Basic Information

Insect: Cordilura impudica
Gene Symbol: ZNF275
Assembly: GCA_963682025.1
Location: OY821520.1:235500661-235508403[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00085 0.26 14.5 1.2 2 23 197 218 196 218 0.96

2 11 2.8e-06 0.00087 22.3 0.1 1 23 318 340 318 340 0.95

3 11 0.0014 0.44 13.8 2.1 1 23 346 368 346 368 0.95

4 11 2.8e-05 0.0087 19.2 0.7 1 23 380 402 380 402 0.98

5 11 0.0039 1.2 12.4 0.6 1 23 411 434 411 434 0.95

6 11 0.0034 1 12.6 3.9 1 23 440 462 440 462 0.98

7 11 2.3e-05 0.007 19.5 0.2 2 23 469 490 468 490 0.97

8 11 1e-07 3.1e-05 26.9 2.3 1 23 496 518 496 518 0.96

9 11 0.0061 1.9 11.8 3.5 1 23 524 546 524 546 0.98

10 11 0.00012 0.036 17.2 0.5 1 23 552 574 552 574 0.96

11 11 9.3e-06 0.0029 20.7 3.8 1 23 580 602 580 602 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00085	0.26	14.5	1.2	2	23	197	218	196	218	0.96
2	11	2.8e-06	0.00087	22.3	0.1	1	23	318	340	318	340	0.95
3	11	0.0014	0.44	13.8	2.1	1	23	346	368	346	368	0.95
4	11	2.8e-05	0.0087	19.2	0.7	1	23	380	402	380	402	0.98
5	11	0.0039	1.2	12.4	0.6	1	23	411	434	411	434	0.95
6	11	0.0034	1	12.6	3.9	1	23	440	462	440	462	0.98
7	11	2.3e-05	0.007	19.5	0.2	2	23	469	490	468	490	0.97
8	11	1e-07	3.1e-05	26.9	2.3	1	23	496	518	496	518	0.96
9	11	0.0061	1.9	11.8	3.5	1	23	524	546	524	546	0.98
10	11	0.00012	0.036	17.2	0.5	1	23	552	574	552	574	0.96
11	11	9.3e-06	0.0029	20.7	3.8	1	23	580	602	580	602	0.99

Sequence Information

Coding Sequence: ATGTCTTGTGATCTATTAACGAAGTGTCGCACTTGTTTATGCGAGTCACACATATTTCACAAAATATATGATTGTGTGGATGAGAATTATAAGATTCTGGAAATGTTGAATGGTATAGTTCCTCAGATTGATATTAAGATTTCATCGAACTATTCCAGTCTGGTGTGTCAATCGTGTGTGGATAAACTAGTGGCCAGTTATAAATTTCAACAATTGTGCATAGAAACCAACAAACGTCTTAATGATTTAATGGGCTTTTCCATCTTTGAGACTGCATCTTTGACAGGAGAATCTAGttttaaaatggaaatagaaGTTGAAGATGATGCTCGTTTTGAATGCGGAAAAAATCCCAAAGAATTGGAGGAATCATCTGACAACGTTAGTGATTGGGTACCGGATCATAATACGGATAACGATACTGATTCCAGGTACATTATGaaAACCTTTAAAGCCCATTTATTAACGCATGACAATGAAGATATAACTCAATCGAATATTGAAGTTAACAATAAAAGAAGAGATGAGattaatattgatattaatgaacagaattattgtaaagataaTGATATTGTCAAGGACACACAGTGTTCCGATTGTCCCAAATGTTTTGAGAAGGAAGCTTTTTTATCGGCTCACTATGATATGCATGcgaagaaaacgaaaaataaatgcaATAAAGACACAAAGAATGAAGATGGCGTCGATGAAGCGGATGTGGAAAAGCTCAAGagcttgaaaaatgaaaatgaaactgaGTTGGATATTGAGAAAGTATCTAAagttaatataaaagaaaaaatagaagcgATCGAAGATCGCATGGATGAtGATAATTCCGAAAAAAATGCGTTTAATAAACCTGGAGCCAAACATatcaaaaataaagatttcattgATACGGGCATACGAGAAATTGAAAAACCCAGCAATAGAAGAAGTGGTAATTTTCCTTGCGAAGTTTGTGGCAAAGTTTTTGATCGTCCCTTTAGTCTAAAACGCCACAGTGCAGTACATTCCATTTCAAAACCGCATGAATGTAAAATTTGTACATATCGTTTCGATAGTCTTAATTTCTTAAAAGCTCATATGGTACAACATGACCGCATTTTGACTCAGTCACGCCCAGAAGGTTTTAAATGTCGTGATTGCCCAAGACGTTTTGAAAAACAAGCTTCGCTTTCAGCTCATCGCCAAATACACACCCGTAATGCGGCAGAAGCTAATTATCCATGTATGGTATGCCAACGTAAATTTATGTCGGTCAAATCTTTAACCGCACATATTACCAATAAACATCCGGAAGTAGAAAAACACAAATGTGACCAGTGCGTTAAAACATTTGTACTCTTTGATCATCTGATGGAACATTTAAATAGGCATAAAAGCAATAAACCTATAGTATGCCTAATATGTGAAAAAGAATTTGGCAATAAGTATACTTTGAAAGACCACATGCTTACGCATAGTGGAGAAAAACCTTATTTATGTCGGCAGTGCGGTAAAACCTTTCGAAGTGCAAGCAATTTACGTCAACATATGAAACGTCATACTAGTTTTAAGAAATATCGGTGCCCAGAATGTCCCAGCCGTTTCAACTGCCGTTCAGATCTGAAACAACATAAATCAACACATACTTATGCCAAACCACATGTATGCGATGTATGTGGTTCAGGTTTCACGCGGGCCGCTTCTCTGAAAAAACACAAGTTATTACATACTGGAGAATGGGATTTCAAATGTAACCAATGTAGTATGTCATTTACAATTATCGATCATTTACGACGTCATATGCGTACCCATACCGGGCAGAAACATATTATAATAGCAGATAAAAATCATCATTTAACGATAGGAATTCCAAATGCCTCTGGTGGATCACCATAG
Protein Sequence: MSCDLLTKCRTCLCESHIFHKIYDCVDENYKILEMLNGIVPQIDIKISSNYSSLVCQSCVDKLVASYKFQQLCIETNKRLNDLMGFSIFETASLTGESSFKMEIEVEDDARFECGKNPKELEESSDNVSDWVPDHNTDNDTDSRYIMKTFKAHLLTHDNEDITQSNIEVNNKRRDEINIDINEQNYCKDNDIVKDTQCSDCPKCFEKEAFLSAHYDMHAKKTKNKCNKDTKNEDGVDEADVEKLKSLKNENETELDIEKVSKVNIKEKIEAIEDRMDDDNSEKNAFNKPGAKHIKNKDFIDTGIREIEKPSNRRSGNFPCEVCGKVFDRPFSLKRHSAVHSISKPHECKICTYRFDSLNFLKAHMVQHDRILTQSRPEGFKCRDCPRRFEKQASLSAHRQIHTRNAAEANYPCMVCQRKFMSVKSLTAHITNKHPEVEKHKCDQCVKTFVLFDHLMEHLNRHKSNKPIVCLICEKEFGNKYTLKDHMLTHSGEKPYLCRQCGKTFRSASNLRQHMKRHTSFKKYRCPECPSRFNCRSDLKQHKSTHTYAKPHVCDVCGSGFTRAASLKKHKLLHTGEWDFKCNQCSMSFTIIDHLRRHMRTHTGQKHIIIADKNHHLTIGIPNASGGSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -