Basic Information

Insect: Cordilura impudica
Gene Symbol: Znf574
Assembly: GCA_963682025.1
Location: OY821521.1:51316369-51332800[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.9e-05 0.0057 19.7 2.1 2 23 28 50 27 50 0.94

2 14 0.0011 0.35 14.1 0.5 2 23 62 84 61 84 0.96

3 14 0.04 12 9.2 2.2 1 22 91 112 91 114 0.89

4 14 7.1e-06 0.0022 21.0 1.0 1 23 120 142 120 142 0.98

5 14 9.8e-05 0.03 17.5 3.2 1 23 148 171 148 171 0.98

6 14 0.00085 0.26 14.5 1.0 2 23 202 224 202 224 0.94

7 14 0.0009 0.28 14.4 1.5 1 23 231 253 231 253 0.98

8 14 0.025 7.7 9.9 5.1 1 23 259 282 259 282 0.98

9 14 0.086 26 8.2 0.1 9 23 293 307 291 307 0.91

10 14 0.0013 0.39 14.0 5.8 1 23 313 336 312 336 0.95

11 14 0.036 11 9.4 0.4 2 23 348 370 347 370 0.95

12 14 0.0033 1 12.7 3.2 1 23 377 400 377 400 0.93

13 14 5e-06 0.0015 21.5 1.8 1 23 407 429 407 429 0.98

14 14 0.0065 2 11.7 7.1 1 23 435 458 435 458 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.9e-05	0.0057	19.7	2.1	2	23	28	50	27	50	0.94
2	14	0.0011	0.35	14.1	0.5	2	23	62	84	61	84	0.96
3	14	0.04	12	9.2	2.2	1	22	91	112	91	114	0.89
4	14	7.1e-06	0.0022	21.0	1.0	1	23	120	142	120	142	0.98
5	14	9.8e-05	0.03	17.5	3.2	1	23	148	171	148	171	0.98
6	14	0.00085	0.26	14.5	1.0	2	23	202	224	202	224	0.94
7	14	0.0009	0.28	14.4	1.5	1	23	231	253	231	253	0.98
8	14	0.025	7.7	9.9	5.1	1	23	259	282	259	282	0.98
9	14	0.086	26	8.2	0.1	9	23	293	307	291	307	0.91
10	14	0.0013	0.39	14.0	5.8	1	23	313	336	312	336	0.95
11	14	0.036	11	9.4	0.4	2	23	348	370	347	370	0.95
12	14	0.0033	1	12.7	3.2	1	23	377	400	377	400	0.93
13	14	5e-06	0.0015	21.5	1.8	1	23	407	429	407	429	0.98
14	14	0.0065	2	11.7	7.1	1	23	435	458	435	458	0.98

Sequence Information

Coding Sequence: ATGGCAGATGAGGTCTTGGGatTTCCCTCGAAACGTAAACTTAAGTCCCATGAACACGTTCACCTCGATGGCTACAATTGTGTATGCGATATATGCGGtaacacatttaaaaataaatttacccTTAAGAAACACATTGAAATTCAACATGCGGAGGGTCCTCGTCTGGATAAAGAGCCACAAGAATGTCCGATATGTTTGAAAGTGTTAAGAGGCCATAAAGGTTTGAAGGCCCATATGAGAAATTTACATGTTGCCTCGGAACATGAGCATCGCTGTAAGATTTGCAATCATATTTCGACAACGGCCAAAGGTCTACGAGTCCACGAGATATTTAGGCATGAAAAGGAGAGAAAACATAAATGTTATCTGTGCGATAAGGCATTCAAAAGGCCTTTGGATTTAAGaGAGCATATTGCTACTCATACCGGAGAATCCTTGTACAAATGTGCCGAGTGTGCTGCCACTTTCAAATCAAATTCAAACTATTATCATCATATAAGACGTTTTCATAAGGAAAAACCCAAAAAAGAGTTAATGATTAAAATAGCATGTTTGCAGCAACATGTTAAACATTTGCATACAAATACGGATGTTGAAAATCGTTGCGAAACCTGTGGTCATGTCTCGACCACGGCTAAAGCTCTCAAAAAACATATAGCCAATCAACATGACGAACATAAATACAAACATAAATGTAATTTAtgtgaaaaacaatttaaaacgctACAGGGTATAAGGgaaCACATTGCCACTCATACGGGAGAAGCTTTGTACAAGTGCAACGTTTGTGCTATGCCCTTCAAGTGTCGCGCCAATCTATTTCATCATCGCCGGCGTTTACATAAAGCTGAAGTAGCTCTTGAAAAGCAAATAAAatatcCAACTCAAACTACTTTGAATGCCCATATGAAAACACATAATTCTGAGAAATGTCATATCTGCGATCAGTGTGGTCTATCATTTAGAAGAAATGACCGCCTACAATATCACATTAAGCACGATCATGCTAAACAACCAAAAATACCACAAACTCCTCAGCAATGTGGAATTTGTAATAACTGGTATTCTGGTAAATacactttaaatcgtcatataaaatatttacatacgAATACCGATGTTGAACATCGTTGCACGACCTGTGGTCATGTATCGACCACGTCGAAAGCTTTAAGAATGCATATATTATTTAATCACGATGAacgtaaatataaacataaatgtaGTGTATGTGGGAAGGAATTCAAAAGACTTCAAAATATAAGGGAACATATGGCCACTCATACTGGAGAGAATTTGTACAAGTGTGACTTTTGTGGCACAACATTTAAGTGTAAAGCGAATTTATATCATCATCGTAATCGTTTGCACAAAGCTGAAAAGGCTGCGgagaataaaaaaactaaattttcaaagaaaagaaattaa
Protein Sequence: MADEVLGFPSKRKLKSHEHVHLDGYNCVCDICGNTFKNKFTLKKHIEIQHAEGPRLDKEPQECPICLKVLRGHKGLKAHMRNLHVASEHEHRCKICNHISTTAKGLRVHEIFRHEKERKHKCYLCDKAFKRPLDLREHIATHTGESLYKCAECAATFKSNSNYYHHIRRFHKEKPKKELMIKIACLQQHVKHLHTNTDVENRCETCGHVSTTAKALKKHIANQHDEHKYKHKCNLCEKQFKTLQGIREHIATHTGEALYKCNVCAMPFKCRANLFHHRRRLHKAEVALEKQIKYPTQTTLNAHMKTHNSEKCHICDQCGLSFRRNDRLQYHIKHDHAKQPKIPQTPQQCGICNNWYSGKYTLNRHIKYLHTNTDVEHRCTTCGHVSTTSKALRMHILFNHDERKYKHKCSVCGKEFKRLQNIREHMATHTGENLYKCDFCGTTFKCKANLYHHRNRLHKAEKAAENKKTKFSKKRN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -