Cimp080409.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cordilura impudica
Gene Symbol
znf423
Assembly
GCA_963682025.1
Location
OY821520.1:74611004-74617561[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 37 0.14 44 7.5 0.0 2 23 223 245 222 245 0.94
2 37 0.26 80 6.7 1.3 6 23 254 271 254 271 0.98
3 37 0.00074 0.23 14.7 2.7 1 23 277 300 277 300 0.93
4 37 0.00059 0.18 15.0 4.6 1 23 308 331 308 332 0.95
5 37 0.018 5.5 10.4 0.6 1 23 337 360 337 360 0.92
6 37 0.0039 1.2 12.4 0.3 2 23 363 384 362 384 0.97
7 37 2.6 8.1e+02 3.5 3.4 2 23 422 444 421 444 0.88
8 37 4.6e-05 0.014 18.5 0.3 1 23 450 472 450 472 0.98
9 37 2.5e-05 0.0076 19.4 5.4 1 23 478 501 478 501 0.98
10 37 0.054 17 8.8 0.1 2 23 700 722 699 722 0.96
11 37 0.14 43 7.5 0.6 6 23 731 748 731 748 0.98
12 37 0.0015 0.45 13.8 2.1 1 23 754 777 754 777 0.93
13 37 0.00024 0.075 16.2 2.1 1 23 785 808 785 808 0.95
14 37 0.078 24 8.3 0.6 1 23 814 837 814 837 0.92
15 37 0.021 6.3 10.2 0.6 2 23 840 861 839 861 0.97
16 37 8.1 2.5e+03 2.0 0.3 2 23 870 891 869 891 0.92
17 37 0.24 75 6.8 2.1 2 23 899 921 898 921 0.93
18 37 4.3e-05 0.013 18.6 0.6 1 23 927 949 927 949 0.98
19 37 0.00055 0.17 15.1 6.1 1 23 955 978 955 978 0.98
20 37 0.028 8.6 9.7 0.1 2 23 1177 1199 1176 1199 0.96
21 37 0.081 25 8.3 0.4 6 23 1208 1225 1208 1225 0.98
22 37 0.0015 0.45 13.8 2.1 1 23 1231 1254 1231 1254 0.93
23 37 0.00024 0.075 16.2 2.1 1 23 1262 1285 1262 1285 0.95
24 37 0.078 24 8.3 0.6 1 23 1291 1314 1291 1314 0.92
25 37 0.021 6.3 10.2 0.6 2 23 1317 1338 1316 1338 0.97
26 37 8.1 2.5e+03 2.0 0.3 2 23 1347 1368 1346 1368 0.92
27 37 0.24 75 6.8 2.1 2 23 1376 1398 1375 1398 0.93
28 37 4.3e-05 0.013 18.6 0.6 1 23 1404 1426 1404 1426 0.98
29 37 0.05 15 8.9 7.3 1 23 1432 1455 1432 1455 0.98
30 37 0.017 5.2 10.4 0.1 2 23 1653 1675 1652 1675 0.96
31 37 0.077 23 8.4 5.0 1 23 1707 1730 1707 1730 0.93
32 37 0.00033 0.1 15.8 1.4 1 23 1738 1761 1738 1761 0.96
33 37 0.0022 0.66 13.2 0.3 1 23 1767 1790 1767 1790 0.92
34 37 0.0044 1.3 12.3 0.4 2 23 1793 1814 1792 1814 0.97
35 37 0.04 12 9.3 2.8 2 23 1852 1874 1851 1874 0.92
36 37 1.9e-05 0.0059 19.7 1.2 1 23 1880 1902 1880 1902 0.98
37 37 0.00041 0.13 15.5 6.7 1 23 1908 1931 1908 1931 0.97

Sequence Information

Coding Sequence
ATGGTATGCAGATTGTGTTTGCAAAACAGTTCTGAagtaattgaaatatttaataacaaagggCAAGAGTTAAAAATAGCTGTGGTAATTGGTAAACATTTTTGGTTTGAGcCAAAAAATGAGGATCCCGTCTCGTCACACATATGCCACAGTTGTTGGACAAAGGTATCTGATTTTCACGACTTTTACAAATATGTCGAAAAGGCGCAGCAACTTTTGACAGTAGAAGTTATAGTTAAAACCGAGTACAAATTAACAGTTTCTGATATAACAGTTGAGGGTGTAGAATTAGCAAGTAAACATGAACTTGAGGATAAAATAGAAGAACAATATGAAGAGCCGTTTAATATAACATCTGATGTGTTAGCAGAGGACAATTATGGTGTAATGAAATTTGAGTTTCCGCCTGATTTGCATGACCAATCTATTGATATTGTAATTAATGAGAAAAAGAAAGATGATCAAGAACGGGACAAAGTAGAATCTCTTACCCAAAAAGCAACAACATCAAACAAAGCTGTTGTGGTTCCTTTGAATAATAAGGCtaattgtaatgaaaaaaaagctTCAAAACTCAGAATTAACAATGATCCAAGTAGATCTAATGTTATGACACAGGAACTGTCAGAAATTGTTAATCGTGAAATTTCTGAATATATGCAACTGAAATGTGATGTTTGTGGTATCGAGTTGGATACtttttatgatataaaaaatcATATGATGGCGGTTCATGATGTCCGTCCATACGTCAAATGTTGCGAAAAGAAGTTTATCACGCGTGCATTGTTATATCATCATATAAAGTTTCATTTAAACCCCGATATATATAAATGCGAAAAATGTTATAAAGTTTTCAGGGACAAACGTACTTTCACAAATCATAATATTTCTATACATCAGTCTGAAGATAGTAAAATATATCAATGTCCGCAGTGTCCTAAAAAGTTTGCTAGAAAGCATTTACTACAGGGTCATAAAACTAGGCAGCatcatgaaatattgaaatatttttgtacagAATGTAAAAGAGGATTTCCTTTTATGTCTGCTTTGACGTCTCACACGGCTTTAAGGCATGGAACAAAGTGTGATATCTGTTCTGAAGTAGTTACAGGGCAAGCCGCTTTTAAACGACATCAGCAAAAACACCAATGCATTGATGAACCAAAAGTGCAATGTGATCTCTGTGGTTCATGGCATAAAGACAAATTCAGTCTAATCAGACATAAAAGTTGGCATACGTATCAAGAACAACCAAAAGTTTGTATGTTTTGTCAAAAAACCTATCCTAATCGTAGGGCATTGTACAGCCATAGTCATCATGTTCACCAACGCAATGGCAAATACGTatgtaatatttgcaaaaaatcttATATAGTGGCAAAGTCCCTAAAAGAGCATATGTCAATACACACGGGACTCTCTTTGTACCGTTGTCCCCACTGCAGTCAAACGTTCAACAACAACTCCAATATGCGTAAACATCGTAAAAGGATGCATCCAAAGGAATTTGAAGAACTTCGAAAACTAAGAAAAATAAACTCTCGCAGGAAAATTATAATACCAGATATATCAGATGCAACACAGAATTCTGGTGAATTACCAAGTAAACATGAACTTGAGGAATATATAGAGGAACAATATGAAGAGCCGTTTAATATAACATCTGATGTGTTAGCAGAGGACAATTATGGTGTAATGAAATTTGAGTTTCCGCCTGATTTGAAAGACCAATCGATTGATATTGTAATTAATGAGAAAAAGAAGGATGATGAAGATATATCTGCAATACATGATGACAAAGGAGATGAAAGCGATTTGCAGCTCCtaattaatgataaaaaagaaTTCTTAAGGAATAAAATGTCCTCTGAACGGAACAAAGTAGAATCTCTTACTCAAAAAGCAACAACATCAAACAAAGGACGTGGACAACCACGTAAAGGTGATGTGGTTCCTTTGAAAAATAAGGCtaattgtaatgaaaaaaaagctTCAAAACTCAGAATTAACAAGGATCAAAGTGGATCTAATGTTCTGACAAAGGAACTGTCAGAAATTGTTAATCGTGAAATTTCTGAATATATGCAACTGAAATGTGATGTTTGTGGCATCGAGTTGGATACtttttatgatataaaaaatcATATGATGTCGGTTCATGATGTCCGTCCATACGTCAAATGTTGTGAAAAGAAGTTTACCAGGCGTGCGTGGTTATATTATCACATAAAGTTTCATTTAAACCCCGATATATACAAATGTGAAAAATGTTATAAAGTTTACTCGGACAAACGTAGTTTCACAAATCATAATATTTCTATACATCAGTCTGAAGATAGTAAAATATATCAATGTTCGCAGTGTCCTAAAAAGTTTGCTAGAAAGTATTTACTACAGGGTCATAAAACTCGGCAGCATTATCaagtattgaaatatttttgtacagAATGTAAAAGAGGATATCCTTTTATGTCCGCTTTGACGTCTCACACGGCTTTGAGGCATGGAACAAAGTGTGATATCTGTTCTGAAATAGTTAAAGGGAAAGTCGCTTTTAAACGACATCAGCAAAAACACCAACGCATTGTTGAACCAGAAGTGCAATGTGATCTCTGTGGTTCATGGCTTAAAGACAAATTAAGTCTAACCAGACATAAAAGTTGGCATACGTATCAAGAACAACCACAAGTTTGTATGTTTTGTCAAAAAACCTATCCTAATCGTAGGGCATTGTACAGCCATAAACAACATGTTCACCAACGCAATGGCAAATACGTatgtaatatttgcaaaaaatcttATATAGTGGCAAAGTCCCTAAAAGAGCATATGTCAAAACACACGGGACTCTCTTTGTACCGTTGCCCACACTGCAGCCGAACGTTCAACCACATGAGCAATATGAATATACATCGTAAAAGGATGCATCCAAAGGAATTTGAAGAACTTCGAAAGATAAGAAAAATAAACTCTCGCAGGAAAATTATAATACCAGATATATCAGATGCAACAAAGAATTCTGGTGAATTACCAAGTAAACATGAACTTGAGGAAAATATAGAGGAACAATATGAAGAGCCGTTCAATATAACATCTGATGTGTTAGCAGAGGACAATTATGGTGTAATGAAATTTGAGTTTCCGCCTGATTTGAAAGACCAATCGATTGATATTGTAATTAATGAGAAAAAGAAAGATAATGAAGATATATCTGCAATACATGATGACAAAGGAAATGAGAGCGATTTGCAGCTCCTAATTAGTGATAAAAAAGAATTCTTAAGGAATAAAATGTCCTCTGAACGGAACAAAGTAGAATCTCTTACTCAAAAAGCAACAACATCAAACAAGGGACGTGGACAACCACGTAAAGGTGATGTGGTTCCTTTGAAAAATAAGGCTAACTGTAATGAAAAAAAAGCTTCAAAACTCAGAATTAACAAGGATCAAAGTGGATCTAATGTTCTGACAAAGGAACTGTCAGAAATTGTTAATCGTGAAATTTCTGAATATATGCAACTGAAATGTGATGTTTGTGGCATCGAGTTGGATACtttttatgatataaaaaaacatatgatgTCGGTTCATGATGTCCGTCCATACGTCAAATGTTGTGAAAAGAAGTTTTCCAGGCGTGCGTGGTTATATGATCACATAAAGTTTCATTTAAACCCCGATATATACAAATGTGAAAAATGTTATAAAGTTTACTCGGACAAACGTAGTTTCACAAATCATAATATTTCTATACATCAGTCTGAAGATAGTAAAATATATCAATGTTCGCAGTGTCCTAAAAAGTTTGCTAGAAAGTATTTACTACAGGGTCATAAAACTCGGCAGCATTATCaagtattgaaatatttttgtacagAATGTAAAAGAGGATATCCTTTTATGTCCGCTTTGACGTCTCACACGGCTTTGAGGCATGGAACAAAGTGTGATATCTGTTCTGAAATAGTTAAAGGGAAAGTCGCTTTTAAACGACATCAGCAAAAACACCAACGCATTGTTGAACCAAAAGTGCAATGTGATCTCTGTGGTTCATGGCTTAAAGACAAATTAAGTCTAACCAGACATAAAAGTTGGCATACGTATCAAGAACAACCACAAGTTTGTATGTTTTGTCAAAAAACCTATCCTAATCGTAGGGCATTGTACAGCCATAAACAACATGTTCACCAACGCAATGGCAAATACGTatgtaatatttgcaaaaaatcttATATAGTGGCAAAGTCCCTAAAAGAGCATATGTCAAAACACAAGGGACTCTCTTTGTACCGTTGCCTACACTGCAGCCGAACGTTCAACCACATGAGAAATATGAATATACATCGTAAAAAGATGCATCCAAAGGAATTTGAAGAACTTCGAAAGCTAAGAAAAATAAACGCTCGTAGGAAAATTATAATACCAGATATATCAGATGCAACAAAGAACTCTGGTGAATTACCAAGTAAACATGAACTTGAGGAAAATATAGAGGAACAATATGAAGAGCCGTTTAATATAACATCTGATGTGTTAGCAGAGGACAATTACGGTGTAATTAAATTTGAGTTTCCGCCTGATTTGAAAGACCAATCGATTGATATCGTAATTAATGAGAAAAAGAAAGATGATCAGGATATATCTGCAATACATGATGACAAAGAAGATGAAAGCGATTTGCAGCTCCttattaatgataaaaaagaATTCTTAAGGAATAAAATGCCCTCTGAACGGAACAAAGTAGAATCTCTTACCCAAAAAGCAACAACATCAAACAAAGGCCGTGAACAACCAGGTGGTGATGTGGTTCCTTTGAAAAATAAGGCtaattgtaatgaaaaaaaagctTCAAAACTCAGTATTAACAATGATCcaaatggatctaatgttatGACACAGGAACTGCCAGAAATTGTTAATCGTGAAATTTCTGAATATATGCAACTGAAATGTGATGTTTGTGGTATCGAGTTGGATACtttttatgatataaaaaatcatatgagGTCAGTTCATGATGTCCTTCCATATGTCAAATGTTGTGAAAAGAAGTTTTGGACACGTGCGTTGTTATATGATCACATAAAGTTTCATTTAAACCCCGATATATACAAATGTGAAAAATGTTGTAAAGTTTTCTCAGACAAACGTACTTTCAGAAATCATAATATTTCTATGCATCCGTCTGAAGATAGTAAAATATATCAATGTTCGCAGTGTCCTCAAAAGTTTGCTAGAAAGTATTTACTAGAGATTCATAAAACTCGGCAGCATTATGaagtattgaaatatttttgtccAGAATGTAAAAGAGGATTTCCTTCTATGTCCGCTTTGACGTCTCACACGGATTTGAGACATGGAACAAAGTGTGATATCTGTTCGGAAGTAGTTAAAGGGCAAGCCGCTTTTAAACGACATCAGCAAAAACACCAACGCATTGTTGAACCAAAAGTGCAATGTGATATCTGTGGTTCATGGCataaagataaattaaatttaaccATACATAAAAGATGGCATAGGTATCAAGAACAACCACAAGTTTGTAATATTTGTCAAAAAACCTATCCAAGTCGTACGGCATTGTCCAGCCATAAACATCATGTTCACCAACCCAATGACAAATACGTatgtaatatttgcaaaaaatcttataaagtgGCAAAGTCACTAAAAGAGCATATGTCAAAACACACGGGACTCTCTTTGTACCGTTGTCCCCACTGCAGTCGAACGTTCAACAACAATTCCAATATGCATACACATCGTAAAAATATGCATCCGAAGGAATTTGAAGAATTTCGAGAGCTAAGAAAAATAAGCGCTCGTAGCATAGAGCCTATAATACCAACAATATCATCTTTATCAGATGCTACAAAGAACTCTGGTGAATTTGTTCCATTTTCGAGTAGTGTATTAGcactaataaaagaaaaacaagaacaTGCAAAATATGAATGA
Protein Sequence
MVCRLCLQNSSEVIEIFNNKGQELKIAVVIGKHFWFEPKNEDPVSSHICHSCWTKVSDFHDFYKYVEKAQQLLTVEVIVKTEYKLTVSDITVEGVELASKHELEDKIEEQYEEPFNITSDVLAEDNYGVMKFEFPPDLHDQSIDIVINEKKKDDQERDKVESLTQKATTSNKAVVVPLNNKANCNEKKASKLRINNDPSRSNVMTQELSEIVNREISEYMQLKCDVCGIELDTFYDIKNHMMAVHDVRPYVKCCEKKFITRALLYHHIKFHLNPDIYKCEKCYKVFRDKRTFTNHNISIHQSEDSKIYQCPQCPKKFARKHLLQGHKTRQHHEILKYFCTECKRGFPFMSALTSHTALRHGTKCDICSEVVTGQAAFKRHQQKHQCIDEPKVQCDLCGSWHKDKFSLIRHKSWHTYQEQPKVCMFCQKTYPNRRALYSHSHHVHQRNGKYVCNICKKSYIVAKSLKEHMSIHTGLSLYRCPHCSQTFNNNSNMRKHRKRMHPKEFEELRKLRKINSRRKIIIPDISDATQNSGELPSKHELEEYIEEQYEEPFNITSDVLAEDNYGVMKFEFPPDLKDQSIDIVINEKKKDDEDISAIHDDKGDESDLQLLINDKKEFLRNKMSSERNKVESLTQKATTSNKGRGQPRKGDVVPLKNKANCNEKKASKLRINKDQSGSNVLTKELSEIVNREISEYMQLKCDVCGIELDTFYDIKNHMMSVHDVRPYVKCCEKKFTRRAWLYYHIKFHLNPDIYKCEKCYKVYSDKRSFTNHNISIHQSEDSKIYQCSQCPKKFARKYLLQGHKTRQHYQVLKYFCTECKRGYPFMSALTSHTALRHGTKCDICSEIVKGKVAFKRHQQKHQRIVEPEVQCDLCGSWLKDKLSLTRHKSWHTYQEQPQVCMFCQKTYPNRRALYSHKQHVHQRNGKYVCNICKKSYIVAKSLKEHMSKHTGLSLYRCPHCSRTFNHMSNMNIHRKRMHPKEFEELRKIRKINSRRKIIIPDISDATKNSGELPSKHELEENIEEQYEEPFNITSDVLAEDNYGVMKFEFPPDLKDQSIDIVINEKKKDNEDISAIHDDKGNESDLQLLISDKKEFLRNKMSSERNKVESLTQKATTSNKGRGQPRKGDVVPLKNKANCNEKKASKLRINKDQSGSNVLTKELSEIVNREISEYMQLKCDVCGIELDTFYDIKKHMMSVHDVRPYVKCCEKKFSRRAWLYDHIKFHLNPDIYKCEKCYKVYSDKRSFTNHNISIHQSEDSKIYQCSQCPKKFARKYLLQGHKTRQHYQVLKYFCTECKRGYPFMSALTSHTALRHGTKCDICSEIVKGKVAFKRHQQKHQRIVEPKVQCDLCGSWLKDKLSLTRHKSWHTYQEQPQVCMFCQKTYPNRRALYSHKQHVHQRNGKYVCNICKKSYIVAKSLKEHMSKHKGLSLYRCLHCSRTFNHMRNMNIHRKKMHPKEFEELRKLRKINARRKIIIPDISDATKNSGELPSKHELEENIEEQYEEPFNITSDVLAEDNYGVIKFEFPPDLKDQSIDIVINEKKKDDQDISAIHDDKEDESDLQLLINDKKEFLRNKMPSERNKVESLTQKATTSNKGREQPGGDVVPLKNKANCNEKKASKLSINNDPNGSNVMTQELPEIVNREISEYMQLKCDVCGIELDTFYDIKNHMRSVHDVLPYVKCCEKKFWTRALLYDHIKFHLNPDIYKCEKCCKVFSDKRTFRNHNISMHPSEDSKIYQCSQCPQKFARKYLLEIHKTRQHYEVLKYFCPECKRGFPSMSALTSHTDLRHGTKCDICSEVVKGQAAFKRHQQKHQRIVEPKVQCDICGSWHKDKLNLTIHKRWHRYQEQPQVCNICQKTYPSRTALSSHKHHVHQPNDKYVCNICKKSYKVAKSLKEHMSKHTGLSLYRCPHCSRTFNNNSNMHTHRKNMHPKEFEEFRELRKISARSIEPIIPTISSLSDATKNSGEFVPFSSSVLALIKEKQEHAKYE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-