Cimp008387.1
Basic Information
- Insect
- Cordilura impudica
- Gene Symbol
- -
- Assembly
- GCA_963682025.1
- Location
- OY821517.1:78550020-78552178[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 4.7e-07 0.00023 23.8 0.2 3 43 68 105 66 106 0.90 2 5 9.1e-07 0.00045 22.9 6.7 3 44 127 167 125 167 0.94 3 5 1.7e-09 8.3e-07 31.7 4.0 2 44 223 262 222 262 0.95 4 5 2.1e-11 1e-08 37.8 5.2 1 43 305 344 305 345 0.97 5 5 0.086 42 7.0 0.1 3 43 376 413 374 415 0.86
Sequence Information
- Coding Sequence
- atggaagattATCAAATACTGGAAGGAGAGGATACATTAGTTGAAACAAGTGATATTTTTGAGGGCAACGTAGTAGATTCGCGTGATATTGAGGTGGCCGATTTTGAGACACTTGCTGAAGTCGAAACGGAAGACAAAACCGCAACGGAAACAAATTCAAACGCCGCCTTCAGTAACCATATTAAACGTAAATACAGTTTTGTTTGGCAATATTTTCGAGCGGTCGAGGGTAAAAATCAGTTCCAGTGTTTACTGTGTCAGTCTTGTGTGGGAAGTCAGACGAGTAATTTAGCACGACATTTGGCCTCAACACATGATATTACTAGGCGAAGAGATaaGGGTTTAGATTTAGTAAGAATACGGCCAAGTCATAGTTTTATTTGGAAATATTGCACTAAGGAGGATTCAAAGCACGCTCGTTGTCATCTTTGTAACAAAGTTTTGTATTGTGGAGGTGGTAATACAGCTAACATTACTAAACATTTAAGACGTTTGCATTCCGATCTAATTAAAGAGACCAAAAATACTCAAAGCTCCTCTAAAATGGATGATGAAACAATGCAAGCCACAGCTTCTCTTTCAAATCCAACGCCATACGAAGAAGATCATCATAGTCGGTCAAGTGCTGATATAATATCAGAACGAAAAGAACGCAGAGGTGTCAGTTATGTTTGGAGCTATGTTGAAAAGTTATCTCGCCATACCATACGTTGTAAACTATGTACCAAAGTAATGTCCTTTCATGGTACGGCCAATGTTATAACACACTTACAAAGACGTCACAATGTTCTGGGTGAACCAGGTTCACAATTAAATCAAATCGTAAATACGAAACAAGACCACATTCAAGATGAATGTGAAACTGCAGGATATAATGGCAAGAAATTCGGTAGAAAGTCTTTAAGTACAGCAAGTGTTGTATGGAAATATTGTACAAGAATTAGTCAAGATCAAGTGAGATGttgtttttgcaagaaaaatCTTTCCTATCAGGGCACTTCAAATTTGCAACGTCATTTGCATCGTATGCATGGTGTGGTAACACATGGACGCCTTAATAAGTCAATAGATGAGTTTGTGGCAATGAAGGAGAATAATTTTAAGTTACCAACAAATATAGATTTTGTATGGCAATTTTGTACACAGGAGGATGATCATCGTACAAAGTGCAATATGTGTGACAGTATTTTTGACACCAGGGATATGGATACATTAGTTAAACATTTAGCTTTGGAACATTCAGTGGAAACTAATCAATCAATTGACGGCGAGAGTAAACCCATCATAATGAGAACTAAAAAAAGGCACAGACATGTTGACTATGATACAGATGAAGACGATGATGACTATGATGGCAAATGGAGTAAATTGGACGATGCTGAAGATATTCaaatacaaacagaatttgatgaaacaaatataaaaaaggatGATTCTTTATATGATGACATTATAGAAGAAGATCATAATAATTACGATGAGGAACCATTTGATCCAAGTTTGATGCAGGATATGCCAACAGCTAATCCGCTATCACCACGTTCGTCACGTGGTGACACCCCCCAACCGCAAACAACTTTAAACTATCAACAACCACAACAAACATTGCAAACCGGTAATCTTCTACCTCCTTTGGAAACAAGAGTACTACTAAAACTTCAAGAAGATAGATTACGTATGGAAACAGATTACTTTCGTGAAAAAGCCGCTTATTATCGAATGCAAAAgtatttaactgcattgcaagcTAAAAAAGCGCGCATTGAATTGGAACGTCTAAGTCGTGGTGAGGCTACTTTCGTTGCAACGGGTGATTTAAATGGTGCCTATGTTGAAGTTATAGCTACTGAAAATCATATAACTACTTAA
- Protein Sequence
- MEDYQILEGEDTLVETSDIFEGNVVDSRDIEVADFETLAEVETEDKTATETNSNAAFSNHIKRKYSFVWQYFRAVEGKNQFQCLLCQSCVGSQTSNLARHLASTHDITRRRDKGLDLVRIRPSHSFIWKYCTKEDSKHARCHLCNKVLYCGGGNTANITKHLRRLHSDLIKETKNTQSSSKMDDETMQATASLSNPTPYEEDHHSRSSADIISERKERRGVSYVWSYVEKLSRHTIRCKLCTKVMSFHGTANVITHLQRRHNVLGEPGSQLNQIVNTKQDHIQDECETAGYNGKKFGRKSLSTASVVWKYCTRISQDQVRCCFCKKNLSYQGTSNLQRHLHRMHGVVTHGRLNKSIDEFVAMKENNFKLPTNIDFVWQFCTQEDDHRTKCNMCDSIFDTRDMDTLVKHLALEHSVETNQSIDGESKPIIMRTKKRHRHVDYDTDEDDDDYDGKWSKLDDAEDIQIQTEFDETNIKKDDSLYDDIIEEDHNNYDEEPFDPSLMQDMPTANPLSPRSSRGDTPQPQTTLNYQQPQQTLQTGNLLPPLETRVLLKLQEDRLRMETDYFREKAAYYRMQKYLTALQAKKARIELERLSRGEATFVATGDLNGAYVEVIATENHITT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -