Basic Information

Insect: Cordilura impudica
Gene Symbol: grau
Assembly: GCA_963682025.1
Location: OY821521.1:56082637-56084588[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00031 0.094 15.9 2.2 1 23 327 350 327 350 0.97

2 8 7.4e-06 0.0023 21.0 3.4 1 23 360 382 360 382 0.97

3 8 4e-05 0.012 18.7 0.0 1 23 390 413 390 413 0.94

4 8 7.7e-05 0.024 17.8 0.4 3 23 421 441 420 441 0.97

5 8 0.035 11 9.4 0.3 2 22 450 470 449 472 0.88

6 8 0.00014 0.044 17.0 0.4 1 23 480 503 480 503 0.96

7 8 3.9e-06 0.0012 21.9 0.9 1 23 509 531 509 531 0.96

8 8 6.9e-06 0.0021 21.1 3.4 1 23 537 560 537 560 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00031	0.094	15.9	2.2	1	23	327	350	327	350	0.97
2	8	7.4e-06	0.0023	21.0	3.4	1	23	360	382	360	382	0.97
3	8	4e-05	0.012	18.7	0.0	1	23	390	413	390	413	0.94
4	8	7.7e-05	0.024	17.8	0.4	3	23	421	441	420	441	0.97
5	8	0.035	11	9.4	0.3	2	22	450	470	449	472	0.88
6	8	0.00014	0.044	17.0	0.4	1	23	480	503	480	503	0.96
7	8	3.9e-06	0.0012	21.9	0.9	1	23	509	531	509	531	0.96
8	8	6.9e-06	0.0021	21.1	3.4	1	23	537	560	537	560	0.98

Sequence Information

Coding Sequence: atggaaggtTGTTTATTATGTcttcaaataaatgaaaaatttgtgaGGTGCATTAAAGTCAAATCCTCCCAATGGGAAAAACTAGATGTAGGGAAATTGATAGAGAAACATTTTTGGCCACTGGAAACTTTACAATCTTATTTATGGCTTTGTACTTCTTGTTGGCAAGAACTAtatgaatttcacaaattttacaaACGCATAGAGGAGGCTCATGCAGATTTTGGAAAACTTATTAAAACGGAAGACGATTGTCAACCTCTAGAACAGaagcaaaatttattaaatggagCGGATTATAATACATCTTTGCATAAGGACAACTTAGTAGATTGCTATATGGAACCCGAAATATTAATAGATCAACCTATACAGGAATCAGTAATAATCGATGAAGAGAAACTTAATATTAAGGAAGAACCCCAGGAAGAACTTGATACAGATGATATGATTTTAAATCATAGAAGTATACGAAAAAGTTCTGGGCACTTAAACAATGAAGATCCTTTAAAAAACCctaaaaaaaccaaattatttaaaatcgcaaaatcaaaaaaGTCAACACCATCAACAGAAACAATACTAAATGACTTAGCTTCAGATAAAATACTAATTAAACAAGATCcagatttattaaatataaatatagaacccAAACTTACTCTTAGTTGTGCCAATGACGATTCTGATACAGACTCTAGCTATGAACCAGATAAAGACACCACGGATAATAAATCGGCAAAAAAATCTTATAACAAATACCGTACGCATCGTGAAGAAAATGACAAATTTATAGCTGAAAACTTCAAAGGAATGTTTTGCAATCTTTGTTTATTACCAATGGAAAATTTTCGTGTTCTTCATAAACATTTCGCAGAAGAACATAAACAGAAAGGTTACGTTATATGTTGTACACGGAAATACTATGGACGTAGTCTTCTTGTCGATCATTTACATTGTCACTTAAATCCTGACCATTTTAAATGTAATCAATGTGATAAAGTTTTGTCTGACCGCATCCGTTTAGAAACCCACATGAAACACATGCATGGCGAGGGTGATGAACTTGGTAAAAAACATGTTTGTAATGTATGTGGCAAATCATTTGCTCAGGCCCACAAATTGAAAAGTCATAAGTTGACGCATTTATCACAGGAGGAGAAGATGTTTCCCTGTACGGAGTGTGGGAAATCTTATGGCAGTGCTACCAAATTAAAATGGCATATAATTGCCGTACATaccaaaaaattctataaaatctgCTTTATATGCGGAAAATCTATTAGTTCCAATAGTGAATTTAAAATCCACATGGATAAACATGAAGGCAAACCAGCACCCTTATTAAATTGTGATGTTTGCGGTCTTCGGCTAACAAGTGCTGGCGGCTTAAGGCACCATAAATATGCCCAACACCCGGAGGGAGGAAAAAAAGACCACAGCTGTCCCATATGTCCGAAAATCTCACCTACTCTAAGGGCTCTAAAAAAGCATATAACCACTATGCACGAAAGGGGTTATGATCACAAATGCACAATATGCGAAAAAGCATTTAAGAGAGCAGAAGCATTAAAAGAACACATGGCTTTTCATACCGGCACACCAGTGTATACTTGTCCTTACTGTCCTAAAACGTTTAACTCAAATGGTAATATGCACTCTCATCGTAAAAAAATGCATCCTACTGAATGGAATGaggcaaaactaaaaaaatattctggAAAGTTACCATGCCAGTACAATTCCTCTTCCATTACAAACGAAACAATAAGTATGATCTAA
Protein Sequence: MEGCLLCLQINEKFVRCIKVKSSQWEKLDVGKLIEKHFWPLETLQSYLWLCTSCWQELYEFHKFYKRIEEAHADFGKLIKTEDDCQPLEQKQNLLNGADYNTSLHKDNLVDCYMEPEILIDQPIQESVIIDEEKLNIKEEPQEELDTDDMILNHRSIRKSSGHLNNEDPLKNPKKTKLFKIAKSKKSTPSTETILNDLASDKILIKQDPDLLNINIEPKLTLSCANDDSDTDSSYEPDKDTTDNKSAKKSYNKYRTHREENDKFIAENFKGMFCNLCLLPMENFRVLHKHFAEEHKQKGYVICCTRKYYGRSLLVDHLHCHLNPDHFKCNQCDKVLSDRIRLETHMKHMHGEGDELGKKHVCNVCGKSFAQAHKLKSHKLTHLSQEEKMFPCTECGKSYGSATKLKWHIIAVHTKKFYKICFICGKSISSNSEFKIHMDKHEGKPAPLLNCDVCGLRLTSAGGLRHHKYAQHPEGGKKDHSCPICPKISPTLRALKKHITTMHERGYDHKCTICEKAFKRAEALKEHMAFHTGTPVYTCPYCPKTFNSNGNMHSHRKKMHPTEWNEAKLKKYSGKLPCQYNSSSITNETISMI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00371679;
90% Identity: iTF_00371508; iTF_00371524; iTF_00371566; iTF_00371510;
80% Identity: -