Basic Information

Insect: Cordilura impudica
Gene Symbol: -
Assembly: GCA_963682025.1
Location: OY821520.1:85186102-85192503[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 0.053 16 8.9 0.0 2 22 82 102 81 104 0.89

2 31 0.00061 0.19 15.0 0.2 1 23 110 132 110 132 0.99

3 31 0.00014 0.042 17.0 5.5 1 23 139 161 139 161 0.97

4 31 3.7e-05 0.011 18.8 1.7 1 23 167 189 167 189 0.98

5 31 0.00014 0.044 17.0 1.6 1 23 196 219 196 219 0.97

6 31 0.0014 0.44 13.8 1.6 3 23 251 271 250 271 0.97

7 31 1.5e-05 0.0045 20.1 2.1 1 23 277 299 277 299 0.98

8 31 0.00048 0.15 15.3 0.9 1 23 413 436 413 436 0.96

9 31 0.00087 0.27 14.5 1.6 1 23 441 463 441 463 0.99

10 31 7.7e-05 0.023 17.8 2.8 1 23 497 520 497 520 0.97

11 31 7.3e-06 0.0022 21.0 3.2 1 23 530 552 530 552 0.97

12 31 5.1e-06 0.0016 21.5 1.1 1 21 558 578 558 579 0.95

13 31 0.0085 2.6 11.4 2.6 2 23 729 751 728 751 0.96

14 31 0.13 40 7.6 4.0 1 22 757 778 757 781 0.91

15 31 0.0053 1.6 12.0 1.7 2 23 809 831 808 831 0.96

16 31 0.086 26 8.2 2.9 1 23 837 859 837 859 0.98

17 31 0.067 20 8.6 1.1 1 23 1071 1094 1071 1094 0.96

18 31 3.7e-06 0.0011 22.0 4.5 1 23 1102 1124 1102 1124 0.98

19 31 8.3e-05 0.025 17.7 2.6 1 23 1152 1174 1152 1174 0.96

20 31 0.0027 0.84 12.9 2.6 1 23 1180 1202 1180 1202 0.98

21 31 0.19 57 7.1 3.3 1 23 1210 1232 1210 1232 0.95

22 31 0.00026 0.08 16.1 2.3 1 23 1238 1260 1238 1260 0.97

23 31 0.0048 1.5 12.2 0.6 1 23 1270 1292 1270 1292 0.96

24 31 3.5e-06 0.0011 22.0 1.0 1 23 1298 1320 1298 1320 0.98

25 31 3.3e-05 0.01 19.0 1.1 1 23 1371 1394 1371 1394 0.96

26 31 5.7e-05 0.018 18.2 0.4 1 23 1400 1422 1400 1422 0.99

27 31 1.1 3.5e+02 4.7 6.5 1 23 1444 1466 1444 1466 0.96

28 31 0.023 7.1 10.0 6.1 1 21 1472 1492 1472 1494 0.94

29 31 3.6e-05 0.011 18.8 2.0 2 23 1499 1520 1499 1520 0.97

30 31 0.0029 0.87 12.9 1.3 2 23 1524 1546 1523 1546 0.95

31 31 0.037 11 9.4 0.6 1 23 1552 1574 1552 1574 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	0.053	16	8.9	0.0	2	22	82	102	81	104	0.89
2	31	0.00061	0.19	15.0	0.2	1	23	110	132	110	132	0.99
3	31	0.00014	0.042	17.0	5.5	1	23	139	161	139	161	0.97
4	31	3.7e-05	0.011	18.8	1.7	1	23	167	189	167	189	0.98
5	31	0.00014	0.044	17.0	1.6	1	23	196	219	196	219	0.97
6	31	0.0014	0.44	13.8	1.6	3	23	251	271	250	271	0.97
7	31	1.5e-05	0.0045	20.1	2.1	1	23	277	299	277	299	0.98
8	31	0.00048	0.15	15.3	0.9	1	23	413	436	413	436	0.96
9	31	0.00087	0.27	14.5	1.6	1	23	441	463	441	463	0.99
10	31	7.7e-05	0.023	17.8	2.8	1	23	497	520	497	520	0.97
11	31	7.3e-06	0.0022	21.0	3.2	1	23	530	552	530	552	0.97
12	31	5.1e-06	0.0016	21.5	1.1	1	21	558	578	558	579	0.95
13	31	0.0085	2.6	11.4	2.6	2	23	729	751	728	751	0.96
14	31	0.13	40	7.6	4.0	1	22	757	778	757	781	0.91
15	31	0.0053	1.6	12.0	1.7	2	23	809	831	808	831	0.96
16	31	0.086	26	8.2	2.9	1	23	837	859	837	859	0.98
17	31	0.067	20	8.6	1.1	1	23	1071	1094	1071	1094	0.96
18	31	3.7e-06	0.0011	22.0	4.5	1	23	1102	1124	1102	1124	0.98
19	31	8.3e-05	0.025	17.7	2.6	1	23	1152	1174	1152	1174	0.96
20	31	0.0027	0.84	12.9	2.6	1	23	1180	1202	1180	1202	0.98
21	31	0.19	57	7.1	3.3	1	23	1210	1232	1210	1232	0.95
22	31	0.00026	0.08	16.1	2.3	1	23	1238	1260	1238	1260	0.97
23	31	0.0048	1.5	12.2	0.6	1	23	1270	1292	1270	1292	0.96
24	31	3.5e-06	0.0011	22.0	1.0	1	23	1298	1320	1298	1320	0.98
25	31	3.3e-05	0.01	19.0	1.1	1	23	1371	1394	1371	1394	0.96
26	31	5.7e-05	0.018	18.2	0.4	1	23	1400	1422	1400	1422	0.99
27	31	1.1	3.5e+02	4.7	6.5	1	23	1444	1466	1444	1466	0.96
28	31	0.023	7.1	10.0	6.1	1	21	1472	1492	1472	1494	0.94
29	31	3.6e-05	0.011	18.8	2.0	2	23	1499	1520	1499	1520	0.97
30	31	0.0029	0.87	12.9	1.3	2	23	1524	1546	1523	1546	0.95
31	31	0.037	11	9.4	0.6	1	23	1552	1574	1552	1574	0.97

Sequence Information

Coding Sequence: aTGGACCCTAAACTAGGAGGGAAATGTCACGCCGAGGATCACGACTGTTGTGTTCAAGTGTTTAATAAACAAGTAGAAGAAGTTTTAAATGGAATAGTTACCAAAGAGAAACTATATTTGGAGATTTCCAAAACAGTGTGTGCTGAGGATTCAATAAAGTCGCAACAAACACCGAGACTCGATGATAACAATAGCAATGAGAGCCAAAGACCACATAGTGAAGAGCTTCTGCAGACGGACAACCAATGTGCAGTTTGCGAAAAAATATTCGATTCGCAGCAGTTACTTATTATACATGCCATAGACGACCATCCCAATGATAAGGCTTTTAAATGTGCTGATTGTAGTGAAGTTTTTTCCAAAATAGGTGGCTTAGCCAGTCATAGAAAAACTCATGACGATTTGTCAAAGAATCATGTTTGTGAATCTTGTTCGAAAGTCTTTAAAAGCAACTACCACTTGAAACGTCACTTAAGTTCGCATACTACAAAACGTATCTACGCTTGTCCTTTGTGTGAAAAAACCTGTAAAAACGAGTACCTTTTGCAGGTCCATCAGAAGACCCACTTTAAGCCGAAATCGAATCATTCATGTAAATTATGTTCCAAATCTTTTATTTCTCTTAACACTTTAAAGATTCACTTAAGGGTGGCACACAATGCAGAACGTGTTCCTATAAAAACGCCACAAAATCATGCTTCCTCTAAGAGTAAAGATGGTTTGAAATCCGAGAgagcaaagaaaaatatttgtactTTTTGTTCCAAGTCCTTCTTACGCAAGGATATGTTGAAACGTCACTTAATGGTACATTCTGGAGAACGTCCCTACCCATGTTCTATGTGTAATAAAGCATATAAAGATAAACGTGATTTAAACCATCACCTAAAGATTCACTCGAAAGAGAGATCGAAAACTTGtgacaaaaatttaaacatttcaaaATCGCACGAAAAAAACCTTTTAAGGGAATCTAATAACTATAAAACCAAGGATGTGTCAATGCAATTCGTGGACTATATTCTTCCGCATGTTCCAATATCTTTAATAGATAAAGAAGAAACTATAGATGGTTTGGATAAAAAATATGAGTCTAAAAATAAGTACATATATGAAGAAGCAAAAAAACCGAGAGCTATTGCGCATTTACAAGTCATTTCTATTTCAAAAGAACAAACCgttgaaaaatgtaatataacAGAGAGTCAAACAAATAGTAATGACAAACAATTTGGCTACAAATGCGCTGTTTGTGATAAGatgttcaaCTTCGAAAGAGATTTTATTAGACATGTTAAACAACTTCACAATAGTAAAGCTTTTAAATGTCGTTATTGTACTGCTAGTTTTTTTAATGCAAGAGCTTTATCGAATCATAGAAGAATTCATAAATATAGAAACCGACTTATTTGTGGATTTTGTTCCAAGTCCTTTACTTGCATTTCATATTTAAAATGTCATTTAGAAGTTCATACTGTTGAACGTCCTTATACTTGTTCGCTTTGTGAGAAAACCTATAAATATAagagagatttaaaaaaacacgAAAGAATTACCCACTTAAGATTGAATGTAATGGAGAATTGTCATGTTtgtaaattttgttcaaaaacttttgatcGCCCATCCAAGTTGAATCGACATATAAAGGTTCATACTGGTGAACGACCTTTCTCTTGTTCTTTGTGTGGAAAATCCTTCAAGCACAACGTTAATTTAACgactcatcaaaatatttgcccGCAGTCGACATCATCTTTGTATGAAAACCCCATAGAAAACCATAAAATGATAGACTTAGAAGAAGATGAGTATATCACTGTTAAATGCGAAGCAAATAAAGAATCAACTAATGTTGAAAGTCCACTTCGTTTCGATCTTTCGAACAAGTTTTGCCAATACGACGAACTTTCTCTAAAAGATAATGAAAACCACGAAAGCTTCAGTATAAAAGACAGCGAAATGATTTATTCGGATAATGACTCTATCGATGGAAAGAATATTTTGGAAGTATTTAAAACCGAATGTATATCAACCGAAGTAGTTCATCCTGCTGTTGAGCGTTCAAAAGATGCTACCATTAAAACTAAAATCCAACAAAAACCGATTACTGACAATGATAATCGCATCAACAAGAAAACAACAAAACGACATGGTATCAAAAGGCAAATACAGACAAACAACAAATGTGCAGTTTGTAATAagatgtgtAATTCCCAGCGAGATCTTGTTAAACATGCTAGACAATTTCATCCCAAGGGTAAAGTTTTTCAATGTCCAACTTGTAGTACTGTTCTCTCCAATAAAAGATCGTTTAATATGCATAAAAAGATTTGCTTTCACTTAAAATCTTGTGCTTATTGCGAAAGAATCATGGCCGACGATGAGTTTTTCAAACGTCATTTAGTGATGCACTATGTCAATAAATGTGCAGTTTGTGAAaaggTGTGTAAATCACAAAAAGATCTGATTATTCATGCTAAAAAATTTCATACCAACGGCAAAGCTTTTAAGTGCCCTGTTTGTGATAAACTTTATGCCAGTAAAACACCGTTCAATTGTCATACGAGAACTCATAAAAACCAAGTCAAGGGAGATTTCTATATGTATCTGTatgaaaaaaagtataaacaaaatattgatttaggatttttaaaattattagaagaaaatgGATCTAATACAAATCTAAAACCGATCAATAATGATAATCAAATTAATGAAAATCAATGTGTAATGGAAAGTTATGAGGCAGAAGACGATTCAATGATTGCTGAATATCTAAGTGATTACGAATATATGGTAGATGAGGTTAGCAGCCAAAACGATGAAGATAACGCAAAAGAAACCATGAGTACAATAAACTCCCTCGATATAGAAATACTTTACAATAACACTcaagatgatgatgacgatgatgatgatttcGATGCTAAGAATGAATTGGATTTGTCGAATACCGAATTTATAGACGTTGAAGCCGTTGTGCTACCAGTTGATAATTTAGAAGACAATTCTGAGAAAAATGACACAAAACAAGAACAGGTCGTCGATAAAAGTCCTCCACCTACAGTAATTTCACCCAAACCCGCACGCCTGTACCAACCAATTGGTGTGAAAAGGAAACTACTGGCAGATAACAAATGTGCAGTTTGTCATAAGCGAGATTTAATTAAACATGCCCAACAATTTCATCGTAATGCAAGAGCTTTTAAATGTCAAAGTTGTAAAGCAAGATTTTCAAACAAGCAAGCCGTTTCGATTCATAATAGAATAAATCATACAAGCAACTTGTCCAAGAAGCATACTTGTAAGCTTTGTTCGAAATCTTTTACTCGCAAAGatgatttaaaaattcatttaaagactCACTTGCCAGACCCTCTGGCAGTTAAATACCCACCTGCAGTTATACAGATAACTAATTCTTCCGATGGCGAttcaaaaagaaaacatatttgtAACATATGTTCTAAAGGCTTTTCTAACAAATACCGTTTAAATCGGCATTTAAAAGCACATACCGTAGAACGGCCTTACTCTTGTTCAGTGTGTGGCAATAACTATAAACATGAGTATACTTTAAGGGAACATGAAAAGACACACTTggatttttcaaatagtaaacaTGCTTGTGAGTTGTGTTTCCGAACCTTTTCTTGTGCCTCTCGCCTGAATCGACATTTAATTGTTCACACTAAAGAACGTCCATACTCTTGTTCAATCTGTGGCAAAGCTTTTAAACATATGCAAAATATGAAGGTGCATGAAACTAAGCACTTAGGATTAGATCTAATAGAGAGAACACATGTTTGTGAAATCTGTTCCATGGCCTTTGCTGCCGAAAGACATTTGAAACGACACTTAGGTGTTCACACGGGAGAACGGCCCTATGCTTGTTCTATGTGTgaaaaagtctttaaaaataaaaacggttTGAACAAGCATCTTCAGACCCATCCAACTTATGAATTAAGTGAACAAGATAAAACAAAAGTAACGAACAAATCAAAAGAATCTGCCGTAAGTAGCAAACGTATAACAAGGAGGTCCGCAAAACTCCCAGCTGCTCGGAATGAAGCAGTGGTGGAAAGACATATACCGTCAGAATACAAATGTGGAGTATGTGATAAGacTTTCAATTCTCGGCGAGATTTAATACAACATGCCAAACAATTCCATCGAAATGCTAAAGCTTTCAAATGTGCAGAATGTGGTAGAGGATTTGTTAATACACAAGCTTTATCAAGTCATACAAGAACTCATATATATTCCACAAATAGTGGCAATGATCAATCGAATGCTTTTGAGAagccaaacaaaaatatatacatgtgcGAGTTTTGTTCTAAATCCTTCAGTTGTATGTCCCTTTTGCATCGTCATTTTAAGGCTCATAAAGTAGAACGTCCTTATTCTTGTTCTGTATGTAATAAAACCTATAAGCATTTAAATGATTTGAAGGTACATAAAAAATGTCACGTGAGAACAAATACTTGTGAATTTTGTTTCAAATCCTTTGCGCGCAGTGACAACTTGTTTCGTCATTTAAAGCTTCACGATTCGAACAAGTGTGCAATTTGTGATAAGATGTGCAGTTCTAAGGTAGATCTAGCTAATCATGCCAAACAATTCCATCCCAATGGTAAAGTTTTTAAATGCCAGGTTTGTGGCGATGTTACTGGCAGTAGAATTTCACTACATCGTCATATGGCGAATCATAAAGGTACTGAGTCTATAGAAAATCCCTATTCATTATCTGTATATGAAAAGAGCTGTGAGGAAAAGGAACCTAATCTGGGCGAAAATGATTTACAAGAATCTACACCAACCAATATCGGCGATGATATAGATGTTGTAGGAACTGGTGATAATCCATTCGTATCTGAGGTTTATGAAACGAACGAAGAGATTATTGTGGTGGACGACTTCGACTATACACAAGAgcttttccaaaatattgaagcAACCACAAATGCAGTAAATTCCCAGGATGTTATAGAAGATCTTTTTATTCGGATAGTAACTTCATAG
Protein Sequence: MDPKLGGKCHAEDHDCCVQVFNKQVEEVLNGIVTKEKLYLEISKTVCAEDSIKSQQTPRLDDNNSNESQRPHSEELLQTDNQCAVCEKIFDSQQLLIIHAIDDHPNDKAFKCADCSEVFSKIGGLASHRKTHDDLSKNHVCESCSKVFKSNYHLKRHLSSHTTKRIYACPLCEKTCKNEYLLQVHQKTHFKPKSNHSCKLCSKSFISLNTLKIHLRVAHNAERVPIKTPQNHASSKSKDGLKSERAKKNICTFCSKSFLRKDMLKRHLMVHSGERPYPCSMCNKAYKDKRDLNHHLKIHSKERSKTCDKNLNISKSHEKNLLRESNNYKTKDVSMQFVDYILPHVPISLIDKEETIDGLDKKYESKNKYIYEEAKKPRAIAHLQVISISKEQTVEKCNITESQTNSNDKQFGYKCAVCDKMFNFERDFIRHVKQLHNSKAFKCRYCTASFFNARALSNHRRIHKYRNRLICGFCSKSFTCISYLKCHLEVHTVERPYTCSLCEKTYKYKRDLKKHERITHLRLNVMENCHVCKFCSKTFDRPSKLNRHIKVHTGERPFSCSLCGKSFKHNVNLTTHQNICPQSTSSLYENPIENHKMIDLEEDEYITVKCEANKESTNVESPLRFDLSNKFCQYDELSLKDNENHESFSIKDSEMIYSDNDSIDGKNILEVFKTECISTEVVHPAVERSKDATIKTKIQQKPITDNDNRINKKTTKRHGIKRQIQTNNKCAVCNKMCNSQRDLVKHARQFHPKGKVFQCPTCSTVLSNKRSFNMHKKICFHLKSCAYCERIMADDEFFKRHLVMHYVNKCAVCEKVCKSQKDLIIHAKKFHTNGKAFKCPVCDKLYASKTPFNCHTRTHKNQVKGDFYMYLYEKKYKQNIDLGFLKLLEENGSNTNLKPINNDNQINENQCVMESYEAEDDSMIAEYLSDYEYMVDEVSSQNDEDNAKETMSTINSLDIEILYNNTQDDDDDDDDFDAKNELDLSNTEFIDVEAVVLPVDNLEDNSEKNDTKQEQVVDKSPPPTVISPKPARLYQPIGVKRKLLADNKCAVCHKRDLIKHAQQFHRNARAFKCQSCKARFSNKQAVSIHNRINHTSNLSKKHTCKLCSKSFTRKDDLKIHLKTHLPDPLAVKYPPAVIQITNSSDGDSKRKHICNICSKGFSNKYRLNRHLKAHTVERPYSCSVCGNNYKHEYTLREHEKTHLDFSNSKHACELCFRTFSCASRLNRHLIVHTKERPYSCSICGKAFKHMQNMKVHETKHLGLDLIERTHVCEICSMAFAAERHLKRHLGVHTGERPYACSMCEKVFKNKNGLNKHLQTHPTYELSEQDKTKVTNKSKESAVSSKRITRRSAKLPAARNEAVVERHIPSEYKCGVCDKTFNSRRDLIQHAKQFHRNAKAFKCAECGRGFVNTQALSSHTRTHIYSTNSGNDQSNAFEKPNKNIYMCEFCSKSFSCMSLLHRHFKAHKVERPYSCSVCNKTYKHLNDLKVHKKCHVRTNTCEFCFKSFARSDNLFRHLKLHDSNKCAICDKMCSSKVDLANHAKQFHPNGKVFKCQVCGDVTGSRISLHRHMANHKGTESIENPYSLSVYEKSCEEKEPNLGENDLQESTPTNIGDDIDVVGTGDNPFVSEVYETNEEIIVVDDFDYTQELFQNIEATTNAVNSQDVIEDLFIRIVTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -