQYGMQATTTTSPPQHSAAAATCGQASANGAHTPTATTIANTNGASNNNESHSSATDDYGSPKSTHSSGGALPAFQRIASVYGNGTNATGVDRYTSLSNYRTHNDAWSSPYEAISYAPSSVVTNQALNNALNAANTNVIRAVVNGRSTSAASEAHLSASASLSATFFDADLFTEGRECVNCGAISTPLWRRDNTVAAESGGDFYKTFPYNVTNRNSNSNNNSTTNIKEEHVVSRATSRRLSASRRAGLTCSNCLTTQTSLWRRNPNGEPVCNACGLYYKLHSVKRPLTMKKDTIQTRKRKPKGCKSEKLSKKQAAANAAASSVEHTINSVNNSINNNLNCSVESANGNLSLLNGDNDVKPLTQQLLNTSTSSLTQSAATSPTNSISSPCNNHSMNMSPTSPLLQQEQQHNVDNLSPQQYQQQQQQHQQSQQISPNMFQQQQQQQHTSASSSPTNHLNNNNNNNNNNHTATFNHNDNENLKFMQKYIQQQQQQEQLMNAVQQQQQQHTANSLMNPSSPNNNNNTSPTTPTTKCLTPNSQTQQYLQQQQQIHQQQQQQQLSANNQHHQQTLHLSASQQINNNHSPLNTFHHEPNQNSPSTSPAYESYGPATTETTSIKLEHLHQHQHDHQQLHQQQQQLVQAQLNNMSRSPSMDEEYEYHQRSQFLIQHHQQHLLDLQQQQFLQFVPQHMHDFGRKFERETVVKME
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -