Basic Information

Insect: Cordilura impudica
Gene Symbol: -
Assembly: GCA_963682025.1
Location: OY821517.1:370135767-370148180[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.14 42 7.6 1.3 1 23 273 296 273 296 0.91

2 25 0.001 0.32 14.2 1.2 1 23 302 325 302 325 0.97

3 25 7.5e-05 0.023 17.8 2.8 2 23 356 377 355 377 0.97

4 25 0.0017 0.52 13.6 1.9 1 23 453 476 453 476 0.96

5 25 4 1.2e+03 3.0 0.9 2 23 484 505 483 505 0.94

6 25 3.4e-05 0.01 18.9 0.8 2 23 549 570 548 570 0.97

7 25 0.012 3.7 10.9 1.2 2 20 582 600 581 603 0.92

8 25 0.005 1.5 12.1 4.3 1 23 680 703 680 703 0.96

9 25 0.0022 0.69 13.2 0.5 1 20 710 729 710 731 0.95

10 25 0.15 45 7.5 0.2 2 23 743 765 742 765 0.93

11 25 0.00043 0.13 15.4 0.4 2 23 780 801 779 801 0.97

12 25 2.4e-07 7.4e-05 25.7 1.5 1 23 807 829 807 829 0.98

13 25 0.37 1.1e+02 6.2 2.6 1 23 980 1004 980 1004 0.95

14 25 0.51 1.6e+02 5.8 1.6 1 23 1041 1064 1041 1064 0.93

15 25 4.5e-05 0.014 18.5 2.7 1 23 1078 1101 1078 1101 0.96

16 25 0.0037 1.1 12.5 3.1 1 23 1108 1130 1108 1130 0.97

17 25 0.0043 1.3 12.3 0.1 2 20 1157 1175 1156 1176 0.94

18 25 0.0039 1.2 12.4 3.1 1 23 1234 1257 1234 1257 0.98

19 25 0.41 1.2e+02 6.1 0.7 1 23 1294 1317 1294 1317 0.95

20 25 0.12 37 7.8 6.1 1 23 1349 1372 1349 1372 0.97

21 25 7.3e-07 0.00022 24.2 0.8 2 23 1398 1419 1397 1419 0.95

22 25 9.1e-06 0.0028 20.7 1.2 1 23 1425 1447 1425 1447 0.99

23 25 2.5e-06 0.00077 22.5 2.9 1 23 1453 1475 1453 1475 0.99

24 25 1.2e-06 0.00038 23.5 1.6 1 23 1481 1503 1481 1503 0.99

25 25 0.06 18 8.7 0.8 1 23 1509 1533 1509 1533 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.14	42	7.6	1.3	1	23	273	296	273	296	0.91
2	25	0.001	0.32	14.2	1.2	1	23	302	325	302	325	0.97
3	25	7.5e-05	0.023	17.8	2.8	2	23	356	377	355	377	0.97
4	25	0.0017	0.52	13.6	1.9	1	23	453	476	453	476	0.96
5	25	4	1.2e+03	3.0	0.9	2	23	484	505	483	505	0.94
6	25	3.4e-05	0.01	18.9	0.8	2	23	549	570	548	570	0.97
7	25	0.012	3.7	10.9	1.2	2	20	582	600	581	603	0.92
8	25	0.005	1.5	12.1	4.3	1	23	680	703	680	703	0.96
9	25	0.0022	0.69	13.2	0.5	1	20	710	729	710	731	0.95
10	25	0.15	45	7.5	0.2	2	23	743	765	742	765	0.93
11	25	0.00043	0.13	15.4	0.4	2	23	780	801	779	801	0.97
12	25	2.4e-07	7.4e-05	25.7	1.5	1	23	807	829	807	829	0.98
13	25	0.37	1.1e+02	6.2	2.6	1	23	980	1004	980	1004	0.95
14	25	0.51	1.6e+02	5.8	1.6	1	23	1041	1064	1041	1064	0.93
15	25	4.5e-05	0.014	18.5	2.7	1	23	1078	1101	1078	1101	0.96
16	25	0.0037	1.1	12.5	3.1	1	23	1108	1130	1108	1130	0.97
17	25	0.0043	1.3	12.3	0.1	2	20	1157	1175	1156	1176	0.94
18	25	0.0039	1.2	12.4	3.1	1	23	1234	1257	1234	1257	0.98
19	25	0.41	1.2e+02	6.1	0.7	1	23	1294	1317	1294	1317	0.95
20	25	0.12	37	7.8	6.1	1	23	1349	1372	1349	1372	0.97
21	25	7.3e-07	0.00022	24.2	0.8	2	23	1398	1419	1397	1419	0.95
22	25	9.1e-06	0.0028	20.7	1.2	1	23	1425	1447	1425	1447	0.99
23	25	2.5e-06	0.00077	22.5	2.9	1	23	1453	1475	1453	1475	0.99
24	25	1.2e-06	0.00038	23.5	1.6	1	23	1481	1503	1481	1503	0.99
25	25	0.06	18	8.7	0.8	1	23	1509	1533	1509	1533	0.91

Sequence Information

Coding Sequence: atggataataattcactaaaaaagtgttttataaacGGAGTTGAGTACAAATGCCGCACGTGTTTTGATCCAGGAAGCAATGTTTGCTCTCTCACCGAAGAGTCTGGGAAAAGTAAAACTTGGCGAGATTTGTTAAGAGAAATTGTACATTTGCAGACGTCCGATAATGATTTACTGCCGAATACTGTGTGCAGCAAATGTTCCAGGAAACTTCAAAGTTTTTATGAGTTTTTGATGCAGGCTCACAGggtgaataaaaaatatttaaatttactgGGTAATTGCCTTGACCCCCTGAAGGATGGCGTATTGAATGATAAGGATTTATTCTCAGACTGCTTGGAAGAATCCTCTATTGATATACCATTGCAACAATATATTCCAGAAATTAAATTGGAGGAAGATATAGCTGATCAATTTAGTATTGTATTGTTACACAAAGTTCAAGCACAGGAAATTCAACCTACCAAGCTAAAGCATGAAAATGAAGttGAACTTAATTCGGTACAATTAAGTATTTGTGAAGAATTGAAAGGGGATAGTAGCAGACTTAGTGATGAAAATAAAGGGTATCATACAATATCAAGCCCTCTACAGCAAAAAATTCAACGATATAGCTTAGACCATGAAAATATCAGTGATCATCATAATGATATCAATACTGTTGACAGcGCAACATCTTCCTCAGATGAAAGTGATTATGTACCGCCAAAACGGACGAAAAAACCAAGTAGCAGtAAAACTGCTGCTGGCAAACGTAAAATCGGTCGTCAAGCTCCAGATTATTATGATAAAATCCAAAAAGTCAATGACCGGTTTGTTTGTCTAATCTGCCAAAAAACGTTTTCCCTGCGTAAAGACTGTGGTCGCCATATAGCTTCGATACATTTACGCCAAACAAAATTTCCCTGTGAATTCTGTGGACAAAACTATAGTCGCAAGGATAAAGTTCGTCAACACGTCAAACGTATGCATTCCGACAGACCAGTGTATCCAAAGACCAAACGTAAAGAATGGATATTTGGAGACCGTCTTTATAGCAGACCTACAGTTTGGCGGCTAGTAGAATGTCATTTGTGTAACACAACTTTTAGTACAACCAAGGAACTAAGGAAACACCTTGAAACGCATTCCAGTAGCGAATCTTTGAAGAACTTGCAGTTGGATAGCGAAATTGTACAGTATTTGTTTACAAACGTGCTGGATTTAAACCtcgttaaagaaaatatttgcaaaGATATTCGGGAAAAGAACTGGTTTAAATATTATACTGTGTTAAATGAATATTCTTATGAGATGTCCATTAGCGATACGGAAGTAGAAGATTTAGATGCAGATCATCACGACACTTCAAAATACAATTGTGCTTTGTGTCAAAAAACTTTCTCGTTTAAACACCAAGTTTTTGCTCATATAAAAGAAGCTCATACGAATGATGAAATCTCATTGAAATGTGGTTTATGCAAATTAGAATTTGTAAGCTCTGTAATATATGAACATCATTCGCAAACACATTGTCGCAATAAGAATAAAGTTTTACTTTGTACAAGATGTCCAGCAAAATTTGTTTGGccagaaaatatgaaaaatcataaCTGCGCCACCAAGTGGGTGGAGCCATCGACTACAACCAAAGATGTTCTGAAATGTAATATTTGCGATCGGACGTTTGAAGTAAAAGCTAAACTAAAAAAGCACTTAGAATCTCATAATCATGGTAAGACTTCAACAAAAACCATTATACGGTGTGGTCTTTGTACACAAACATTCGAAAAACTGAAACATCTACGTAACCACATGCCTGTGCATTCCGATGGTAAAACTGGCATAGATTATAAAAacagcatatatttaaaaagatttgagAGATCAAAGACTCCCGATTCTGCTCTGATACAGCTGGAGATacagaatttattcaaaaaatcccAGATAAGTCGTTTCTATAGAGCCATTGACAAAGAAGGTAATGAAATGGACATATTAGATTCAGATAGCGAACCAGATGAGGACTGTGACATAGCTGTAAAAGCGGAATACAAATGTGAACTTTGCCATATGTTCTTTCAGCGACGGAAACTCCTATTGAAGCATCAAAACGAACAACACAATGATGTACCACTGCCATTTACGTGTAATAACTGCACAAAACAATACGTAAGTAAAGAGTTACTACAACAACATTTAGTTAGGGATTGTTGGAACGAACATCGTCGAATAGCCCAGCAATGTGAATATTGCAATGCCCGTTTTATATGGCCGAACAACTTAGTCAAACATAAAGACATCCAGCATAAACATCAAAAACAACCAAAACCTCTAAGGGCTAGCACTCTGAAGTGTGAATATTGTGAGAAAGTTTTTATATGGCCCAAAGATTTAGTACGCCACCGAAAAACCCACACAGAGGGAAAGAAGTTCTCCTGTCCCCATTGCGATCGAAAATTTCAACGTAAAGACAATTTAATCGCTCATATACGAATTCATGATCCCGATGGGGCACCAATAGTTTCTAATTCCACTAAAACCGTTGATTACATACTGCCACATTTAATCAAGCCTCACGGTTGTAAAAGAATCAAATGTATGATCTGCTATTCGGAACACAATCGCATACGTGACTTACGTTCGCACTTGCGATCCCATCGATACTCAATAAATtttgagaaaagaaaagaaaCTGAAATGATTGATTATATATCAACACAACTCTATCCCGAAGATCATCCCATAGCCGAGGAGGAGGATTTGATTAAACGCATTGCTTCCGATATAGCAGCAGAAAATAATTTAGAACGCTTCTATTCGATAACCAATGAAAATGGCTATGAAGTTAGCTTAGATAGTTCCGAAACGGAGAGTGATTCGGATGGTGATAGTGATGTTGGTAAAGAGGAAAAACTACCCAAGTCTGAGTCGGAAAAAGCCAAACGTATTTATAAATGTGATATTTGCCCTCATCTTGGCTTTAATAGGAAATATAAACTTTATGATCATCAAAGCCAGACTCATAGCTGGGAAGAGGCTCGCCACATCTGTATACATTGTAATGGACGGTTTTTGTCATCGTATATGTTGCAATTGCACTACAAGAAACAATGTAAAAACTCGAAAAAACGTCACTCTTGTCGCCGATGTCCATTACGATTCATGTGGAAAAGTAATCTTAAGGCTCATTTTATAATGGATCATGCTCATGAAGTCGCCAAAGAAATCGAAATTAAAAGCCGCTTCGAATGTTTTCTGTGTCAAAGGAAATTCTCACAACAACGAGAGCTTACTCGCCATATGACTTCAAATCATTCTGCCGATTCTGAAATTCATTATTGTCTACTCTGTCCCAAAACATTTTACGGCCTTGAACATCTCAACGACCATTTAAATCGGCATCGTTTAACAGCCGATGACATCAATAGTGTGGAAAGCATCATACATTCGACGTGTTGGCCGAATGGTGACAAAATTATCAAATGCAAAGTATGTGGTTTAGAATTCACCAGCATGTCTTCATTAGCAGAACATCTTTCACCTGGAAACCCCCAGAACTTGTGCGCTGTAGAACATTCGATTTCAAATTATTCGATAACAAATCACAAAGGATTCGAATTACACCTGGAACTAGATTCGGAAACGGAAACAGAGGAAACATTGCAGCATAACGATGACGAACAAGAGAATCATAGAGATCTATCTTATCCCTACACCTGTGCTCTGTGCAGTATATCTTGTAAACGAAAATATCAAATGGCTCAACATCAACGTTCTATGCACAATTATGAGGGACTCGTATTAAAATGTGAATGTTGCATTTTTCGAACAGTATGCCAGaaaattttggacTACCATAAAACTACTCAATGCTTTAATGTCGATAAACAACACCAGTGCGTTCGCtgtaaatttaagtttatgtgGCAGGAAAATCTGGAAAATCATATTGCCATAATACATTCTCCCCTAGATGATGCTATAACTCAAGATAGGGAGCCACCACCACCAATCGTATCGAAAATAATATCTCCAAATAAGAATGATCCCAATATTTTCGAATGTATGGATTGTCATCGACGTTACAATCGTCGAGATCGTTACAAGGCTCACTTTAAAAAATTCCACAACACTGATAATGTAGCGGCAATCAGTGACTCTAAAGTTCGCAAACAATCcataacgaaaaaagaaaaaaactttttatgtgCTTTTTGTGGTCTTTCATTTTCGAATAATTCAAATCTAACGGTCCACATGAGACGCCATACCGGTGAAAAACCATTCAAATGTGATCTTTGCGAAATGGCCTTCCCACGCTCATCAGATTTGCATGCTCACCGGCGTACACATACCGGCGAACGGCCATATAAATGCATGTATTGTGAAAAATCATTCTCGCgtcaatataaattaaatgtcCACACCCGTATTCACACCGGTGAACGACCATATCAATGTACATATTGTGAAAAAAGTTTCATTCAATCCAATGATTTGACATTACACCTTCGTCGCCATACTGGTGAGAGACCATATTTGTGTGACATCTGTGGGGAAGGCTTTATTTGTGCCACATCGTTAAAACAACATCGTAACACAAAAGGTCATTTAGGTAACACTGTGGAGGTAGAAGATCGGCCACCGCCCACTTTAGCACACTTTgagatgaatttctaa
Protein Sequence: MDNNSLKKCFINGVEYKCRTCFDPGSNVCSLTEESGKSKTWRDLLREIVHLQTSDNDLLPNTVCSKCSRKLQSFYEFLMQAHRVNKKYLNLLGNCLDPLKDGVLNDKDLFSDCLEESSIDIPLQQYIPEIKLEEDIADQFSIVLLHKVQAQEIQPTKLKHENEVELNSVQLSICEELKGDSSRLSDENKGYHTISSPLQQKIQRYSLDHENISDHHNDINTVDSATSSSDESDYVPPKRTKKPSSSKTAAGKRKIGRQAPDYYDKIQKVNDRFVCLICQKTFSLRKDCGRHIASIHLRQTKFPCEFCGQNYSRKDKVRQHVKRMHSDRPVYPKTKRKEWIFGDRLYSRPTVWRLVECHLCNTTFSTTKELRKHLETHSSSESLKNLQLDSEIVQYLFTNVLDLNLVKENICKDIREKNWFKYYTVLNEYSYEMSISDTEVEDLDADHHDTSKYNCALCQKTFSFKHQVFAHIKEAHTNDEISLKCGLCKLEFVSSVIYEHHSQTHCRNKNKVLLCTRCPAKFVWPENMKNHNCATKWVEPSTTTKDVLKCNICDRTFEVKAKLKKHLESHNHGKTSTKTIIRCGLCTQTFEKLKHLRNHMPVHSDGKTGIDYKNSIYLKRFERSKTPDSALIQLEIQNLFKKSQISRFYRAIDKEGNEMDILDSDSEPDEDCDIAVKAEYKCELCHMFFQRRKLLLKHQNEQHNDVPLPFTCNNCTKQYVSKELLQQHLVRDCWNEHRRIAQQCEYCNARFIWPNNLVKHKDIQHKHQKQPKPLRASTLKCEYCEKVFIWPKDLVRHRKTHTEGKKFSCPHCDRKFQRKDNLIAHIRIHDPDGAPIVSNSTKTVDYILPHLIKPHGCKRIKCMICYSEHNRIRDLRSHLRSHRYSINFEKRKETEMIDYISTQLYPEDHPIAEEEDLIKRIASDIAAENNLERFYSITNENGYEVSLDSSETESDSDGDSDVGKEEKLPKSESEKAKRIYKCDICPHLGFNRKYKLYDHQSQTHSWEEARHICIHCNGRFLSSYMLQLHYKKQCKNSKKRHSCRRCPLRFMWKSNLKAHFIMDHAHEVAKEIEIKSRFECFLCQRKFSQQRELTRHMTSNHSADSEIHYCLLCPKTFYGLEHLNDHLNRHRLTADDINSVESIIHSTCWPNGDKIIKCKVCGLEFTSMSSLAEHLSPGNPQNLCAVEHSISNYSITNHKGFELHLELDSETETEETLQHNDDEQENHRDLSYPYTCALCSISCKRKYQMAQHQRSMHNYEGLVLKCECCIFRTVCQKILDYHKTTQCFNVDKQHQCVRCKFKFMWQENLENHIAIIHSPLDDAITQDREPPPPIVSKIISPNKNDPNIFECMDCHRRYNRRDRYKAHFKKFHNTDNVAAISDSKVRKQSITKKEKNFLCAFCGLSFSNNSNLTVHMRRHTGEKPFKCDLCEMAFPRSSDLHAHRRTHTGERPYKCMYCEKSFSRQYKLNVHTRIHTGERPYQCTYCEKSFIQSNDLTLHLRRHTGERPYLCDICGEGFICATSLKQHRNTKGHLGNTVEVEDRPPPTLAHFEMNF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -