Basic Information

Insect: Cordilura impudica
Gene Symbol: -
Assembly: GCA_963682025.1
Location: OY821520.1:74777879-74784173[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00042 0.13 15.5 0.6 1 23 281 303 281 303 0.97

2 15 0.0014 0.44 13.8 3.9 1 23 309 332 309 332 0.96

3 15 0.00042 0.13 15.5 0.9 1 23 541 563 541 563 0.98

4 15 2.9 8.9e+02 3.4 6.2 1 23 569 592 569 592 0.96

5 15 0.04 12 9.2 0.3 2 23 801 823 800 823 0.96

6 15 9.6 2.9e+03 1.8 0.2 6 23 832 849 832 849 0.96

7 15 0.00059 0.18 15.0 0.5 1 19 855 873 855 875 0.97

8 15 0.0055 1.7 12.0 6.2 1 23 886 909 886 909 0.93

9 15 0.038 12 9.3 0.8 1 23 915 938 915 938 0.91

10 15 0.015 4.7 10.6 0.5 2 23 941 962 940 963 0.94

11 15 0.033 10 9.5 0.9 2 23 1031 1053 1030 1053 0.96

12 15 0.0008 0.25 14.6 0.3 1 19 1085 1103 1085 1105 0.97

13 15 0.0056 1.7 11.9 4.2 1 23 1116 1139 1116 1139 0.93

14 15 0.059 18 8.7 1.0 1 23 1145 1168 1145 1168 0.89

15 15 0.017 5.3 10.4 0.1 2 23 1171 1192 1170 1192 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00042	0.13	15.5	0.6	1	23	281	303	281	303	0.97
2	15	0.0014	0.44	13.8	3.9	1	23	309	332	309	332	0.96
3	15	0.00042	0.13	15.5	0.9	1	23	541	563	541	563	0.98
4	15	2.9	8.9e+02	3.4	6.2	1	23	569	592	569	592	0.96
5	15	0.04	12	9.2	0.3	2	23	801	823	800	823	0.96
6	15	9.6	2.9e+03	1.8	0.2	6	23	832	849	832	849	0.96
7	15	0.00059	0.18	15.0	0.5	1	19	855	873	855	875	0.97
8	15	0.0055	1.7	12.0	6.2	1	23	886	909	886	909	0.93
9	15	0.038	12	9.3	0.8	1	23	915	938	915	938	0.91
10	15	0.015	4.7	10.6	0.5	2	23	941	962	940	963	0.94
11	15	0.033	10	9.5	0.9	2	23	1031	1053	1030	1053	0.96
12	15	0.0008	0.25	14.6	0.3	1	19	1085	1103	1085	1105	0.97
13	15	0.0056	1.7	11.9	4.2	1	23	1116	1139	1116	1139	0.93
14	15	0.059	18	8.7	1.0	1	23	1145	1168	1145	1168	0.89
15	15	0.017	5.3	10.4	0.1	2	23	1171	1192	1170	1192	0.96

