Basic Information

Insect: Coptotermes formosanus
Gene Symbol: Prdm15
Assembly: GCA_013340265.1
Location: BLKM01000301.1:94998-121576[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.014 0.67 10.0 2.7 2 23 266 288 265 288 0.91

2 18 7.2e-05 0.0035 17.2 3.3 1 23 698 720 698 720 0.98

3 18 0.26 13 6.0 0.6 1 19 724 742 724 744 0.95

4 18 0.00061 0.03 14.3 1.8 2 23 759 780 759 780 0.97

5 18 0.08 3.9 7.6 2.9 2 21 785 804 784 805 0.93

6 18 0.00071 0.034 14.1 4.8 1 23 812 834 812 834 0.99

7 18 0.72 35 4.6 0.1 1 20 838 857 838 859 0.89

8 18 0.021 1 9.5 1.8 2 23 873 894 872 894 0.94

9 18 1.6 76 3.6 1.2 1 15 898 912 898 918 0.80

10 18 0.0008 0.038 13.9 0.5 2 23 924 945 923 945 0.96

11 18 4.1 2e+02 2.3 8.7 1 20 950 969 950 971 0.93

12 18 0.0038 0.18 11.8 0.1 2 23 1024 1045 1023 1045 0.96

13 18 0.00013 0.0061 16.5 1.2 1 23 1050 1072 1050 1072 0.97

14 18 0.00067 0.032 14.2 1.8 2 23 1078 1099 1077 1099 0.96

15 18 9.5e-06 0.00046 20.0 0.5 1 23 1105 1127 1105 1127 0.95

16 18 2.1e-05 0.001 18.9 2.6 2 23 1136 1157 1135 1157 0.96

17 18 0.008 0.39 10.8 5.5 3 23 1165 1186 1163 1186 0.95

18 18 0.003 0.14 12.1 1.8 1 23 1191 1214 1191 1214 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.014	0.67	10.0	2.7	2	23	266	288	265	288	0.91
2	18	7.2e-05	0.0035	17.2	3.3	1	23	698	720	698	720	0.98
3	18	0.26	13	6.0	0.6	1	19	724	742	724	744	0.95
4	18	0.00061	0.03	14.3	1.8	2	23	759	780	759	780	0.97
5	18	0.08	3.9	7.6	2.9	2	21	785	804	784	805	0.93
6	18	0.00071	0.034	14.1	4.8	1	23	812	834	812	834	0.99
7	18	0.72	35	4.6	0.1	1	20	838	857	838	859	0.89
8	18	0.021	1	9.5	1.8	2	23	873	894	872	894	0.94
9	18	1.6	76	3.6	1.2	1	15	898	912	898	918	0.80
10	18	0.0008	0.038	13.9	0.5	2	23	924	945	923	945	0.96
11	18	4.1	2e+02	2.3	8.7	1	20	950	969	950	971	0.93
12	18	0.0038	0.18	11.8	0.1	2	23	1024	1045	1023	1045	0.96
13	18	0.00013	0.0061	16.5	1.2	1	23	1050	1072	1050	1072	0.97
14	18	0.00067	0.032	14.2	1.8	2	23	1078	1099	1077	1099	0.96
15	18	9.5e-06	0.00046	20.0	0.5	1	23	1105	1127	1105	1127	0.95
16	18	2.1e-05	0.001	18.9	2.6	2	23	1136	1157	1135	1157	0.96
17	18	0.008	0.39	10.8	5.5	3	23	1165	1186	1163	1186	0.95
18	18	0.003	0.14	12.1	1.8	1	23	1191	1214	1191	1214	0.95

Sequence Information

Coding Sequence: ATGCAGAAATCGCTTCTTGCAGGTTGCAATGTTTGCGGTCGAAACCACACCACAGAATCGTGTTCATTTCTTCGAGAGCTTAAACCCattgAGGATACAAAGACTCCATCTCGAGCCAGATTGACCTTGCCTGCTAATTTAGAAGTACAGAATTTGGCAGACCATTCTACAACTGTTATAGCAAGAGCACCATTTGTACGAAGTGTTCAGTTTGGACCATTTATAGCCAGACGTACTCAAATGTTGCATCCTGCTGTCAACTTCCCATTAAAGGTTTTTGGTAAAACTGAAGAAACTAGTTGCTATTTGGATACAAGTGATGAGGAGGCTTGCAACTGGATGTGTCTTGTCGCACCAGCGACACATTGCAAAGAACAAAATCTTATCTGTTATCAGATGGGCCAGGATATTTATTATACTGTAATGAAAGATATCCAACCTGGTGAGCAACTGAGAGTGTGGTATGCGCCGTACTATGCCGTTAAGATGGGAGCAGTGCCTTTTAATATAGATTTAACTGCAGGTGCAAATAGAGACAAGACCACTGACCATGTGTACGAGTCAAAACAGAAGCtcaaagagaaagaaaagaagaatttcCATGGGATGTTGCTAAGTCGTGAAGTGACACAGAAATTGGCAGAGCAGTTGCCGGCCAGGCAGCTTGGAGCAAGACAGGTGCCTGACAAGTGGCGCTGTAAACTTTGCTGTGCTCAGGAGACCAGTGTTGTATCCTTTGCTAAACACTTGATGTCCCATTACAAGCGATCTTTCGGTCATTTAGAAAGattactggaatgccatctatGTCACCAGAAGTTTGCTACTGAAAAGTTGTTGGTTAAACACAAAGTTGTTCGACACAGAATGGTACTTCAGCGGCCACGTTTACTAGGAAATATAGACGAAGATGAATCGACAGGAGTGGACACAGCTGAGGAAGCAGATGATGTACCTGAAGAAAATAACGGCAGAGCGATGAGCATTGTGATCGCGAATCTGATGGGGCAAGTACCGTCACAGATCTCTCAGCCTGGTTCACAgacaatttttgttacaaacacGGGACAAATATTAACAGACCCTGCGAGTGACTGTGAGCTGCAGGAGCAGCATCACAAAGCTCTGAATGTACTTCTGGACCAGTTACAATCTGCTGACTCATACAGAGACTCCAGTGACGAGCAGTTCGGTCCAGAAGAAGCTGGTTGCTCTGCCAGTAGCACTCTTGAGAAGACAGGTAATTCAAAAATATCTGCCAAAATGCAAAATAGAAAGAATATCCTTAAAACTGGAACACAGGAGAATCTTTTCACAGAAGATGGCTTGCCAGAAAAAGGTACTTCCCTCATGGTTACTGGTACTGATATGACAACTCAGTTTGAGTCaatggaggaagaagaagatgaagaaacaGGATCAGATGGCATTTTGGCAGGGTATAAACCTGACAGTGTTACAGGTTTGGCCCTTAATCCTCAGCATAATAACACAGAcaatgttataaatattacaaacacacacgtaACAATAATTAGAGATGGTAGTATGACAAGCAGTGAAAAACGGTCAAAATCTGCTCATGTTGACAGTGCAATGAACATGTTGACAGCAGAAGCAACAGTAGATAAACCTGAGGTTCATGGTAGTATATTTGAAGAATTTCAGACCAGTGATGTTTTGTCAGAAGAAATGCTTGGTAAAACATGCACAGAAAACATACGCAACTCAGTGGAAGAGGAAAATGGGGTTCAGAATTGTGCATCTGTGAATCCACCAGTAGGAGGCACTGATATAATTAACAGTAATAATGAAGACTGTGTAATTAATACGGGAGACATGGAAGGGGTTGCTGCATCGAGTGAACTGAGATTGTCAGTGGAACACGAAGATGTTACATCTGCATTCTTAGAATTAGTTGCAGAACCAAATTTTGATGCAGCTGATGCTCAGGATGTGAATAAAAATGCAAGAATTGCCAAGGAACATGATGGCATTTCATTGGCagccaattttaattttgatgctgTTTCACAGGATGCAGCCTTACTACCTTCAGATAATACCAAAATAATGGATGTGGGACCTCCGTACAATTGTGACATTTGTAATAAAGAATTTCACAAGGCTGATTATTTATATCGTCACTTACGCAAGCACACTGGTGAATTTACATGTGTCTCATGTTTAGCTGTGTTTGCTCGTAAAGAAAGCCTCATGAACCATTCGTGCTTTGTGGATGCTTCAGGAACAAATGAAGATGCTGCCTCGCGTACGTGTCCGTACTGCCAGAAGAAGTTTCTTGTTAAGAAGCTTCTTAAAAGGCATATGGCAAAACATACAGGTGAGTGGAAGTGTAACAGCTGCCAGCGATTCTATTCATCAAAAGGTACTTTGTCTTCCCATCGGTGTTCAAGGAAGCCACGTGTGATATATCAGTGTCATGTATGTAAAAGACAGTTCCTTAGACGCAGCTACTTGGACAAACACATGCGTCTTCATTTAGAGAGTCACCCATGTCCCTCGTGTGGCAAGAGGCTGCAGTCTGGGGAAGTTCTACAAAACCATCAGCTGTACTGTGCAAGGggAAAACAGCTGGAGACAGTTGGCGAGACAACATGCCCCCATTGCAGTGTTGCTTTCTCACACCTTGTTGCATACAGGCAACACGTGTATCAACATATATACCCTTACGTCTGCAAACGGTGTGAGGAGCGATTCAAAACAGATGCAGGCAGGGCTTCACATACTTGTGCGGAAAGTGAAGTGAGCTGTGAAATGTGCACGAAGCAGTTTTCCTCATTGCTCAGTCTGTCCAGGCACCAAATAATACACGGTGTGCCACAGTTCCATTGCTATGAGTGCGGTCGGAGTTTCCACCACTGTGAAAGTTACGCTTCTCACAAATGTGCTAAAGGAGAAACTCGACTGTCACAGAAGGACCGGAAAAGAGCTGCTTATAGTAGAAATGAAGACGGCAGACATATGTCAACAGAAGGGGGTGGGAAAGATGAGAACGTCAGTGGAGAGTCAGTACCAAAGAAGAAAAGTAGCAAGTCAGGAGGCTTGGTATGTGATGTCTGTGGAGAAGTGTATAAGACTATCCATATTCTCAAAGCACACATGCAGTTGCATGGGGAGCGCAAGTATGCCTGTGAAATTTGCAACAAGAAGTTTCATCGTAAAGACGTGCTGCAGGAACATCTTTCAGTTCATCAGGAGGCACAGATACCTTGCCCTTTGTGCAACAAGAAGTTGAAAACAAAGAAATCTCTAGATGTCCACATGCACCGTCATACAGGCATCAGACGTTATTCGTGTACAGACTGCGGCAAGCAATTTTTCCAGAAAGGCAACTTGCTAAAACATGCTGTGGTGCATAATCCAAATGCCAAAGTGATCCTGACGTGTGACCATTGTAATAAGAATTTCACGTCAAGGGACTACCTATCTCAGCACATGCTAGAGCACACACAGGGTCGTATTCATTTATGTCATCTCTGTGACAAAGGATTTGTGAAGGAACACATGTTGAAGGGTCACATCAGAAAATTTCATGGTGGGCACATATTTGTATGCCCATATTGTAATATGTCTGTTCGCCATCGAAATTCAATTCGACGTCACCTTGAAAATCGTCACAGTGAACTCTATCAGGAATGGGCAACTCCAGGTTTCCTTGATAAACTTGAAGCAGGCAGTAATGTAACTTCATCAAACACATTTATAAACACTACTCTAGCAGGTCTACACCATCAGCTGTCAAGTGATCGCAACACAACGATAGTGACGTCACAGACTTCAGAGCATATCAGTCCTAGTTCTAATGTCAGTGTGCTTCAGACAGACAATCAGACTGAAGGGGCAGAAATACTGTTGACAGTGTCAGGAGTACCTCTTGATAGTACAGATTGTGAAGCACACCAAGCAGTAGAACAGAGTGCCGTCACTGGCCGAATGGAGCTGCAGGTGCAGGGTGAGATACAGGGCGATGAAGTAATGGCAGGTAATACATTCATTTTCTCAGATGGGACAGTTGTTCAGCAAGAGGATGGAACCAGTGGAGgagatatttttctgtatgttctTGACCCTGCAGATGTCGCCATTGATCCTGAATACTAA
Protein Sequence: MQKSLLAGCNVCGRNHTTESCSFLRELKPIEDTKTPSRARLTLPANLEVQNLADHSTTVIARAPFVRSVQFGPFIARRTQMLHPAVNFPLKVFGKTEETSCYLDTSDEEACNWMCLVAPATHCKEQNLICYQMGQDIYYTVMKDIQPGEQLRVWYAPYYAVKMGAVPFNIDLTAGANRDKTTDHVYESKQKLKEKEKKNFHGMLLSREVTQKLAEQLPARQLGARQVPDKWRCKLCCAQETSVVSFAKHLMSHYKRSFGHLERLLECHLCHQKFATEKLLVKHKVVRHRMVLQRPRLLGNIDEDESTGVDTAEEADDVPEENNGRAMSIVIANLMGQVPSQISQPGSQTIFVTNTGQILTDPASDCELQEQHHKALNVLLDQLQSADSYRDSSDEQFGPEEAGCSASSTLEKTGNSKISAKMQNRKNILKTGTQENLFTEDGLPEKGTSLMVTGTDMTTQFESMEEEEDEETGSDGILAGYKPDSVTGLALNPQHNNTDNVINITNTHVTIIRDGSMTSSEKRSKSAHVDSAMNMLTAEATVDKPEVHGSIFEEFQTSDVLSEEMLGKTCTENIRNSVEEENGVQNCASVNPPVGGTDIINSNNEDCVINTGDMEGVAASSELRLSVEHEDVTSAFLELVAEPNFDAADAQDVNKNARIAKEHDGISLAANFNFDAVSQDAALLPSDNTKIMDVGPPYNCDICNKEFHKADYLYRHLRKHTGEFTCVSCLAVFARKESLMNHSCFVDASGTNEDAASRTCPYCQKKFLVKKLLKRHMAKHTGEWKCNSCQRFYSSKGTLSSHRCSRKPRVIYQCHVCKRQFLRRSYLDKHMRLHLESHPCPSCGKRLQSGEVLQNHQLYCARGKQLETVGETTCPHCSVAFSHLVAYRQHVYQHIYPYVCKRCEERFKTDAGRASHTCAESEVSCEMCTKQFSSLLSLSRHQIIHGVPQFHCYECGRSFHHCESYASHKCAKGETRLSQKDRKRAAYSRNEDGRHMSTEGGGKDENVSGESVPKKKSSKSGGLVCDVCGEVYKTIHILKAHMQLHGERKYACEICNKKFHRKDVLQEHLSVHQEAQIPCPLCNKKLKTKKSLDVHMHRHTGIRRYSCTDCGKQFFQKGNLLKHAVVHNPNAKVILTCDHCNKNFTSRDYLSQHMLEHTQGRIHLCHLCDKGFVKEHMLKGHIRKFHGGHIFVCPYCNMSVRHRNSIRRHLENRHSELYQEWATPGFLDKLEAGSNVTSSNTFINTTLAGLHHQLSSDRNTTIVTSQTSEHISPSSNVSVLQTDNQTEGAEILLTVSGVPLDSTDCEAHQAVEQSAVTGRMELQVQGEIQGDEVMAGNTFIFSDGTVVQQEDGTSGGDIFLYVLDPADVAIDPEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -