Basic Information

Insect: Coptotermes formosanus
Gene Symbol: BCL11A
Assembly: GCA_013340265.1
Location: BLKM01000560.1:1813433-2041125[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 6.3 3e+02 1.7 0.0 2 11 24 33 23 36 0.88

2 7 1.1 55 4.0 1.1 1 23 222 245 222 245 0.94

3 7 1.1e-06 5.4e-05 22.9 1.3 3 23 676 696 675 696 0.98

4 7 0.00011 0.0051 16.7 4.9 1 23 702 724 702 724 0.99

5 7 1.9e-07 9.2e-06 25.3 2.9 2 23 1099 1120 1098 1120 0.97

6 7 1.4e-05 0.00066 19.5 3.3 1 23 1126 1148 1126 1148 0.99

7 7 8.8e-05 0.0043 16.9 0.4 1 22 1156 1177 1156 1177 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	6.3	3e+02	1.7	0.0	2	11	24	33	23	36	0.88
2	7	1.1	55	4.0	1.1	1	23	222	245	222	245	0.94
3	7	1.1e-06	5.4e-05	22.9	1.3	3	23	676	696	675	696	0.98
4	7	0.00011	0.0051	16.7	4.9	1	23	702	724	702	724	0.99
5	7	1.9e-07	9.2e-06	25.3	2.9	2	23	1099	1120	1098	1120	0.97
6	7	1.4e-05	0.00066	19.5	3.3	1	23	1126	1148	1126	1148	0.99
7	7	8.8e-05	0.0043	16.9	0.4	1	22	1156	1177	1156	1177	0.97

Sequence Information

Coding Sequence: ATGCGGATTAAGATGCCAGCAGTTCGGATCGCCCAAGCGGACGCTGAAGTGGTTCATCAAGATATTCTGACATGTGGGGTGTGCCAGAAACCGTTCGCCCTCGCGGACATAGTCAAATTCATCCAGCACAAAGTGCTGGCTTGCAACAAAGAAAATTACTCTCTCGGCTTCTCCGGAGGAGACCACCGCGATGCCAACAACACGGACAGCGACGACGGAGACGGCGGTAGTGGAGGGGGCGGAAGTGGTAGTTCCTCACTTCCGGTTCCACTAAGTGTCGTCAATACCCGTCGGCCCAGCATATCAGCGCCGATAAATAGTAAAAAGGCTGTAGCTGCAGCATCGGCATCATCGTCAGCGAGTATTTCAACACCTGCAAGGATATTATGTACACCTCCACCAACTTCGCCGAGGATGCTGGGCCCGTCGGATATCCTGATGGATGAACCGCCCAGCAGCACGCCGAAACGTCGGGCTGGGAGCAGCAGCCCATCTAGTAAAGCGGATGATCTTAATCATAATATTCAGGATGAAGATCTTAAACCGAGAATCAAACAGGAGCACCTTGACACGGGGTCTTCACCGGACGAAGCCGTCGTCAAGAGGATCAGGACGGATGTGGTGGACGCCGAGTCCAACACGACGCATTCTGaACCAAGTAACTACGTGTGCTCCACATGTAAGCAAAGGCTGCACTCCGCGTGGCGTCTTGTGCAGCACGTGCAGAACAGTCATGGCATCAAGATCTACGTGGAGTcatctccttcctcttcttcgaCAGGTTCCTCTTCGTCACCGTCTACCACGTCCTCGTTGTCTGCTGCGGGGAAGAATGTAAGTGGTACCGCAAATGGCAACAACCATTCCTCGTCATCGTCTTCCTCATGCTCCGGATCGTCCACCTCTTCAGGCTGTTCCAGCTCAACCGGCGGTAGTAGCAACAATGCCCCTACCACCCCTGTGAGTGCAACACCTCTTTCTTTGCCACCACCAGGCGTGTCCTCGAGGCTGTCCCATCATCAGGCTTTACACCATCCACCACTACCGCAGCCTTCATCGCTGGTTGATCCTCATCATCCTCTTCACAGTAGTAACCCTTTTGGTGTTGGTGGTCTCCTGAGGATGCCCTTAGGAGACCGATCCCATCATCAGTTTCCTCCCACGTCAATGGCAGCACCTCTGAGCAATCATCTCAGTCACCATCACGTCGCTCCAGGAGGTGGACCCCCCAGCACTGCAGGTCTGTTCACGAGGCCATCTAGTCACCACGATCATCACTTCCGGATGGAACAGTTAGTATCAGAGCAGTTTCGTCTTAACCCTCACCATGGACTTGGGTtagctgctgctgcagctgccgCAGCCGCTGCGGCTGCAGCAGGTGGGGTTCCACCCCCTCATCCACCATTCGGTCCTCCAACTGCTGAGAGGGTGGCATCCAGTATCCCTGCGTCCGCAGGACCACCTCGTTCCTCTGCTGTTCCGCCAGCCCCCGCACTTGGTCTAGCTATGGAGCCACAACTTGACTTCTATTCACAGCGACTCCGGCAGCTGGCCGGTACCACTAGTCCGGGCGCAGCGAATGGGAACTCATCCCCTTCTCCCAGAAAACCTGTACTAACTCCACCATTCACGAGTCCACCAAGCAGTAACAGTCACCACCCTTCAGTGAGCTCTGTCGTTACTCCTATTCTActcaacaacagcagcaacaacaacaacaataataataacagcaccaccaccaccaacaacaacaacaacaataacagcagTGGCTCTGCCACCTCACATACCAGCAATAGGCCGGAGTCGCTGTCATCACCAGAGAAGCAGTCTCCACTCTCAGATCCAGTGAACAGCTCTGCTGTAGCACTCACTTCAACACCGAGATCTGCATCAACCCCACCAACTAATTTAAAACAGTCAGATTTCTCTCGAAGTCAGACTTCACTGTCAGGGACAACAGAGGCTGGCGGTGGCGGTGATGGAGGAGGGGGTGAAAGGGAGGAGCGGATTAGAGCTTGCGAGTTCTGCGGGAAGAAGTTTCGTTTTCAGAGCAATCTGATCGTCCACCGCAGAACCCACACCGGAGAGAAACCTTATAAGTGTGCCGTATGCAGCCACGCTTGCACGCAGAGTTCCAAGCTGAAGAGACACATGAAGATTCATCGCCGTGCACTGAGGACGGGAAACGGGCAGGCCGGTGGCGAGGCGGGGACTACCAATGGGGGAAGTACCAACTCGACACCGGATAACATTTCACGTACTGGCTCGGTTGAAACTctggatgatgatggtgatgatgaggatgacgatgatgaggaagaagaggaggatgatgaggaagaggaggaggaaatggagcttgaagaagaggaaggagatgacgatgacgacgatgatgatctTGGTGGAGATGCTCCTGAAGATCTCACTACCAAGTCAACATCATCAACCCCACCTAACAACGTGTCAGGAGATGCAAACAAAGCTAACAACAGCACCCCTCGACCCACTCCAACGCCAACTCCTCTTGAGAAAATTACTACTTCAGGTTCCTTAGTTGGTGAGTTGATGGACAAATTTGGGCTAAGCAACATCCAGCAATACAATGACGCATACAAACAAGCACTGCAGGAATCTGTCGTTGGATCACACCAAGTACACATCAACAACAAAGAGGACCGCCATAGATCGCCCCTTATATCTGACAACAACAATGGCGGGGGTAAAACATCACCTGCGATCACTAAAAGTACTCTTGAGAATGGAATTCTGGATAAATCAGCTGCAGCTATGCGGTTTCGCGAAGAATTTGCAAGAAATATAATAGCTGCTGGTCAACCTCCTTTAGATTTGATCGGTGCACCTCACGGTCTGTTCGGAACCAGCACGACTTTCGAAAACCCTTTTGATGCTGCTAATAAGCGCTTGAAGCTTGACCTGGaaaatcatcataatcaccattCAGCAAACCAGGGTCGAGGTGGAAATCCAAATGCTGATCGGGATGGTCTGTATGCAGGTCTGTGGTTACCAGCCATGGCTGCAGCTCACCACAGGGATCATCTGTTTGGCGCTGACACTCCAACCATGGACCTCCTCAGTTCTCGTTCCTCAAAGTCAGCAGAAAGTGCTCTACTGAAAGCAAGTGGTGGAGGTTCAAAAGCAGGACCCAGCGCATCATCTCtagcagctgcagcagctgcAGCTGCTGCATTAAACCTTGGTTTATCTGGAGGACCAGGATCTCAGCAGCAACATTTGAAGAAGGAGAATAGGCGCAATGATACTTGCGAATACTGTGGGAAGGTGtttaaaaactgcagtaatcTTACAGTGCACCGCCGATCCCACACGGGTGAGAAACCATACAAGTGTGAACTGTGCTCTTATGCATGCGCTCAAAGTTCAAAGCTGACTCGCCATATGAAAACTCATGGCAGGCTTGGCAAAGATGTGTATAGGTGTCGATTCTGCGAGATGCCTTTCTCCGTGCCATCTACGTTGGAGAAGCACATGAGGAAGTGTGTTGTGAATCAGAATAACAAGGCTGGAGGTGGACACATCCTTCCAGCACTCATCAGTGGTGGAGAGGACACTGGAGACTCCAGTGCATCAGCGTCCAAGGACACCACATGA
Protein Sequence: MRIKMPAVRIAQADAEVVHQDILTCGVCQKPFALADIVKFIQHKVLACNKENYSLGFSGGDHRDANNTDSDDGDGGSGGGGSGSSSLPVPLSVVNTRRPSISAPINSKKAVAAASASSSASISTPARILCTPPPTSPRMLGPSDILMDEPPSSTPKRRAGSSSPSSKADDLNHNIQDEDLKPRIKQEHLDTGSSPDEAVVKRIRTDVVDAESNTTHSEPSNYVCSTCKQRLHSAWRLVQHVQNSHGIKIYVESSPSSSSTGSSSSPSTTSSLSAAGKNVSGTANGNNHSSSSSSSCSGSSTSSGCSSSTGGSSNNAPTTPVSATPLSLPPPGVSSRLSHHQALHHPPLPQPSSLVDPHHPLHSSNPFGVGGLLRMPLGDRSHHQFPPTSMAAPLSNHLSHHHVAPGGGPPSTAGLFTRPSSHHDHHFRMEQLVSEQFRLNPHHGLGLAAAAAAAAAAAAAGGVPPPHPPFGPPTAERVASSIPASAGPPRSSAVPPAPALGLAMEPQLDFYSQRLRQLAGTTSPGAANGNSSPSPRKPVLTPPFTSPPSSNSHHPSVSSVVTPILLNNSSNNNNNNNNSTTTTNNNNNNNSSGSATSHTSNRPESLSSPEKQSPLSDPVNSSAVALTSTPRSASTPPTNLKQSDFSRSQTSLSGTTEAGGGGDGGGGEREERIRACEFCGKKFRFQSNLIVHRRTHTGEKPYKCAVCSHACTQSSKLKRHMKIHRRALRTGNGQAGGEAGTTNGGSTNSTPDNISRTGSVETLDDDGDDEDDDDEEEEEDDEEEEEEMELEEEEGDDDDDDDDLGGDAPEDLTTKSTSSTPPNNVSGDANKANNSTPRPTPTPTPLEKITTSGSLVGELMDKFGLSNIQQYNDAYKQALQESVVGSHQVHINNKEDRHRSPLISDNNNGGGKTSPAITKSTLENGILDKSAAAMRFREEFARNIIAAGQPPLDLIGAPHGLFGTSTTFENPFDAANKRLKLDLENHHNHHSANQGRGGNPNADRDGLYAGLWLPAMAAAHHRDHLFGADTPTMDLLSSRSSKSAESALLKASGGGSKAGPSASSLAAAAAAAAALNLGLSGGPGSQQQHLKKENRRNDTCEYCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQNNKAGGGHILPALISGGEDTGDSSASASKDTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01289286; iTF_00396809; iTF_01567379;
90% Identity: iTF_00396809;
80% Identity: -