Cimp076015.1
Basic Information
- Insect
- Cordilura impudica
- Gene Symbol
- -
- Assembly
- GCA_963682025.1
- Location
- OY821520.1:984902-987079[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 0.12 59 6.5 0.1 17 43 415 438 402 439 0.83 2 7 1.9 9.5e+02 2.7 1.1 18 43 446 470 438 471 0.78 3 7 5.8e-06 0.0029 20.3 0.1 17 44 479 503 473 503 0.91 4 7 0.091 45 6.9 0.6 6 25 537 556 533 565 0.83 5 7 0.012 5.9 9.7 0.5 6 29 566 587 563 599 0.80 6 7 0.68 3.3e+02 4.1 1.7 6 39 593 623 589 630 0.87 7 7 3.2 1.6e+03 2.0 2.5 6 38 622 650 619 654 0.80
Sequence Information
- Coding Sequence
- ATGATAGCGTTAACGAAAAATAACGCTAAAGAGCGTTGTCGAACTTGTTTGCGAAAGTTATTCAAAAATGAAGTTGATCCTGATCATTTGGATAGTTTAATAGAGTGTAGAATAAACTTTGTGGACATAAATAGCAATAAACAACTGCAAGAAATACTCGAAAAGTATGTGGTCATTGAGGAGAATAAGGATGTTAGTCAATATAGTGAGTATCCGCAAAATGTGTGCGTAGACTGTCTCAAACACATGCAGACGTTTGAGGTTTTTCGCAACAGGGCACTTAGCTGTGCTAAGAAGCTGCAGATAATCTTCAATGGCAACAGTACAATACACAAGATCGAACTCGATGATGATGGTGAAGAATGTAAACAATCCGAAAAAAATACTGGGATGCATGATAATGATATCTTTAATTTGTTGTTGAAAGATACTTTAATGGAAACCGAAGCTATTATGTTGGATGTACAGGAAAATGATAATAATTTACATAACATGGATCCAGATCCGTTCCAAGCTACCATAAAACTCCAGCCAGACAAACGAAGAACAAGAAAAAGTAAACGGAAGAAAGATATGAAAAATACAGCTGTCTCCACAAAGAAAACACGTAGAACCAAACATGCAAAAGATATTCCACATATAGAACAATTTAGTTCGACAGAAGAAACAAAACTGCAAGAAAATCTTGCATTAGAAACTAAAACTGAACATGCTGACATGGAAAGTGATGACTTCGAGTGGCAGCAATACGATAGCAATAATCAGGATCATGAACATGAGTTTTTAGACAATGAAGAacttcataaacaaaaaaaacattccaGAAGAATtcggaaacaaaaaattaaaaattcatacgCTGAAGTGGAAGATGGAACAGACTCTGAGTTTATTGCAGAACCTTTGACCAAGAATAGTAAGACGACAAAATCATGCAGAGCAATCACAAAATATGCCAACGATGATGGTAGGGAACATACCCCAGATAATAACACAAGAGTAGGCGATATTAAAAGCGAATTCGATTCCGATGTGATATCAACGGACAGCGAATATGGTATAAAACCAAACACAAATTTGGACGTCCCAAAGTCAACGAAAAAAAGACATTATATCATGAATAGTGGTCGAAAAAAGGGCTTAGCTAACAGTTTCAAGTGTGATCAATGCCAACATCGTTTTGGCCATAAACTTACGCTAGATGCACATGTGCGTAAAGTGCACGAAGGTCTGAAGAGAGCTTACCAATGCCAACTTTGCGACAAGGCCTACTCCTTTATCGGAGGACTTTCAACGCACATTAAGGATGTACATGAACGTCAACAGGACTCGTACGATTGCAATATAGAGGGATGTGATAAAAAGTATAGTAATGTTATAACACTTCAGCGACATATACGTTTCAAACATCTCAACTTCGAAGCACCAAACCAGTATGTCTGCGAGCAGTGTGGTGCCACATTCAAACAGACCTCAAATCTGCGATATCACATGAGAACTCGCCATCCCACTGAAGAGGATTTAAAACGTAAAGAGGAACTGCCAAAAGATCGCTTGGAATGTGAAGAGTGCAAGAAGTCATTTCATTCTCCATATACTCTCAAGTATCACAAACTGCGTGTACATGCGGATGAAAAGAAGTTCGAATGTAAAATATGTGGTCGTCGTGTGGCCAAGCAATTTATGTTGGACTCACATATGCTTGTACATTCCGAGCAGAAAATGGCATGTAAGTTTTGCGGACGGGAGTTTGTTCGTAAATATCAAGTGGAAGCCCACATTAGGGCGGTCCATCAAAAACTCAAACCTTTTCAGTGCCCCCATTGCAGTGAAAGCTTTGCCTCACGCAAAACTTTACGCCACCACATTTACATACATACCGGTGAAAAACCTTATGTATGCGACATCTGTGGTCAGGCTTATCGTCAACCAACATGTTTAAAGAATCATCGAAAAATCCACAATAAACTCAATTCAAATGAAGCGACAACTCTGGCAGTCAATCGCACTTTTTTGAATAACTTTATGCAAAACAATGACGTTAActttttacaaaacaataaagATGCTAATGACGATAAGGACAATGAAAAAGGTTTAAAATAa
- Protein Sequence
- MIALTKNNAKERCRTCLRKLFKNEVDPDHLDSLIECRINFVDINSNKQLQEILEKYVVIEENKDVSQYSEYPQNVCVDCLKHMQTFEVFRNRALSCAKKLQIIFNGNSTIHKIELDDDGEECKQSEKNTGMHDNDIFNLLLKDTLMETEAIMLDVQENDNNLHNMDPDPFQATIKLQPDKRRTRKSKRKKDMKNTAVSTKKTRRTKHAKDIPHIEQFSSTEETKLQENLALETKTEHADMESDDFEWQQYDSNNQDHEHEFLDNEELHKQKKHSRRIRKQKIKNSYAEVEDGTDSEFIAEPLTKNSKTTKSCRAITKYANDDGREHTPDNNTRVGDIKSEFDSDVISTDSEYGIKPNTNLDVPKSTKKRHYIMNSGRKKGLANSFKCDQCQHRFGHKLTLDAHVRKVHEGLKRAYQCQLCDKAYSFIGGLSTHIKDVHERQQDSYDCNIEGCDKKYSNVITLQRHIRFKHLNFEAPNQYVCEQCGATFKQTSNLRYHMRTRHPTEEDLKRKEELPKDRLECEECKKSFHSPYTLKYHKLRVHADEKKFECKICGRRVAKQFMLDSHMLVHSEQKMACKFCGREFVRKYQVEAHIRAVHQKLKPFQCPHCSESFASRKTLRHHIYIHTGEKPYVCDICGQAYRQPTCLKNHRKIHNKLNSNEATTLAVNRTFLNNFMQNNDVNFLQNNKDANDDKDNEKGLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00371473;
- 90% Identity
- iTF_00371473;
- 80% Identity
- iTF_00371473;