Basic Information

Insect: Coptotermes formosanus
Gene Symbol: ZEB1
Assembly: GCA_013340265.1
Location: BLKM01000537.1:95062-114802[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.92 44 4.3 4.5 1 23 162 185 162 185 0.93

2 25 0.01 0.48 10.5 1.9 2 23 194 216 194 216 0.93

3 25 0.21 10 6.3 0.5 3 23 225 245 223 245 0.96

4 25 3.3 1.6e+02 2.6 6.3 1 23 249 271 249 271 0.96

5 25 0.00035 0.017 15.1 2.4 1 23 278 300 278 300 0.98

6 25 0.19 9.3 6.5 0.1 2 23 304 325 303 325 0.96

7 25 0.072 3.5 7.8 0.1 2 23 403 425 402 425 0.96

8 25 0.0082 0.4 10.8 1.4 2 23 430 451 429 451 0.95

9 25 0.35 17 5.6 2.8 2 15 470 483 469 492 0.82

10 25 1.6 76 3.6 6.0 1 23 501 523 501 523 0.96

11 25 0.03 1.5 9.0 0.2 2 23 531 552 530 552 0.95

12 25 0.037 1.8 8.7 1.4 3 23 558 578 557 578 0.96

13 25 0.0042 0.21 11.7 0.9 1 23 587 609 587 609 0.99

14 25 1.1e-05 0.00053 19.8 1.7 1 23 615 638 615 638 0.98

15 25 0.0011 0.054 13.5 1.4 1 23 646 669 646 669 0.95

16 25 0.0013 0.064 13.2 0.2 1 23 675 698 675 698 0.95

17 25 5.7 2.8e+02 1.8 0.4 1 23 918 941 918 941 0.88

18 25 6.1e-05 0.0029 17.5 2.8 1 23 1127 1149 1127 1149 0.98

19 25 7.7e-06 0.00037 20.3 4.3 3 23 1157 1177 1155 1177 0.98

20 25 0.013 0.61 10.2 1.7 1 23 1183 1205 1183 1205 0.97

21 25 0.00033 0.016 15.2 0.9 1 23 1211 1233 1211 1233 0.97

22 25 0.00013 0.006 16.5 0.2 1 23 1239 1262 1239 1262 0.86

23 25 0.016 0.78 9.8 2.7 1 23 1271 1293 1271 1293 0.92

24 25 0.00016 0.0076 16.2 0.9 1 23 1299 1321 1299 1321 0.98

25 25 0.00047 0.022 14.7 0.3 2 23 1329 1351 1328 1351 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.92	44	4.3	4.5	1	23	162	185	162	185	0.93
2	25	0.01	0.48	10.5	1.9	2	23	194	216	194	216	0.93
3	25	0.21	10	6.3	0.5	3	23	225	245	223	245	0.96
4	25	3.3	1.6e+02	2.6	6.3	1	23	249	271	249	271	0.96
5	25	0.00035	0.017	15.1	2.4	1	23	278	300	278	300	0.98
6	25	0.19	9.3	6.5	0.1	2	23	304	325	303	325	0.96
7	25	0.072	3.5	7.8	0.1	2	23	403	425	402	425	0.96
8	25	0.0082	0.4	10.8	1.4	2	23	430	451	429	451	0.95
9	25	0.35	17	5.6	2.8	2	15	470	483	469	492	0.82
10	25	1.6	76	3.6	6.0	1	23	501	523	501	523	0.96
11	25	0.03	1.5	9.0	0.2	2	23	531	552	530	552	0.95
12	25	0.037	1.8	8.7	1.4	3	23	558	578	557	578	0.96
13	25	0.0042	0.21	11.7	0.9	1	23	587	609	587	609	0.99
14	25	1.1e-05	0.00053	19.8	1.7	1	23	615	638	615	638	0.98
15	25	0.0011	0.054	13.5	1.4	1	23	646	669	646	669	0.95
16	25	0.0013	0.064	13.2	0.2	1	23	675	698	675	698	0.95
17	25	5.7	2.8e+02	1.8	0.4	1	23	918	941	918	941	0.88
18	25	6.1e-05	0.0029	17.5	2.8	1	23	1127	1149	1127	1149	0.98
19	25	7.7e-06	0.00037	20.3	4.3	3	23	1157	1177	1155	1177	0.98
20	25	0.013	0.61	10.2	1.7	1	23	1183	1205	1183	1205	0.97
21	25	0.00033	0.016	15.2	0.9	1	23	1211	1233	1211	1233	0.97
22	25	0.00013	0.006	16.5	0.2	1	23	1239	1262	1239	1262	0.86
23	25	0.016	0.78	9.8	2.7	1	23	1271	1293	1271	1293	0.92
24	25	0.00016	0.0076	16.2	0.9	1	23	1299	1321	1299	1321	0.98
25	25	0.00047	0.022	14.7	0.3	2	23	1329	1351	1328	1351	0.92

Sequence Information

Coding Sequence: ATGATCGCAAAGTCTCGTGTTGAGTCAGACGTTGTTCTGCTTAGTGGTTCACCaactaacatttttaacaaagagGTACCAACATTAATTTTGAGGACTCCGCAAGAGACGTTAGGTGCGCAGGCACAGCATGTTCAGTTACAACCAAATTTAGACTTCTATTCAATTGTCCTTGAAAGTGAGTTGTTAGGCCCAACCCTACAGGCGGGAAAGAATAGTGAACCCAGTGAGAACAATGATTCCAGTGACATGCTGTCTGAACAAACCACGAGCAGTACCAGGCCAGTGACCCACATTGAAATTATAAGACAGAAGCCAAATTCAGTGAAAACAAAGCATGCTGCATCCCGTCGTGTTACTGGTGCAAACCGAGTGGTACCACTGCTTACAAGCATGTGGCAGAAACGAGAGCTTAAAGGCATTGAACCATCTCTAGCAGAAACTTACAGAACAATTTTAGATAATCCAGACAACACTCATGAACATGAATGTGAGTCATGCCACAAGCAGTTTATTTCAGTGACACAGGTGGAGCACCACTTTAAGGAAGTGCACCCTCAGCAGCAGTTGGTGTTAGAACAGtgctttGTATGCAGGAAGAAATATGTCCTCCAGTCCCAGCTGAAGCATCACCTATCAGCAGTTCATGGAATTCAGTACCCAGAAAtgatatgtaaaatatgtttcatggaATTCAACACAGTGATGGAACAGAAGGCACATGAACGcaaacatgacaaaatatattcCTGCCAGTACTGCTCCACCAAGTTTGCATCATTATACTTTTGCCAGAAGCACTATGACAAGCACCTGGCTGACATGAAACCATATCAGTGCGTGTCCTGTGGGAAGAGATTCCAGAATAGCATTTCACTGAACATCCATCACAATCGGCACAAGCATCTGAAATGCTTGGTTTGTGACACATTATTTGTAGATGAACTTGAATTGTTGATGCACGTAAGGGATCATGGAGTCCAAAGTAAACACCAGTTCTTGGCCGCAGTTGAGGACCTGGACCAGGAGGAGACACAGCTTGAAGACATGCTTTGTGCCTACTTAAAAATATGCACAGAAAGTCGTGCAACAGAAGGCATAAGTAAAgATGTAAGTGACTGTGTGGAAGGCCTCCTGTGTTCAGTCTCCCAGGCACTGGATGCTGAGCTTTTGGTACCAGAACCACCAGCAGACAAGAGGGGAATGGAATGTAAGCTGTGTGGACTTGAGGTTCAATCACCGACAGAATTGGTGGAGCATCGGCGCAACAAACACATGCGCAGCTGCACGTGTTTGGTCTGTGGTAAGAGAAGCCGGTCTGTCAGCCAGACATGGCGACACATAGCCACTCATGTCGATAAGGTGAAGTCTAACGAAATGGTATATGTCATCAATAAGAGTCAGCAGCAGTGCCATGTGTGTCACAAGATGTTCCCATCAAAAGGGAAGAAGAATTTCCACTTGGAACATGTGCACAAGATTGAGACCATCCAGCGCCCTCACAGCTGTACAGTTTGTTTGAGAAAATTCCAGCACAAGACATCAAGAGACAGACACATGCTGCTGCATGGGAAGGACAAGAATGGCCTGAAGTGTTCGGTGTGCAGCCAGGTGTTTCTGCGACCCAAGTTCCTGGTAAGGCACATCGCAGAGCACAAGTCCCACAATGCGTGTCGTGTGTGCAACAAAACGTTCTTGAAGCGCAGACAACTCAGACTTCACCTGAATGGTCACAGCCGTGTTGTGTTTGGGAAGAAGTATAAATGCTCACTGTGCTCGGTAACCTGTCAGGGTGCATCAGGCCTGCGGGAACACCAGCGGATCCACACTGGTGAGCGCCCCTTCAGCTGCAGCCAGTGTGAAAGGAGGTTCAAACGCCTGCAGGCCCTAAAGAAGCACATCAACACTGTGCACTCCGGCCCTGGTGCAGTGACTCATACCTGTGCCAGCTGTCCAATGACATTCAATAATCGGGGTAACCTGCTACGCCATTTTTTGCGCATCCATCGTGGGCTACGTCGCTTTATATGTGGGCTGTGTGGTGCTCGCTATGGACAAAACCAGGACTTGCGACGGCACCTCAAGGCAAAACACCAAGTGGACATGCCAGTCATTTCATGTATGGACAAGAAAGCTGTCAGTGAGatttaTGTCCTGCCACCTATTGATAAAATCCCTGAGTCACATCCACATGCGGAAAAGATAAACAGACTTGTAGCTGAAGAAAAGAGCAAGCTTGAGGATGTAGGTGATATGGTGAATAAGACTGATGTAGCAACAAGGTGTATACAACCAGAGGATCTTGCATCTCAGCACAATAGTGTCATTGACGGGACGTCAGTTCAGACAAAGCATTTGATTGCCAAAGAAAATGTAGCTGCATACACAGAAAATCCAGGTGCTGACAGTGGGATAGGTATGACATGTTCAACTATGATGGATCTTGGCTCTGGTGGTAAATCCAAGCATCCTGCAACCCCTTCATTGAATATTCAGATACAAGATAGAGGTTTGGAGGAACAGCAGCAAATATCAGACATAAAAACAGGGAGTTTTGTACCACTAGATGGGGGTGTACCATGCCCATTTAACAGCATTATGAAAATTCAGACATGTAGCCAATGCCACAGGCTGTTGTGCAGGGAGACAGTGACAAAAGGTAGTTCCGAAAACATTGAGGCCATTTGCAAGAAGTGTATGGGCAACAGTTTGGATTCAGATAGCAGCACAACTGAGAAAGTTGTAACCTTATATCGGTGTGGTATGTGTTTCATGGACTTCTTTGAAAAGAACATTCTGGCAACACACATGGACGAAAACCATAAGGTGCCTGCTGAACCAGTCTTCGATATAGTGACAAAAAACTCTGCAGGCACCATATCAAACACACATACTGCTATTAGCAGTCAGAGTCGTGGTCCTTCCATGTCAACCAGCACAGAAATGCTGTGTCCACCAGAAAACGTTCTTCTGCAGAATATTGTTCTACAGCTGAGGCCAGCACTTGAGACGCTACCTCTGACATTCACTAGTCCAAACATTCTCATGAATCCTGCACCTGTGTTCACACTTCAGCCATCGAATGTTCCAGGAATGCTGACAACTTCATCTCAGACTTCAACAGTTGTGGCTCCAAAGAACTTCGTGTCCACCCCTAAATTGTTACTGCAGTCCCCTGCAGAAGTGTTAGCTGACACAGGAAGAGTCCTGGTACTGGAACCCGTTTCTAAAGTGGCTATACCGAAGCTGCACTCGATGAATAAAGCCACCAGTGACAGCATAGCACTCCGAGAGGAGAGTCCTGTTCAGAAGACGGGAGTCAGGAACTCTAGTTGTGAATCACCAAAATGCACAGAGAAACAGCCGGTTGTGTCAGAGTATGACTGCAAGCAGTGTGGCAAGAGGTTCTTCAACAGCACAAGGTTGGAGCGGCATGAGAAGACACATGCGGGTGAACGACCCTTTGGCTGTGCTCAGTGTGGGAAACATTTCTCAGAGAAGCACAACCTCAAGGTGCACATGCGAACACATACTGGAGAGCGCCCGTACACATGTACAGAATGCGGCAAGCAAATGAGGTACCAGAAAGATTTTGCCGATCACAAGAAGCTGCACATGGGTGTGAAGCCATTCAAGTGCACTGAGTGTGGCCAGCAGTTTCTCCGACAGAGGGAACTCAAACGGCACGAGATAATTCACACTGGAGAAAAGAAGTTCAAGTGCCCCATCTGTGATAAAGCCTTCGCCCGTCTGGATCAACTGAAACTTGTGCACATGCGCCAACATGAGACCACACCAGAGCCCTATCCCTTTAGTTGCATTACTTGCCATAAAAGGTTCAAGGTCAAGGCGAAGTTGGAACAGCATCAGATCCTGCACTCAGGCCTGAAGAACCATTACTGCCCAATCTGCAATAAAGCTTTTGCATTGGATGTGTATTTGAAATCACACCTTAAGACACACAAGAAGCAGGATGGCTACATTCGGTGCCCCAAGTGTCCTCGTAGATTTGCTTCTGAAGACACACTGCAGGTTCACAATGAGAAGTTTCATGTGAGACTGCACAGAAATGCAAAGGAAACCAGACAGggaaacaagaaaaaacagaaaaaattcacTGTACTCCCAGACACAACTATGCTAGAACCTGAAATAGACATCACAGACATGGAAGAAATGGAGGGAGTCAACCTGCTGGAGGAGGAAGATGACATACTGTCTGACAACAAGTGTGACACTGTCATCTACCTGCAGATGGTGCCTGACCTTGACTTGTCTCTTAATGGTGACATGTCACAATAA
Protein Sequence: MIAKSRVESDVVLLSGSPTNIFNKEVPTLILRTPQETLGAQAQHVQLQPNLDFYSIVLESELLGPTLQAGKNSEPSENNDSSDMLSEQTTSSTRPVTHIEIIRQKPNSVKTKHAASRRVTGANRVVPLLTSMWQKRELKGIEPSLAETYRTILDNPDNTHEHECESCHKQFISVTQVEHHFKEVHPQQQLVLEQCFVCRKKYVLQSQLKHHLSAVHGIQYPEMICKICFMEFNTVMEQKAHERKHDKIYSCQYCSTKFASLYFCQKHYDKHLADMKPYQCVSCGKRFQNSISLNIHHNRHKHLKCLVCDTLFVDELELLMHVRDHGVQSKHQFLAAVEDLDQEETQLEDMLCAYLKICTESRATEGISKDVSDCVEGLLCSVSQALDAELLVPEPPADKRGMECKLCGLEVQSPTELVEHRRNKHMRSCTCLVCGKRSRSVSQTWRHIATHVDKVKSNEMVYVINKSQQQCHVCHKMFPSKGKKNFHLEHVHKIETIQRPHSCTVCLRKFQHKTSRDRHMLLHGKDKNGLKCSVCSQVFLRPKFLVRHIAEHKSHNACRVCNKTFLKRRQLRLHLNGHSRVVFGKKYKCSLCSVTCQGASGLREHQRIHTGERPFSCSQCERRFKRLQALKKHINTVHSGPGAVTHTCASCPMTFNNRGNLLRHFLRIHRGLRRFICGLCGARYGQNQDLRRHLKAKHQVDMPVISCMDKKAVSEIYVLPPIDKIPESHPHAEKINRLVAEEKSKLEDVGDMVNKTDVATRCIQPEDLASQHNSVIDGTSVQTKHLIAKENVAAYTENPGADSGIGMTCSTMMDLGSGGKSKHPATPSLNIQIQDRGLEEQQQISDIKTGSFVPLDGGVPCPFNSIMKIQTCSQCHRLLCRETVTKGSSENIEAICKKCMGNSLDSDSSTTEKVVTLYRCGMCFMDFFEKNILATHMDENHKVPAEPVFDIVTKNSAGTISNTHTAISSQSRGPSMSTSTEMLCPPENVLLQNIVLQLRPALETLPLTFTSPNILMNPAPVFTLQPSNVPGMLTTSSQTSTVVAPKNFVSTPKLLLQSPAEVLADTGRVLVLEPVSKVAIPKLHSMNKATSDSIALREESPVQKTGVRNSSCESPKCTEKQPVVSEYDCKQCGKRFFNSTRLERHEKTHAGERPFGCAQCGKHFSEKHNLKVHMRTHTGERPYTCTECGKQMRYQKDFADHKKLHMGVKPFKCTECGQQFLRQRELKRHEIIHTGEKKFKCPICDKAFARLDQLKLVHMRQHETTPEPYPFSCITCHKRFKVKAKLEQHQILHSGLKNHYCPICNKAFALDVYLKSHLKTHKKQDGYIRCPKCPRRFASEDTLQVHNEKFHVRLHRNAKETRQGNKKKQKKFTVLPDTTMLEPEIDITDMEEMEGVNLLEEEDDILSDNKCDTVIYLQMVPDLDLSLNGDMSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01289159;
90% Identity: -
80% Identity: -