Basic Information

Insect: Cordilura impudica
Gene Symbol: ZNF646
Assembly: GCA_963682025.1
Location: OY821520.1:135084167-135086308[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.011 3.2 11.1 0.9 2 23 404 426 403 426 0.95

2 10 0.018 5.5 10.4 0.9 6 23 435 452 435 452 0.99

3 10 0.0018 0.57 13.5 4.8 1 23 458 480 458 480 0.99

4 10 0.00042 0.13 15.5 1.7 1 23 487 509 487 509 0.98

5 10 0.023 6.9 10.0 2.0 1 23 517 540 517 540 0.91

6 10 4.3e-06 0.0013 21.7 0.5 2 23 547 568 546 568 0.96

7 10 0.00029 0.09 16.0 0.7 2 23 577 599 577 599 0.97

8 10 6.8 2.1e+03 2.2 0.2 3 23 609 630 607 630 0.75

9 10 2.7e-06 0.00083 22.4 3.7 1 23 636 658 636 658 0.97

10 10 0.00025 0.077 16.2 3.9 1 23 664 687 664 687 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.011	3.2	11.1	0.9	2	23	404	426	403	426	0.95
2	10	0.018	5.5	10.4	0.9	6	23	435	452	435	452	0.99
3	10	0.0018	0.57	13.5	4.8	1	23	458	480	458	480	0.99
4	10	0.00042	0.13	15.5	1.7	1	23	487	509	487	509	0.98
5	10	0.023	6.9	10.0	2.0	1	23	517	540	517	540	0.91
6	10	4.3e-06	0.0013	21.7	0.5	2	23	547	568	546	568	0.96
7	10	0.00029	0.09	16.0	0.7	2	23	577	599	577	599	0.97
8	10	6.8	2.1e+03	2.2	0.2	3	23	609	630	607	630	0.75
9	10	2.7e-06	0.00083	22.4	3.7	1	23	636	658	636	658	0.97
10	10	0.00025	0.077	16.2	3.9	1	23	664	687	664	687	0.96

Sequence Information

Coding Sequence: ATGGAGCAATGTATTGTTTGTTTAAAGTGCAATGAGGACACATTTTCACGCATTAACATCAATTCGAGTGAGTGGAATGAATGCAATATTCAACGCATCATTGAAAAACATTTGTGGTGGTGGTACCCAAAAAAGTCTACTACAAGTTCTGTACAATGGATATGTGGACAATGCTGGCAGGAGCTATCATCATTTCATAACTTTTATCGTACAATTGTTCAACTTCACAGGCAATACCAGTCAATGTTGACTAGCTGTGTAATATCggaaatttatgataataaactTAGGAATCGAAAATCAACTGAGAGTAATGACGATGTACAAGAAATTAGTATTGCAGATGTCAAGAGTGAATTTCGATTTCAAAGCAGTGATAATGAAGACAAAAATGAACGAAAAATTAGGAATCGAAAATCAAGTGAGTGTAATGCCAATATACAGATTGAAGaaattaatattgtagatgtCAAGAGTGAATTTCGATTTGAAAGCAATGATAATGGAGACAAAAATGAACGAAAAATAAGGAATCGAAAATCAAGTGAAAGGAATGCCAATGTAGAAAGTGAAGaaattaatattgtagatgtCAAGAGTGAATTTCGATTTGAAAGCAATGATAAAGGAGACAAAAATGAACGAAAAATTAGGAATCGAAAATCAAGTGAGTGTAATGCCAATATAGAGATTGAAGaaattaatattgtagatgtCAAGAGTGAATTTCGATTTGAAAGCAATGATAATGGAGACAAAAATGTACGAAAAATAAGGAATCGAAAATCAAGTGAAAGGAATGCCAATGTAGAAAGTGAAGaaattaatattgtagatgtCAAGAGTGAATTTCGATTTGAAAGCAATGATAATGGAGATAAAGTTTACTATCAATGTGGCGATACAGAAAAATCTGCAAAATATGAAGTAGATTCTCCAGACATAGATACTAAAGATTTTGTAGATACTAACTGTAATGACTCTGAAGAAAGTAACCATGTTGCAGGCTGTGGCATTGAAGACAAGATTTTAGTTCCATTTACAAAGAATGCTAAAACCAAACTCATACAGAAGAACAAAAGAAAAGCCCTTACAAAAACTAAATCTGTTAAAgcaagttcaaaaaaaaataaaacaaaacataaatccgaggtaaaattaaataagttagtTAATGATGACTTTTTTAAGGAGTCTCAACATAAACTTGAGTGCAGTATTTGTAATAAATCACTGTCAGAGTTTCGTACACTTAAAGAACATTTTCGTAATGAGCATAATATTTGTGGATATGCTTTGTGTTGTGGAAAAAAGTTCTTTAAACGACATTTACTTATTGACCATATAAATGTTCACAAAAATCCGGAGTATTTTAAATGCAACCtttgtaacaaattatttaatttacgtCGTTGCTTAGAAACTCACATAAAAACTCATGCTCAACGAGAACGTATTTTCCGATGTGAAGATTGTGGGAAATCATATTTCACAGAAAAAGTTTTCGAACGTCACAAGTTATCCCATGTACCAGAAGATGAGAGAAATTTCCCATGCAACCACTGTGACAAAAAATTTGCAGCTAGGTATCTGCAACTGCAGCACGAAACTACTacacacaacaaaaaatattttaaaagttgtgatatATGCGGCAAATCATATCGAGATAACTTTTCACTTCTTCGTCATATGGAAGAACATGCTGGTGCTACACCTTCTTTCGAAACTTGTAACTTATGTGGTGTAAAGCTGACTAATAAATATGCCTTAACACAGCACATAAAAATGAGACACAACGAAGAAAACTTGCAAGAACCAATATGTCCTTTTTGTTCAAGAGTTTCACCTAATATAAATGCTCATCGCAAACATATACAATACGCGCATACTATGGAACGCAAGCATTCCTGTCATATGTGTGATAAATCATTTAAACGTCCCGTAGAATTAAGAGAACATCTAAGCACTCACACTGGGGTACCATTATATACATGTCCTCACTGCCCGAAAACCTTTTTTTCGAATTCTAACAAGTATACACATAGGAAACTTGCTCATCGCAAAGAGTGGCAAGaggaaagattgaagaaatttaACAAACCTCGTAGAAAGCTGCTATCATCTggtttaaatgaataa
Protein Sequence: MEQCIVCLKCNEDTFSRININSSEWNECNIQRIIEKHLWWWYPKKSTTSSVQWICGQCWQELSSFHNFYRTIVQLHRQYQSMLTSCVISEIYDNKLRNRKSTESNDDVQEISIADVKSEFRFQSSDNEDKNERKIRNRKSSECNANIQIEEINIVDVKSEFRFESNDNGDKNERKIRNRKSSERNANVESEEINIVDVKSEFRFESNDKGDKNERKIRNRKSSECNANIEIEEINIVDVKSEFRFESNDNGDKNVRKIRNRKSSERNANVESEEINIVDVKSEFRFESNDNGDKVYYQCGDTEKSAKYEVDSPDIDTKDFVDTNCNDSEESNHVAGCGIEDKILVPFTKNAKTKLIQKNKRKALTKTKSVKASSKKNKTKHKSEVKLNKLVNDDFFKESQHKLECSICNKSLSEFRTLKEHFRNEHNICGYALCCGKKFFKRHLLIDHINVHKNPEYFKCNLCNKLFNLRRCLETHIKTHAQRERIFRCEDCGKSYFTEKVFERHKLSHVPEDERNFPCNHCDKKFAARYLQLQHETTTHNKKYFKSCDICGKSYRDNFSLLRHMEEHAGATPSFETCNLCGVKLTNKYALTQHIKMRHNEENLQEPICPFCSRVSPNINAHRKHIQYAHTMERKHSCHMCDKSFKRPVELREHLSTHTGVPLYTCPHCPKTFFSNSNKYTHRKLAHRKEWQEERLKKFNKPRRKLLSSGLNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -