Basic Information

Insect: Coptotermes formosanus
Gene Symbol: GLIS3
Assembly: GCA_013340265.1
Location: BLKM01012994.1:762100-801937[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.037 1.8 8.7 0.1 2 23 1338 1362 1337 1362 0.92

2 5 1.2 57 4.0 0.3 3 23 1373 1398 1371 1398 0.78

3 5 7e-06 0.00034 20.4 0.6 2 23 1405 1428 1404 1428 0.97

4 5 7.5e-05 0.0036 17.2 1.4 1 23 1434 1458 1434 1458 0.97

5 5 9.8e-05 0.0047 16.8 0.5 1 23 1464 1488 1464 1488 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.037	1.8	8.7	0.1	2	23	1338	1362	1337	1362	0.92
2	5	1.2	57	4.0	0.3	3	23	1373	1398	1371	1398	0.78
3	5	7e-06	0.00034	20.4	0.6	2	23	1405	1428	1404	1428	0.97
4	5	7.5e-05	0.0036	17.2	1.4	1	23	1434	1458	1434	1458	0.97
5	5	9.8e-05	0.0047	16.8	0.5	1	23	1464	1488	1464	1488	0.95

Sequence Information

Coding Sequence: ATGGATAGCCTGAATGGgaaacagaagacaaaagaacaTCAAGAAAACACCTACCTACCAGGGAAACTGCAACCAGCTGCTTCGGCATTTCAACTACCAACTCATGGAATAAAGAATTTTTCCACTCAAACATTCCAGCTCCCAGCATTGCTCAAACATCCGCAAGATCAAGttccaaaatataaatacgCAGAAACCCATAAACCATTTACATTGCCGTCCATACAAGAGACGAACCAACGCCCACAACAAAGCATACCTCGTTCATCGGAATCGTCTATAACCTCGACAGAGTctgcattaaataaacaacatgtACCAACACTACATACCGGCGTGAGTTTACCCTCCGTGTGCAATAGGTCGATAAAGAGGCCGATTAGTATATCGAACAGTAGTGAATCGAGCAGCGATCGCAGTGTCACTGACATCAGCAATCGAAGTACAGCAGTGCCATCTGTCCCTGTGGAAGTGACTGTATCTTCACGGATTGAAGTGAAAACTAGGTTGCCAGAAAATTTGCAAAACTCATTAGTAAAAAATGGGTCGTCGACTTCCTCATGTTCACTGCCGTCGATTGGATCACGGCAGCCTCCAAGAAAGAAACTGGAAGAAGTGTCTGGTTTCGTTGttgtcacaaaacaaaattactttaagCCCATCTGCAAGGatcagcaacagcagcaatgTAGCACATGCAGCACTGAACAGCAGAAAGCCACAGCTCACACTAGTCTGAGAAAGAAGGAAGATAATCAAGAGCAAATCAGGTCTAGAGAGACAACCAGAATATATTTTGATAGTCAAGAGGCGAAAGAAGATAAAGGTCGAGAACAGGCCGAATACAAGATAAAGCAAAGGCTTTCAAAATTACCGAGTATGAGGacgaaaacaggacaggatgaTACAGCGAaaagtattgttatttttcctgaGAACAGAACCCAGTTTCGAGCTGAATGTGGTGAGAAAGATAAAGAAGGTGCTCGAAATAGGTCAAACCAAAGTGACGATGCAGCCTCTGCGACCTACAATGACGAAGGTCTACATTCCAAAGTTTCACAAAGCAAATCGCAGGCGACGCAAGCCATGGGTCACAGAAATTTAAACGAAGAGAGAAAAAGAGATGATCTCAGCCACAGGGAAGACAAAGGAAAGCAAACAGTAGCCGAAGGATGTGTCAAAGAATTGTTTCCTTCAATTCAAAATTATCAAGTATCTTTAGAGGGAAGTAACAGCAGTTCTAACGAccatacaagacaaaaaaatacgTGCAATTTAGAGAGCACAGTTGATTTGAAGAGGCTGGAAAAAATAGAAGCTATTGAAGGCTGGATGAAGTTATACGAGAGTGAATTTTCtaatgacagaaataaagaaactcGTAATACAATAAAGAATACTGGAGCGAAGAAAGTAATGAAGCATAACGCAAATTTGGGTATTCAAGAATCAGAGAAAACTGCTTCCAATTCGATATTATCAGGAGGAAAACCAAAAAGTATGGAAACAGCTAAAGTACAAAGGTCTACAGCTTTCTTGCCCAATTATGAGGAGGCAATTGGAGCCAGACAGCGGGAATCACTCGCAGAACGGGCTGCAGAATGTTCTGGATCACATCCAAGAATTGAAAGAGCAAACAACTCGGCCAGCATTGAACGGAGCCAACAGGacttacattctttaaaatacacCGCGGCTGAAACCTTGGAAGAAACAGAATTTAACCAACAGAAATTCAGGACTACAGGCAACGAAAGGTCTATTCGAAACACATCAGCAAAAGCATATGGAACAAGAGACCAGCCTGTAAATATTGAAAGACGACAGGAAGGTTCATTTGGTCCCATTACAAATACGATGACAGAAAACGATTTTCTAGAAAACGTTTCCTTAACGCCCTTAAGTACTTTACAAAATACGAATTATTCCCCACATACAGACAATTCAAACGAAGGCGAGGCTGCAGTTGAACCGATCTGTCAGTTAGTTCGAATAGCACAGCAACAAAACGAGCAGTTCGTGGCGAGATCAGAGTTCAAGAAACCTTCAACAAGGGGAGGAACCAGTGCAACACTTGAACAAATTGAGGCAATGATTGAACCCAAGCACGAAGAACCTTCCGTAAATGAGCACAACTTCAAGGAATGTAAATCAAGAAACACAGGGGCAAAAACTAGAACAAATAGGAGGAGTGCTTTGCACAGCTTAATGCCAGATATTGTGCAGGTGAAACTGGGTATTGACAATCAGTCTAGAATACTAGATAAGTTAGACGAAATGATGAAACACAGTGGAATTATGGATCAAAGTAGGTGTAAGACAAAGGCTACAAAAGCCGCGTCGGTTCAGTGTTCAGAAGAAACCTTAGTGACCGGAAACGACATGGACAGTCCGATAGGAAAAGCGGAATTGACTTCATCCGCTCCCTTAACTTTCCCTTCAGACAATTTCCATtcgaaaattaaaagtaatggCGACAATTCAAAAATTTCCGAAAATAACGAATCCCGAAGTCGGAACCCCGTGAGCCGCGCCTGCAGTAACGTGTCAGTCTTCAAACAAATGAGTGGAGGAAGAATCATTGAAGGTAACACGCAGACTTCACGCCAGTGTCCCAGCTTACAGAAGTTTCCTGTAGCACAAAAGGACGTATTTGGATACCGAACACCAAACTCTTATCCTGTAGAGGGTAGAGCAATTCTGCAGAACATGCATGTAGACAGCGGCATGACGACAGCGCCACCACCGACGCCTTCGCCAGCAGTGTGGCATACAGCGCCACTAGGCACCAACTCCGAGCCTTACTCTATCATACACCGATCGACAGCGCCTTGCTTCGTGAACCACACGTTCCCTACATACAGTTCTCCCGTACATTCCCACGAAATGTCCACAAGTGATACTGTTGTGGTAACCAGCACGGAAACCCTGCCGCACTATTCCGCGGCCTTCCACAATCACAAACGCCACAATTACTCCATAAGCCTCATTCCAATGTCTCCGAGAATGGACACTCACGTGCCTTACACGCCAGTAAACACAGAACGTTCGGCATTTCAAGATGTTGAAGACATTAATCAAGAAGTAAAACTTGAAACCAGCGAGAATTACACCATTATTGACCTTCCTCCGGTATGCAATATGGGGAAAGATGAATATGTGGAGCATTCCAACATGCGACATGCCGATAATGGGCATACGTGTTCAATACCAGCAAGCAATACAAGAGGAAACCAATCATGTTTGGGTGACATAACCTCACTTCCTGGTGACACTGACTGTGTTTATGAGACTAACGGGCTGGGAACAATATCTGGTCAGATATCCAATGACCACGCTCTGATGTTGCCACCAATAGGGTCAATATCAGCAAAACACTTCCACGTGCAAAATGAGGCAGACATCAACCTACGAAATTTGAGCAACGCCTCTCTTAATACAAGGAGATCGTCTGCGAAGTCTGACAACGTACGGGGTGGCAGTCGCGCCTTGTCTGCGTCTCCTCTTGGGGAGGGGGTCGTGGACTTGACCAGTCTGATCAGGTGCTCACCGACAAGTCTGCTGGCCTTCAGCGGTTCCTCATGCTCTCAGGACAGCGGCCGGCCGGGAGGCTATGGTTCCTACGGCCACCTATCGGCCAGGGACTCCTGCAGTCCGCTGCCCTACCACAGCAATCAACAGGTGCAGGAAGAAGGGGCTGTCACGTGCGCGCTGGCCATGCGCTCCTTGGAGCAGACATCTTTTCACGATCTCTCGTCCAATCAAATTGTGTTGCCACAACACGAAAGCGAAATGCTGACATCCATCATGAGCAAGGTGCCGGCGTCATACACCCCAGACGCGATGGtgactgtgtgtgcagtgcGAGATGACGTCACTTCCTCGCAGCAACTGGTGACCGAATCGTCCGACCCATTTCTGGCACCGCTGGGAAATGAGGACGGCAACCAGCAACACACAAGCCCCGAGCAAACTGAGGACGACGAACCGCTAGGTGGCACTGCAATCGAATGCCGTTGGATTGATTGTTACGCAGTGTTTCCTGATCAGGAGTCGCTAGTCCACCATATTGAAAAGAGTCACGTTGAACTAAGGAAAGGTGAAGATTTCTCATGCTTCTGGCAGGGCTGTCCAAGGAGATCCCGTCCTTTCAACGCTCGCTACAAGCTGCTGATACACATGAGGGTACATTCGGGAGAGAAACCAAACAAATGCCCGTTTGAGGGGTGCACAAAGGCGTTCTCAAGACTCGAGAACCTGAAGATCCACCAGAGGTCTCACACGGGAGAGAGGCCATATTCTTGTCAGTACTCTGGCTGCACGAAGGCGTTCAGCAACAGTTCGGACCGCGCCAAACACCAACGGACACATGTGGACACCAAACCGTACGCGTGCCAGGTTCAGGGCTGTTCCAAGCGTTACACCGACCCCAGCTCACTGCGGAAGCACGTGAAGAACCACACGACCAAGGAGCAAGTGCAGGTGCGCAAGAAGATCCGCAGTGAAGATAGGAACGTACACGTGGTGCCGGACACATCACAGGGGGCAGAACAGAGCAGCGTGCACGCAGAATCTTCTGTCTCAAGAGATGCTGCTGAGTCCTCCACGCTGGACCAACTGTCAGTGAAAACATATCCAACAAGCGTGTCCTACTGTGAGAGTCAGTCCAACCACAGCACAGATTGTTCCTCTCCCACCATaccacagagacctctaccggatgATTTAGACTATCGCCTCGGCTTTTCAACAAACGAACAGGAATTTTTGGACCACGTGTTAAGAGAAGCAGAAGGACTCCAGTCATCGTCCGGCCTAGAGGAAGACATCTTGGAGTACATCCCGTTTGACTCGGTGAGAAGGCTGCTGGGGGAGCACGTGGAATACATTGATTCGGCGTTACAGGAACAGCTGGAACTGGAGTCGGACATCGAGCAACAGATCCTGGAACTGAGTAACCTTGAACAATGCTCACCGAGTCAGCTGTCAACGCTGTTCCAACATGACCAAACGTAA
Protein Sequence: MDSLNGKQKTKEHQENTYLPGKLQPAASAFQLPTHGIKNFSTQTFQLPALLKHPQDQVPKYKYAETHKPFTLPSIQETNQRPQQSIPRSSESSITSTESALNKQHVPTLHTGVSLPSVCNRSIKRPISISNSSESSSDRSVTDISNRSTAVPSVPVEVTVSSRIEVKTRLPENLQNSLVKNGSSTSSCSLPSIGSRQPPRKKLEEVSGFVVVTKQNYFKPICKDQQQQQCSTCSTEQQKATAHTSLRKKEDNQEQIRSRETTRIYFDSQEAKEDKGREQAEYKIKQRLSKLPSMRTKTGQDDTAKSIVIFPENRTQFRAECGEKDKEGARNRSNQSDDAASATYNDEGLHSKVSQSKSQATQAMGHRNLNEERKRDDLSHREDKGKQTVAEGCVKELFPSIQNYQVSLEGSNSSSNDHTRQKNTCNLESTVDLKRLEKIEAIEGWMKLYESEFSNDRNKETRNTIKNTGAKKVMKHNANLGIQESEKTASNSILSGGKPKSMETAKVQRSTAFLPNYEEAIGARQRESLAERAAECSGSHPRIERANNSASIERSQQDLHSLKYTAAETLEETEFNQQKFRTTGNERSIRNTSAKAYGTRDQPVNIERRQEGSFGPITNTMTENDFLENVSLTPLSTLQNTNYSPHTDNSNEGEAAVEPICQLVRIAQQQNEQFVARSEFKKPSTRGGTSATLEQIEAMIEPKHEEPSVNEHNFKECKSRNTGAKTRTNRRSALHSLMPDIVQVKLGIDNQSRILDKLDEMMKHSGIMDQSRCKTKATKAASVQCSEETLVTGNDMDSPIGKAELTSSAPLTFPSDNFHSKIKSNGDNSKISENNESRSRNPVSRACSNVSVFKQMSGGRIIEGNTQTSRQCPSLQKFPVAQKDVFGYRTPNSYPVEGRAILQNMHVDSGMTTAPPPTPSPAVWHTAPLGTNSEPYSIIHRSTAPCFVNHTFPTYSSPVHSHEMSTSDTVVVTSTETLPHYSAAFHNHKRHNYSISLIPMSPRMDTHVPYTPVNTERSAFQDVEDINQEVKLETSENYTIIDLPPVCNMGKDEYVEHSNMRHADNGHTCSIPASNTRGNQSCLGDITSLPGDTDCVYETNGLGTISGQISNDHALMLPPIGSISAKHFHVQNEADINLRNLSNASLNTRRSSAKSDNVRGGSRALSASPLGEGVVDLTSLIRCSPTSLLAFSGSSCSQDSGRPGGYGSYGHLSARDSCSPLPYHSNQQVQEEGAVTCALAMRSLEQTSFHDLSSNQIVLPQHESEMLTSIMSKVPASYTPDAMVTVCAVRDDVTSSQQLVTESSDPFLAPLGNEDGNQQHTSPEQTEDDEPLGGTAIECRWIDCYAVFPDQESLVHHIEKSHVELRKGEDFSCFWQGCPRRSRPFNARYKLLIHMRVHSGEKPNKCPFEGCTKAFSRLENLKIHQRSHTGERPYSCQYSGCTKAFSNSSDRAKHQRTHVDTKPYACQVQGCSKRYTDPSSLRKHVKNHTTKEQVQVRKKIRSEDRNVHVVPDTSQGAEQSSVHAESSVSRDAAESSTLDQLSVKTYPTSVSYCESQSNHSTDCSSPTIPQRPLPDDLDYRLGFSTNEQEFLDHVLREAEGLQSSSGLEEDILEYIPFDSVRRLLGEHVEYIDSALQEQLELESDIEQQILELSNLEQCSPSQLSTLFQHDQT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -