Cimp080511.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cordilura impudica
Gene Symbol
RREB1
Assembly
GCA_963682025.1
Location
OY821520.1:76365965-76373077[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.025 7.7 9.9 1.1 1 21 226 246 226 248 0.95
2 12 0.00055 0.17 15.1 0.2 1 23 258 280 258 280 0.98
3 12 3.8e-05 0.012 18.8 7.5 1 23 286 308 286 308 0.98
4 12 0.018 5.6 10.3 1.6 2 19 579 596 579 596 0.98
5 12 0.032 9.7 9.6 0.0 1 23 751 773 751 773 0.97
6 12 1.9e-05 0.0057 19.7 1.2 1 23 783 805 783 805 0.99
7 12 0.0014 0.41 13.9 2.0 1 23 811 834 811 834 0.97
8 12 0.0048 1.5 12.1 2.0 1 23 1202 1225 1202 1225 0.95
9 12 0.00029 0.09 16.0 1.0 3 23 1569 1589 1567 1589 0.97
10 12 0.24 72 6.8 6.3 1 23 1595 1618 1595 1618 0.97
11 12 0.14 42 7.6 1.1 3 23 1796 1816 1795 1816 0.91
12 12 0.0022 0.67 13.2 4.8 1 23 1822 1844 1822 1844 0.99

Sequence Information

Coding Sequence
ATGTTGGCCACGACAAATGCCATTACAGCAACTGCGCCGGCAACTCCCATTAAAATGGAAAGACGTGACTCGAACTCATCTGAATCATCTTTGGAACATTTAGATTTGGGACGTGCTGCTAAGAAATTAAACGCAATTACCTCGACACCTTTAGTAACTAGTGATGCCACCGTCGCTTGTAGTAAAAATTCTATAGCAAATGCAACTATGCTGGCCAGCCATCGAGCGGATTTGGAAAGAGAACATCTGAGCCTGCAGCATCGCATGCAGGAATCCGATGAGACTAACGATTATGATGAGGATGATTCGGCCGATGAAAAATCAGTGCAACCCCGACAGCAATTGCAACATAAACGTCGTTTGAGCGGTCGCAGTCTCTTGGATAAAACTACCAGTGTACAATTGGAGTATAATGCCGATAATCCCAATTCGTTGCGTAAGAAATTCCGCTTTAATCGCAATCTAGTGGATTATAGTAATGAATCGGGTTTCATTGATGCCAGCAATGCTAGTCAGCTAATGAATTCGGCCACCTCGTTGACGGCCACAACGACAGAAAATCAAACTGTTCAACTCAGTTCAAAGTCAAATAGTTGTTCGGATAGCTCTTCGCCTCCCCAGAGTAATGGTAATTCTAGTCCTGAATCGGCGACGGGTGAACGTGAGGACATGAAATATATGTGTCCAATATGTGAGGTGGTTTCGCCCACGGCTCATCAATTTACAAATCATATACGCTGTCATAATTATGCCTCAGGGCATACAGAAAATTTTACCTGCCGTATTTGCTCAAAGGTACTCTCATCTGCTTCATCATTAGATCGTCATGTTCTAGTGCATACTGGAGAGCGGCCATTCAATTGTAAATATTGTCATCTCACCTTTACCACAAATGGCAATATGCACCGTCACATGCGTACCCATAAACAGCATCAGCATACTCATCATCGGCGGAACTCGAATGGAACAAAGTTCAACTCgtcaaacaataataataataataactctagtaataataacaacaataataatagtaGCAATAATGGTGGTAATaattcaacaacaacagcagcattaGCAACAGCAGCTGTAAATAAACATACGTCAGCAACAACATTAACCAATGGACAATTAAGTGAAGGCTTGAAATTATCAACAGTGGCAACGGTGCTAACAACCGCAGTAGAAGCTGTAGCAGGTAGCACAGCGAAAAATTCATCATCAGACAATGATAATAGTCAGAAGGCAGCAGCAGCAATTATGAACAAGACGACAACAGCAGGTGCTAATGGTAAACGATTAAATAATGGTAACGCTGACATAGAAAGTTATGAAAGTGATGGTGGCTGCTCATCAGATTCATCTACGGGCcacaacaacaaacacattaataataataataataacaacaacaacaacaataacaataactttAACGcccacaataacaataataatgatatgaaaattaacaataataactATAAGCGTAAACACACTGATTACGACGATGATCTAAACCATCATCGAGATATTGAAGATGCTGGCGACGAGAATCATGATCTCTTGAGACATCGTTTGAAAGCCAACAGCAACATTGTAAGCCGCTCTGAACATGTAGCCGAAAATAAAACAAACGATTCTCTGGTTTGTCCCGTCTGCAATGAGAGTGATTTTCTAGATGTTCTCGGCTTGGACCAACATATGGATGGTAAACATCCAGAAATACCAGCCAAATGTAAAGACTGCGATGTTATATTTCGTACACATCATCAGCTGAACATACATCCGTGTTCGGCTGATGTTAAATGTCAATATGAAGGGGATCATCAAAGTGGCCACAATTTCTCGATGAAAAATAGCCATTATAGTGAAAGTTCGGCTCAACACAACaatgacgacgacgacgacgaagCTCATGAAGCATCCGAAGAACAAATGCGGCAGCGCCAAGAACTCATAAAACATTTGCAGAATGCTATGGCTCATACTAGTTCACCGGCATCGCATCATAATCAAGACTTAACCGAAGATGATATTAAGTCTGAGCCGTCAGCTCATGATTCTAAAGATTTGGCCGATATTCAATCGATATTGAATATGACATCTTCTTCAAGCACttcaaattttcttaagaatttcgAACAGTCTGTTAATACGCCATCTTCGCAATATAGTTATGATAGAGATGAAGAAGAAGCACAAGATGCTTTTACCTCGGAATTCCGCAAGATGAAGTTACGTGGTGAATTTCCCTGCAAACTATGTCCGGCCGTTTATCCCAATTTGAGGGCTTTAAAAGGTCATAATCGTGTTCATTTAAGTGAGGTGGGACCGGCCGGACCCTTCCGTTGTAATATGTGCCCCTATTCTATATGTGACAAGGCTGCTTTGATCCGCCATATGCGCACCCATAACGGCGATCGTCCATACGAATGTGCCGTCTGTAATTATGCCTTCACTACGAAAGCCAATTGTGAACGTCATTTGCGTAATCGTCATGCCAAAACTAGCCGAGAAGAAGTTAAACGTGCCATCATTTACCATCCTTCAGAAGATTCATCCTGCGATGATCCCTCGAAGAAGTTACAGATGTTTTCTTCGCCCGAGATGGAGGATGAGTGTGATATTATGTCTTATCAACATCAACCGAAAGATCGTTCGACACCGGTGTCTCACCTTAAAGAAATGTTGACCTCGGGTGACAGTCCCTCCTCCAAACCAGTTAAAATACAAGTGAAGAGTCTAGACGATCTCTTGGATAAATCATCAGCCTCCTCGGGTTATCACGATAGCTATGATAAACGGAATATTGATACTTCCGAGGCTCCCATAGATATGAGTATGGatgttttggatttaagtaaaaaGCCAAGCATGCCAATAACCACACCCACTGTGCCAGTAGAAAAAGTTGTTGTTCCTCCAGTTGTACCATTACCTCTGCCACTGGCTTTAACAGTACCCAAGTTAGACGATAAAATTTCGAGTGATATTTTGAATAACAAAGTTATTCCTAGTGTGCCTACGCATACAGATCCCAAATTGGATGTAACatctttggaaaaacaacaacaacaatttttattaGCTCAGCAACAACAATTGCTGAACGACCCTACCCAATTTTTCCAGCAATTATATCGTAATTTACTGTTTCCTCCCTTCAATCCCTTCTTGATGCCCAATTCTTTTATGCCATCGAACTTGGCCGATTTCCAAAAATTTGCTCCTCTTCTATCGAGTATGATGGGTGGAGCCGCAAGAACACCCCTACCAAATCCTCAGGAAATTGAAAAACCATCCCCTTTACCCACTCAAATTGCCCATCCAAAAACTTCTAACTTGGCCCCAATAAGTCCTATGATGTCAGAAAAATCCAGCTCAGCTTCTTTGGCATCAATGTCGTCACCCAAAAGTCTACTCTCACCAAATCCAAATCATTTAAATATCTCACGACATATGGTGGCACCAACTACGTCCACACAACAGTCAACTCATATGCCTTCATCTATGCTTTCAAATGGCCCCGTCAAAATGGTGCTGAAGAATGGTGTCTTTATgcctaaacaaaaacaaagacgTTATCGTACGGAACGTCCATTTGCCTGTGAACATTGTTCGGCTCGTTTCACTTTGCGTTCCAATATGGAACGTCATGTTAAACAGCAACATCCTCAGTTCTATGCTCAACGTCAACGCAGTGGCCATCATGTTATGCGCGGTCGTGGTGCTAGCAATGCGGCTAATATGAATGGCATTACTCACTTACAGGCTTCTGCTGCACAATCTCATTATGGATCAACACCACCTTCGATGTCGTCGCATTCTCCCATATCAGATCAAGTTAAATGTGCCATATTGGCACAACAACTCAAGGCACGCAAAGATACTGATCTCTTACAGCAGGCTTTGGCTTATGGTTCGAATAGTGTAGTCAATCCTAACATGTTTGCCAATCACGTTCAAAATCTCAGCAATGGTCAGACACCATTTGCCTACaatcagcatcatcatcatcatcatcatttgaATCAAAGTGGTACTCCCAACGGTTCTATGGAAGATGATGAACCTAAATTGATTATCGATGAAGATGACGACGAGGGGGAAGAGGAAGATGATGAGGATATTGAAGAAATCCCCGATGATGATCAAGAAGAGGACGAATACCATGATGTTACTTTAAGTGAGCGACAAGATAAACCAGAGGATCATCAATTGCCAACGACCGTAGAAGAAGTTAAACTGAAGGCCGATGAACCTCAAGAGTCGGCTAAAAAGGTGGCTGAATCTATTTTGGAACAAGCAATTAAAGCTGGACAAAATATGTCTCCCTTTGCCACAAAAACCACCGAATCTACTCCTGCTGTATCCTCCACTAACAATACCATGAAATCAATGATTGCTCAAGCTCCGGCCGTAGGTAAATTCCTAAAAGAAGTGGCCAGTTCTCCTTTCAAAGATGAATCTCAAGATTTAGTATCGGTGTCTGAGTTGGTAGACAATGCTACAAGTAATGCTGTATCATTCAATAGCTATTTCCGTCCTTCAGATGTGGCCAATCATATGGAACCAAGTGACGAAGACGGTTTGGTAGCTTCCTCAGCTAGTGAGAGTAATAACTCAGGTGCTGAAGATACCGTTAGTACTGAAAAGCCCAAAAAAAAGTCAGCTTACAGTTTGGCACCCAATCGTGTTCACTGCCCCTACTGTCAGCGTATGTTCCCTTGGTCCAGTTCATTGAGACGTCATATATTAACTCATACCGGTCAAAAACCATTCAAATGTTCCCATTGTCCACTTTTGTTTACCACCAAGAGCAATTGTGACCGTCATCTTTTGCGTAAACATGGCGATGTCGAATCGGCTGTATCCGTTTATGTACCCACCGAGGATGTTTCAGAACCCATACCTTTGCCAAAGTCCGTAGAAGAGATAGAGAGAATGCAGAGAGTGCGTGACGAGGAAGATCGTAAACGAAAGGCTGAAGAGCAACGGGAACGTTTGGAGAAAGAGCAAAAAGAGAAACAGAAGTTAGAGCAAGAACAGCAACAAAAACAAGCTTTCCTTAAACAATTAGCAGCCGCTCAATTCCAACAACAACAATTCAATCAAAAACCTGAAGTAAATTCGTTGTCATCATCTGAATTACCATTTAAGTGCCATTTATGTGAGAGCTCGTTTGCTGAACGTATGCAGTGTTTGGATCACATCAAATGTTTACATGCCCAAGAGTTTGCTCTGCTGCTGTCGAAAGGAGCCATTGAAAGTGAAGCAGATTTAGCGCTCATGAATTCAAACGAAGAGGAAGAACGCCACCGATCAACAGAAGAAGGGAGCAAGGGAGGAAAATATCCTGATTATAGCAACCGAAAAGTTATCTGTGCCTTCTGCATGAGACGTTTCTGGTCCACGGAAGACTTGAGAAGACACATGCGCACTCATTCTGGCGAAAGACCATTCCAATGTGAGATTTGCCTAAGAAAATTCACCTTAAAGCACAGCATGTTAAGACATATGAAAAAGCATAATGGTATCCATGTAAATGGTGGCCAATTAGGAGCCGATAATTTGGTAAATGGCAATTCTGGCTCTGATTATTCAGATGATGAACAAACTCCCAACTCTATACCGACGCCACCCATGCCATTACCAAGTAGCAGCATTAATGCTTTATTTATGGGTTCCAAATTCCAAGAACTAATCAAACAGGCCAATGAATGGAGAAATGGTAACTTAGGAGTGTTAAGAGAACGTAAGGAGAATAACTCAGAGGATGCAAATACACCACAATCTGATTTAATTGGTAATTTACTGGGTATCAGTGATCAGGGTATTCTAAATAAATTAATGTCATCACCTGATGAAGCTGCCAAGTTATTGGGAGTGGATAAGTAA
Protein Sequence
MLATTNAITATAPATPIKMERRDSNSSESSLEHLDLGRAAKKLNAITSTPLVTSDATVACSKNSIANATMLASHRADLEREHLSLQHRMQESDETNDYDEDDSADEKSVQPRQQLQHKRRLSGRSLLDKTTSVQLEYNADNPNSLRKKFRFNRNLVDYSNESGFIDASNASQLMNSATSLTATTTENQTVQLSSKSNSCSDSSSPPQSNGNSSPESATGEREDMKYMCPICEVVSPTAHQFTNHIRCHNYASGHTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQHTHHRRNSNGTKFNSSNNNNNNNSSNNNNNNNSSNNGGNNSTTTAALATAAVNKHTSATTLTNGQLSEGLKLSTVATVLTTAVEAVAGSTAKNSSSDNDNSQKAAAAIMNKTTTAGANGKRLNNGNADIESYESDGGCSSDSSTGHNNKHINNNNNNNNNNNNNNFNAHNNNNNDMKINNNNYKRKHTDYDDDLNHHRDIEDAGDENHDLLRHRLKANSNIVSRSEHVAENKTNDSLVCPVCNESDFLDVLGLDQHMDGKHPEIPAKCKDCDVIFRTHHQLNIHPCSADVKCQYEGDHQSGHNFSMKNSHYSESSAQHNNDDDDDEAHEASEEQMRQRQELIKHLQNAMAHTSSPASHHNQDLTEDDIKSEPSAHDSKDLADIQSILNMTSSSSTSNFLKNFEQSVNTPSSQYSYDRDEEEAQDAFTSEFRKMKLRGEFPCKLCPAVYPNLRALKGHNRVHLSEVGPAGPFRCNMCPYSICDKAALIRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTSREEVKRAIIYHPSEDSSCDDPSKKLQMFSSPEMEDECDIMSYQHQPKDRSTPVSHLKEMLTSGDSPSSKPVKIQVKSLDDLLDKSSASSGYHDSYDKRNIDTSEAPIDMSMDVLDLSKKPSMPITTPTVPVEKVVVPPVVPLPLPLALTVPKLDDKISSDILNNKVIPSVPTHTDPKLDVTSLEKQQQQFLLAQQQQLLNDPTQFFQQLYRNLLFPPFNPFLMPNSFMPSNLADFQKFAPLLSSMMGGAARTPLPNPQEIEKPSPLPTQIAHPKTSNLAPISPMMSEKSSSASLASMSSPKSLLSPNPNHLNISRHMVAPTTSTQQSTHMPSSMLSNGPVKMVLKNGVFMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRGASNAANMNGITHLQASAAQSHYGSTPPSMSSHSPISDQVKCAILAQQLKARKDTDLLQQALAYGSNSVVNPNMFANHVQNLSNGQTPFAYNQHHHHHHHLNQSGTPNGSMEDDEPKLIIDEDDDEGEEEDDEDIEEIPDDDQEEDEYHDVTLSERQDKPEDHQLPTTVEEVKLKADEPQESAKKVAESILEQAIKAGQNMSPFATKTTESTPAVSSTNNTMKSMIAQAPAVGKFLKEVASSPFKDESQDLVSVSELVDNATSNAVSFNSYFRPSDVANHMEPSDEDGLVASSASESNNSGAEDTVSTEKPKKKSAYSLAPNRVHCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGDVESAVSVYVPTEDVSEPIPLPKSVEEIERMQRVRDEEDRKRKAEEQRERLEKEQKEKQKLEQEQQQKQAFLKQLAAAQFQQQQFNQKPEVNSLSSSELPFKCHLCESSFAERMQCLDHIKCLHAQEFALLLSKGAIESEADLALMNSNEEEERHRSTEEGSKGGKYPDYSNRKVICAFCMRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHNGIHVNGGQLGADNLVNGNSGSDYSDDEQTPNSIPTPPMPLPSSSINALFMGSKFQELIKQANEWRNGNLGVLRERKENNSEDANTPQSDLIGNLLGISDQGILNKLMSSPDEAAKLLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00893180;
90% Identity
-
80% Identity
-