Basic Information

Insect: Cordilura impudica
Gene Symbol: -
Assembly: GCA_963682025.1
Location: OY821520.1:235442300-235445806[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 1.4e-05 0.0044 20.1 0.2 1 23 179 201 179 201 0.96

2 21 0.0007 0.21 14.8 0.4 1 23 207 229 207 229 0.99

3 21 9e-07 0.00027 23.9 1.4 1 23 258 280 258 280 0.98

4 21 1.8e-06 0.00056 22.9 1.1 1 23 341 363 341 363 0.96

5 21 3.9e-05 0.012 18.7 1.8 1 23 369 391 369 391 0.96

6 21 3.8e-05 0.012 18.8 0.5 1 23 403 425 403 425 0.98

7 21 0.02 6.1 10.2 0.4 1 23 431 454 431 454 0.95

8 21 0.051 16 8.9 6.3 1 23 460 482 460 482 0.98

9 21 0.0011 0.34 14.2 0.9 2 23 489 510 489 510 0.97

10 21 0.16 50 7.3 0.5 1 23 517 540 517 540 0.94

11 21 0.0011 0.35 14.1 5.0 1 23 546 568 546 568 0.98

12 21 0.00035 0.11 15.7 0.7 2 23 575 596 575 596 0.97

13 21 0.047 14 9.0 0.2 1 23 614 637 614 637 0.95

14 21 0.0015 0.46 13.7 3.9 1 23 643 665 643 665 0.98

15 21 0.0025 0.76 13.0 0.1 2 23 672 693 671 693 0.95

16 21 1.9e-05 0.0058 19.7 0.2 1 23 699 721 699 721 0.96

17 21 0.0028 0.85 12.9 3.7 1 23 727 749 727 749 0.98

18 21 0.00038 0.12 15.6 1.5 1 23 755 777 755 777 0.93

19 21 0.12 37 7.8 2.9 1 23 783 805 783 805 0.99

20 21 6.1e-05 0.019 18.1 3.8 1 23 811 833 811 833 0.98

21 21 0.00017 0.051 16.8 0.3 1 23 839 861 839 861 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	1.4e-05	0.0044	20.1	0.2	1	23	179	201	179	201	0.96
2	21	0.0007	0.21	14.8	0.4	1	23	207	229	207	229	0.99
3	21	9e-07	0.00027	23.9	1.4	1	23	258	280	258	280	0.98
4	21	1.8e-06	0.00056	22.9	1.1	1	23	341	363	341	363	0.96
5	21	3.9e-05	0.012	18.7	1.8	1	23	369	391	369	391	0.96
6	21	3.8e-05	0.012	18.8	0.5	1	23	403	425	403	425	0.98
7	21	0.02	6.1	10.2	0.4	1	23	431	454	431	454	0.95
8	21	0.051	16	8.9	6.3	1	23	460	482	460	482	0.98
9	21	0.0011	0.34	14.2	0.9	2	23	489	510	489	510	0.97
10	21	0.16	50	7.3	0.5	1	23	517	540	517	540	0.94
11	21	0.0011	0.35	14.1	5.0	1	23	546	568	546	568	0.98
12	21	0.00035	0.11	15.7	0.7	2	23	575	596	575	596	0.97
13	21	0.047	14	9.0	0.2	1	23	614	637	614	637	0.95
14	21	0.0015	0.46	13.7	3.9	1	23	643	665	643	665	0.98
15	21	0.0025	0.76	13.0	0.1	2	23	672	693	671	693	0.95
16	21	1.9e-05	0.0058	19.7	0.2	1	23	699	721	699	721	0.96
17	21	0.0028	0.85	12.9	3.7	1	23	727	749	727	749	0.98
18	21	0.00038	0.12	15.6	1.5	1	23	755	777	755	777	0.93
19	21	0.12	37	7.8	2.9	1	23	783	805	783	805	0.99
20	21	6.1e-05	0.019	18.1	3.8	1	23	811	833	811	833	0.98
21	21	0.00017	0.051	16.8	0.3	1	23	839	861	839	861	0.97

Sequence Information

Coding Sequence: ATGTCTTGTGATCTAATGACAAAGTGTCGCACTTGCTTATGCGATTCACACATATTTCACCAACTTAATGATTATGTGGATGAAAATTATAAGATTCTGGAAATGTTGGATGGTATAGTGCCTCAGATTGATATTAAGACCTTATCGAACTATTCAACTTTGGTGTGTCAATCGTGTGTGGATAAACTAGTGGCCGGTTATAAATTTCAACAATTGTGTATAGAAACCAACAAACGTCTTCATGATTTAATGGGCTTTTCCATCTTTGAGACTGTGCCTTTGACAGGAGAAGCtagttttaaaatgaaaatagaattTGAAAATGAGGCTTTTTTTGAATGCGAATTAAATCCCGAAAAATTAGAGAAATCATCTGGTAAAGATAGTGATTGGGTACCGGGTCATAATACGGATAACGATACTGATTCCAGCAATGAAAAACTTTCCGTTTTAAAAGAAAGAATAACCCAAAAATCTTCTTCAAAATCTGACGAAGGGGAaagACCCAGCAAAAATGATCGTCGTAGGGGACAATTTCCTTGTAGCGAATGTGGTAAAGTTTTTGATCGTTTATACCGGCTGAAGCGTCATGCAGCTGTACATGCAAAAATGGGTCCATATCGCTGTGAAATTTGTAAATATAGTTATGCTGCTGAAAACACCTTTAAAGCCCATATGTTAATGCATGAAAATGAAGATATAACTAAATCCAATATTGAAGTTAACAATGAAAGTAAAGAAGAAAATGATATTGTCAAGGACACACAAACATTTCAATGTCCCGATTGTCCCAAATGTTTTGATCAGAAAGCATATTTATCGGCTCACTATAAGGTGCATacaaagaaaacgaaaaataaatcgaATGAAGATGACGTCGATGAAGATGATTCAGAcGATGATtccaaaaaaaatgcatttacagAACCTGGAGCCAAACATATCAAAAATATGGATTTAATTGATACGGGCATGGGAgaaattgaaaaACCCTATAGCAGcaataaaaaaagtggtaattTTCCTTGCGAAGTTTGTGGCAAAGTTTTTTATCATGCTTATAATCTAAAACGCCACAGTTCAGTACATTCCTTTACAAAACCGCAtgaatgtaaaatttgtaattatcGTTTTGATAGAGTTTATAACTTAAAAGCTCATATGGTACAACATGACCGCATTTTGACTCAGTCACGCCCAGAAGGTTTTAAATGTCCTGATTGTCCAAGACGATTTGAAAAAGAAACTTCGCTGTCAGTTCATCGCCAAATACACACCCGTAAAGCTAATTATCCATGTATGGTTTGCCAACGTAACTTTATGTCGGTGGGATTTTTAACCAAACATATTATCAATAAACATCCGGAAGTGGAAAAACACAAATGTGACCAGTGCGATAAAACATTTCTACTTCATGATCATCTGATGGAACATTTAAATAGACATAAAGCCAATAAAAATCGAGTATGTCTAATATGTGAAAAAGAATTTGGCAAAACGAAATTTTTGAAAGAACACATGCGCACGCATAATTCGTCAGAAACTAATTATCCATGTATGGTTTGCGAACGTAACTTTATGTCGGTGAGATTTTTAACCGAACATATTACCAATAAACATCCGGAAGTGGAAAAACACAAATGTGACCAGTGCGATAAAATATTTGTACTTCATGATCATCTGATGGAACATTTAAATAGACATAAAGCCAATAAAAATCGAGTATGCCTAATATGTGAAAAAGAATTTGGCAATACGAAATTTTTGAAAGAACACATGCGCACGCATAGAGTAAAAAGTTCTTATTTATGTCCGTGTCCAAATTCGGCAGAAGCTAATTATCCATGTATGGTTTGCCAACGTAACTTTATGTCGGGGAGATCTTTAACCGAACATATTACCAATGAACATCCGGAAGTAGAAAAACACAAATGTGACCAGTGCGATGAAACATTTGTACTTCATGATCATCTGGTGGAACATTTAAATAGCCATAAAGGCAATAAAAATCTAGTATGCTTAATATGCGAAAAAGTATTAGGCAATAAGTATACTTTGAAAGAACACATGCTTGCGCATAGTGGAGAAAGTCGTTATTTATGTCCGCAGTGCGGTAACACCTTCCGAAGTGCAGGCAGTTTACGTGAACATATGGATCGTCATAGAGATTTAAAGAAATATCAGTGCCCAAAATGTCCTCTCCGTTTCAACTGCCGTTCAGATCTGAGGAAACATTCATCAACACATACTAATGCCAAACCACATGTATGCGATGTATGTGGATCACGTTTCACGCAGAAAGCTACTCTGCGAAAACACAAGGTATTACATTCTGGAGAACGGCCATTCAAATGTGACCAATGTAGTATGAAATTTTTAATGATCTATCAATTACGAAGTCACAAGCGTACCCATACCGGAGAGAAACCACATAAATGCAAATATTGTAAACGTGCCTATACCAAAGGTGGGGACTTAACTAGACATTTAAGGACTCATGTAGGCGAATATACCTATATGTGCGATCAATGTCCAATGGccttcaaaaagcaaccggaattGAAACAACATCAGTCGGAACATATTAAAATGGCTCAAAAACTCGCGCAACATCATCAGCAACTACCATTGCCTACAAACAATCATAACCAACAAATTATAATAGCAGATCAAAATCAGCAATTAACGATAGCAATTCCAAATCATCAGCAAATGGCTTTGGTGGATCACCATAGTCAGCAATTGCCAACAATTGTTGAACAAACACAGCAGCTTTCAGATATGAATGAAGTTGCCAGACTAGACAATATAGATATTAATAATCTCCCATCATAA
Protein Sequence: MSCDLMTKCRTCLCDSHIFHQLNDYVDENYKILEMLDGIVPQIDIKTLSNYSTLVCQSCVDKLVAGYKFQQLCIETNKRLHDLMGFSIFETVPLTGEASFKMKIEFENEAFFECELNPEKLEKSSGKDSDWVPGHNTDNDTDSSNEKLSVLKERITQKSSSKSDEGERPSKNDRRRGQFPCSECGKVFDRLYRLKRHAAVHAKMGPYRCEICKYSYAAENTFKAHMLMHENEDITKSNIEVNNESKEENDIVKDTQTFQCPDCPKCFDQKAYLSAHYKVHTKKTKNKSNEDDVDEDDSDDDSKKNAFTEPGAKHIKNMDLIDTGMGEIEKPYSSNKKSGNFPCEVCGKVFYHAYNLKRHSSVHSFTKPHECKICNYRFDRVYNLKAHMVQHDRILTQSRPEGFKCPDCPRRFEKETSLSVHRQIHTRKANYPCMVCQRNFMSVGFLTKHIINKHPEVEKHKCDQCDKTFLLHDHLMEHLNRHKANKNRVCLICEKEFGKTKFLKEHMRTHNSSETNYPCMVCERNFMSVRFLTEHITNKHPEVEKHKCDQCDKIFVLHDHLMEHLNRHKANKNRVCLICEKEFGNTKFLKEHMRTHRVKSSYLCPCPNSAEANYPCMVCQRNFMSGRSLTEHITNEHPEVEKHKCDQCDETFVLHDHLVEHLNSHKGNKNLVCLICEKVLGNKYTLKEHMLAHSGESRYLCPQCGNTFRSAGSLREHMDRHRDLKKYQCPKCPLRFNCRSDLRKHSSTHTNAKPHVCDVCGSRFTQKATLRKHKVLHSGERPFKCDQCSMKFLMIYQLRSHKRTHTGEKPHKCKYCKRAYTKGGDLTRHLRTHVGEYTYMCDQCPMAFKKQPELKQHQSEHIKMAQKLAQHHQQLPLPTNNHNQQIIIADQNQQLTIAIPNHQQMALVDHHSQQLPTIVEQTQQLSDMNEVARLDNIDINNLPS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00371432;
90% Identity: iTF_00371432;
80% Identity: -