Sequence Information

Coding Sequence: ATGGTATGCAGATTGTGTTTGCAAAACAGTTCTGAAGTActtgaaatatttaataacaaaggaCAAGAGTCAAAAATAGCTATGGTGATTGGTAAACATTTTTGGTTCGAGCCAAAAATTGAGGATCCCGTCTCGTCACACATATGCAACTGTTGTTGGACAAAGCTATCTGACTTCCACGAATTTTACAAATATGTCGAAAAGGCGCAGCAACTTTTGACAGTAGAAGTTATAGTTAAAACCGAGTACAAATTAACAGCTTGTGATATAGCAGTTGAGGACGTAGAATTAGCAAGTAAATATGTACTTAAGGAAAATATAGAAGAGCAATATGAAGAGCCGTTTAATATAACATCCGATGTGTTAGCAGAGGACAGTTGTGGCGTAATAGAATTTGAGTTTCCCACTGATTTGAAAGACCAAATTATTGATTTTGTAAATAATGAGAAAAAGAAAGATAATCAAGATATATACGCAATTCATGATCACAAAGAAGATGAAAGCAATGTGCAGTTCCAAATTaatgataaaaagaaaattttaagaaaaaaaggcaCGAAACTTAAAAAGTCCTCTAAACGGAATAAAATAGAATCTCTTACCGAAGAAGCAAAAACAACATACAAAGGACGTGGACGTCCACATAAAGGTGAACTGGCTCATTTGAAAAGTAAATCCAATTGTAATGAAGAAAAAGCTGCAACACTCAGAACTTACAATGATGATATTGTAAATAAAGAGAAAAAGAAAGATGAACAATCAGAAGTTTGTCAAAAAACCAACGCTTTTCGTGGTGTATTATACAGCCTTAAACATCATGTTCAACAATCTGATGGCAAATACGTATGTAATATATGCAAGAAATCTTATAAAATGGCAAAATCAATTAAAGAACATATGTTAGAACACACGGGACTCTCTTTGTACAGTTGTCCCCACTGCAGTCGTACGTTTAACTACATCAGCGCTATGAATAAACATCGTAAACAGAAGCATATAAAGGAATTTGAAGAATTTCGAAAGCTAAGAAAAATAAGCGCTCGCAGCAAGGAGCCTATAATATTAACAATATCATCTTTATCAGATGATACAAAGAACTCTTTTGAATTACCAAGTGAACATGATCTTGAGAAAAATATAGAGGAACAATATGAAGAGCCGTATAATATAACATCTAATGCGTTAGCAGATGATTTCAAAGACCAATCTATTGATATTGTAAATAATGACAAGAAAGATGATCAAGATATATCTACAATATATGATGAGAAAGTAAATGAACGCGATTTGCAGTTCCTAATTaatgataaaaagaaaattttgagaaaaaaaagcaCGAAACTCAAAAAGTCCTCTAAACGGAATAAAATAGAATCTCTTACCgaagaagcaacaacaacatacatAAAACGTGGACGTCCACGTAAAGGTGAAATGGCTCATTTGAAAAGTAAATCCAattgtaataaagaaaaaaatgcaaaactcAGAACTTACAATGATGATATTGTAAATAAAGAGAAAAAGAAAGATGAACAATCAGAAGTTTGTCAAAAAACCAACGCTTTTCGTGGGGTATTATACAGCCATAAACATCATGTTCAACAATCTGATGGCAAATACGTATGTAATATTTGCAAGAAGTCTTATAAAATGGCAAAATCAATAAAAGAACATATGTTACAACACACGAGACTCTCTTTATACCGTTGTCCCCACTGCATTCGTACGTTCAACTGCATCAGCAATATGCAAAAACATCGTAAAGAGAAGCATCCAAAGGAATTTGAAgaatttcgaaaaataataaaaataagttctcAGAGGAAAGAGATTATAATACCAACAATATCATCTTTATCAGATGCTACAATGAACTATGGTGAAGTATCAAGTAAACATAAccttggggaaaatatgaatcaACAATATGAAGAGCCGTTTAATAGAACATCCGATGTGTTAGCAGAGGACAATTATTGTGTAATAGAAAATGCTTTTCCGCCTGATTTGAAAAACCAATCTATTGATATTGTAAATAATGAGGAAAAGAAAGATGATCAAGATATATATGCAATTCATGGTCACAAAGAAGATGAAATCAATGTGCAGTTCcaaataaatgataaaaagaaaattttgagaaaaaaagtcACGAAAATCAAAAAGTCCTCTAAACGGAATAAGAGATTCTATTCTCTTACCgaagaagcaacaacaacatacaaaGGACGTGGACGTCCACGTAAAGGTGAAGTGGTTCATTTGAAAAGTAAATCCAATTGTAATAAAGAAAAAGCTGCAAAACTCAGAACTTACAATGATGAATGTAGATTTATTGTTACGACACAGGAAATGCCAGAAATTATCAACCGTAAAATTTCTGAATATATGCAATTGAAATGTGATGTTTGTGGGACCGAGTTGGATACTTTTCGTTATATAAGAAATCATATGAGGTTGGTTCATGATATCCGCCCATATGTCAAATGTTGTGAAAAGAAGCTTTACTCGCGTGCGTTGTTATATGATCATATAAAGTTTCATTTAAACCCCGATATATATAAATGTAAAAAATGTGGTAGAGTTTTTTGGAACAAACGTAATTTAACAGTTCATAATATATGCGTGCATCAGCCTGAAGatgctaaaatatttaaatgtcagCAGTGTCCCAAAAAatttgctacaaaatattttctacatAAACATAAAACTCAACAGCATTATAAAGTATTGAAACATTTTTGTCCAGAATGTAAAAGAGGATATCCTTATAAGTCCGCTTTAACGTTTCACATGGCTTGGAGTCATGGAACAATGTGTGATATCTGCTCGGAAATAGTTAAAGGGCCAGACGCATTTAAACGACATCAGTTAAAACATCATGGTATTGTTGAACCAACAACATCAAACAAAGTACGTTTACGACCACGTATAGGTGATGTGGctcctttgaaaaataaatccaattctaatgaaaaaaaatctgcaaaactcaGAATTTACCGTGGTCCAAGTAGATCTAATGTTGCGACACAGGAAATGCCAGAAATTATTAACCGTAAAATTTCTGAATATATGCAACTGAAATGTGATGTTTGTGGGACCGAGTTGGATACTTTTTGTAATATAAGAAATCATATGAGGTTGGTTCATGATACCCGCCCATATGTCAAATGTTGTGAAAAGAAACTTTTCTCGCGTGCGTTGTTATATGATCATATAAAGTTTCATTTAAACCCCGATATATATAAATGTGAAAAATGTGGTAGAGTTTTTTGGAACAAACGTAATTTAACAGTTCATAATATATGTGTGCATCAGCCTGAAGatgctaaaatatttaaatgtcagCGGTGTCCccaaaaatttgttacaaaatattttctacaGAAACATAAAACTCAACAGCATTATAAAGTACTGAAACATTTTTGTCCAGAATGTAAAAGAGGATATCCTTATAAGTCCTCTTTAACGTTTCACATAGCTTGGAGTCATGGAACAATGTGTGATATCTGTTCGGAAATAGTTAAAGGGCCAGACGCATTTAAACGACATCAGTTAAAACATCAAGATATTGTTGAACCAACGACAATATACAAAGGACGCGGACGTCCACGTATAGGTGATGTGGCTCCTTTGAAAAATAATCAACAATCTGAAGGCAAATACGAAGGTAATGCAACAAatctttaa
Protein Sequence: MVCRLCLQNSSEVLEIFNNKGQESKIAMVIGKHFWFEPKIEDPVSSHICNCCWTKLSDFHEFYKYVEKAQQLLTVEVIVKTEYKLTACDIAVEDVELASKYVLKENIEEQYEEPFNITSDVLAEDSCGVIEFEFPTDLKDQIIDFVNNEKKKDNQDIYAIHDHKEDESNVQFQINDKKKILRKKGTKLKKSSKRNKIESLTEEAKTTYKGRGRPHKGELAHLKSKSNCNEEKAATLRTYNDDIVNKEKKKDEQSEVCQKTNAFRGVLYSLKHHVQQSDGKYVCNICKKSYKMAKSIKEHMLEHTGLSLYSCPHCSRTFNYISAMNKHRKQKHIKEFEEFRKLRKISARSKEPIILTISSLSDDTKNSFELPSEHDLEKNIEEQYEEPYNITSNALADDFKDQSIDIVNNDKKDDQDISTIYDEKVNERDLQFLINDKKKILRKKSTKLKKSSKRNKIESLTEEATTTYIKRGRPRKGEMAHLKSKSNCNKEKNAKLRTYNDDIVNKEKKKDEQSEVCQKTNAFRGVLYSHKHHVQQSDGKYVCNICKKSYKMAKSIKEHMLQHTRLSLYRCPHCIRTFNCISNMQKHRKEKHPKEFEEFRKIIKISSQRKEIIIPTISSLSDATMNYGEVSSKHNLGENMNQQYEEPFNRTSDVLAEDNYCVIENAFPPDLKNQSIDIVNNEEKKDDQDIYAIHGHKEDEINVQFQINDKKKILRKKVTKIKKSSKRNKRFYSLTEEATTTYKGRGRPRKGEVVHLKSKSNCNKEKAAKLRTYNDECRFIVTTQEMPEIINRKISEYMQLKCDVCGTELDTFRYIRNHMRLVHDIRPYVKCCEKKLYSRALLYDHIKFHLNPDIYKCKKCGRVFWNKRNLTVHNICVHQPEDAKIFKCQQCPKKFATKYFLHKHKTQQHYKVLKHFCPECKRGYPYKSALTFHMAWSHGTMCDICSEIVKGPDAFKRHQLKHHGIVEPTTSNKVRLRPRIGDVAPLKNKSNSNEKKSAKLRIYRGPSRSNVATQEMPEIINRKISEYMQLKCDVCGTELDTFCNIRNHMRLVHDTRPYVKCCEKKLFSRALLYDHIKFHLNPDIYKCEKCGRVFWNKRNLTVHNICVHQPEDAKIFKCQRCPQKFVTKYFLQKHKTQQHYKVLKHFCPECKRGYPYKSSLTFHIAWSHGTMCDICSEIVKGPDAFKRHQLKHQDIVEPTTIYKGRGRPRIGDVAPLKNNQQSEGKYEGNATNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -