Basic Information

Insect: Cordilura impudica
Gene Symbol: -
Assembly: GCA_963682025.1
Location: OY821521.1:73884583-73886767[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00019 0.059 16.6 4.2 1 23 336 358 336 358 0.99

2 8 3.5e-06 0.0011 22.0 0.7 1 23 366 388 366 388 0.98

3 8 4.8e-05 0.015 18.4 0.1 1 23 396 419 396 419 0.96

4 8 0.00022 0.066 16.4 0.1 3 23 427 447 426 447 0.96

5 8 0.0018 0.56 13.5 0.3 2 23 456 478 455 478 0.96

6 8 0.36 1.1e+02 6.2 2.2 1 23 486 509 486 509 0.91

7 8 4.8e-06 0.0015 21.6 1.7 1 23 515 537 515 537 0.98

8 8 0.00032 0.099 15.8 3.3 1 23 543 566 543 566 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00019	0.059	16.6	4.2	1	23	336	358	336	358	0.99
2	8	3.5e-06	0.0011	22.0	0.7	1	23	366	388	366	388	0.98
3	8	4.8e-05	0.015	18.4	0.1	1	23	396	419	396	419	0.96
4	8	0.00022	0.066	16.4	0.1	3	23	427	447	426	447	0.96
5	8	0.0018	0.56	13.5	0.3	2	23	456	478	455	478	0.96
6	8	0.36	1.1e+02	6.2	2.2	1	23	486	509	486	509	0.91
7	8	4.8e-06	0.0015	21.6	1.7	1	23	515	537	515	537	0.98
8	8	0.00032	0.099	15.8	3.3	1	23	543	566	543	566	0.98

Sequence Information

Coding Sequence: ATGGAAGGTTGCCTATTATGTTTAGAGATTAACAAAGCAGTCTGTATTACAGGAAATTCATCGCAATGGCAAGAATTAGATATAAAGAATATTGTAGAGAAACATTTTTGGGCCATGCATACTATACAATCATCATCTTGGCTTTGCAATACATGCTGGCAAGAATTACATGATTTCCACAAATTCTATATTCGCATAGAAGAATCTCATATGAATTTTGGGAAACTAATAAAGACGGAAAATGAACCAGCTTTGCAAGATCCAATTGAAAACGTACTTGATGAAAAAAAAGTACTTAGAGACGTTTTATATGAATCTCAACTAGAACCAGAGATTTCAATGCATGCATCCCTTCCAAATGAATTAATAATTGAAGAACAACAGCCTATTAAGCAAGAACCAGATGAAGGActcgatgatgatgataatgatgatgatgataagcCTTTAAAACCAAAACGTAAACGAAAACGGCGTGATAAAGATTCTACAAAGGAAATGGAAGTGGCTGAAGAGGATCCCTTAAACAAGCCTAAAAATTCAAAACATAAAACAATTGAGTCTAAAATTAAACGAAACCGTAGAACTATTAAAAAATCAATCATGACAACAGTACAATTAGAAACAGAAAAATCCAATCCCATTAAACATGATTCGCCCTATATTTCCGAAGAATGGAAAGACTTACTTGGATCGCCTATTGCAAATGATTCTGACACTGATTCCAACTATGATTTTGACAAAGATTCTTTGGAAAATAACGAAATAAATAGAAATCTTAATTCCCAAGCAATTTCAGACGAGAAAGATAAATTAATTgctgaaaactttaaaattatctGCATTCTTTGTCAAATTCCAATGGAGAATTTTCATCTTTTACGGAAACATTTCAAAATGGAACATAAACACATCAAGAAAGGCTATGTGATATGTtgcaataagaaaatattttcgcGGTGTGCGCTTTTTGATCATGTGAACCATCATTTGGATCCAAATTATTTCAAATGTCAACAATGCGATAAAGTTTTCAAAGATCGCCTATGTTTGACGGGACACCTAAAAAGACATGAAGGTAATACTGAAAAGAAATTCTCTTGTGATATATGCGATAAAAGTTTTAGTATTCCGTCACTCTTGAAATATCATAAAATGACACATTTACCTGAGGAGGAAAAACAGTTTCCATGTTCAGAATGTGGGAAAAGATTTGGTACGGAGTTGTCTCTTACTAATCATGTACGTGctgttcatttaaataaatatgcaaaaatctgtgaaatatgtGGAAAATCATTAAGTTCTGCTGATGTATTCGAGCGCCATATGCTAGAGCACGAAGGTAAAACAGCACCTACCATAAGTTGTGACATCTGTGGATTATTATTGACCAGTAAGAAAGGTTTGAAACGACACAAGAATACGATACACCCAATTGGGGGTCATCAGGAGTACACCTGTTCTATATGCTCGAAAATATCATCAAATCGACAGGCACATGAAAGACACGTAAAATTTTCACATGAAATGGCTTATAATCACAAATGTACAATGTGCGAAAAAGCTTTTAAGAAACCACGAGCATTAAAGGAACATATGGCTACACATACTGGCGATGTCTTATATACTTGTCAATGGTGTGCGAAGACATTTAATTCAAGTGCCAATTTTCATAGCCATCGAAAAAAAGCACATCCCATTGAATGGGAAGAGGCAAATCGAAAAAAATATGCTGCCAATTTACCACCTAGTCTAAAAGCGCCCCCGTCAAATGATGTTAATAACTTACCAAGACCCATatacatgcatttaacaaaaaatggtgctactgaaaatattaaatag
Protein Sequence: MEGCLLCLEINKAVCITGNSSQWQELDIKNIVEKHFWAMHTIQSSSWLCNTCWQELHDFHKFYIRIEESHMNFGKLIKTENEPALQDPIENVLDEKKVLRDVLYESQLEPEISMHASLPNELIIEEQQPIKQEPDEGLDDDDNDDDDKPLKPKRKRKRRDKDSTKEMEVAEEDPLNKPKNSKHKTIESKIKRNRRTIKKSIMTTVQLETEKSNPIKHDSPYISEEWKDLLGSPIANDSDTDSNYDFDKDSLENNEINRNLNSQAISDEKDKLIAENFKIICILCQIPMENFHLLRKHFKMEHKHIKKGYVICCNKKIFSRCALFDHVNHHLDPNYFKCQQCDKVFKDRLCLTGHLKRHEGNTEKKFSCDICDKSFSIPSLLKYHKMTHLPEEEKQFPCSECGKRFGTELSLTNHVRAVHLNKYAKICEICGKSLSSADVFERHMLEHEGKTAPTISCDICGLLLTSKKGLKRHKNTIHPIGGHQEYTCSICSKISSNRQAHERHVKFSHEMAYNHKCTMCEKAFKKPRALKEHMATHTGDVLYTCQWCAKTFNSSANFHSHRKKAHPIEWEEANRKKYAANLPPSLKAPPSNDVNNLPRPIYMHLTKNGATENIK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -