Basic Information

Insect: Coptotermes formosanus
Gene Symbol: -
Assembly: GCA_013340265.1
Location: BLKM01004458.1:662077-684109[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.0018 0.087 12.8 1.2 1 23 467 490 467 490 0.93

2 19 0.18 8.5 6.6 1.4 1 21 500 520 500 521 0.88

3 19 0.056 2.7 8.1 1.7 3 23 532 552 530 552 0.86

4 19 0.11 5.4 7.2 0.0 6 23 564 582 563 582 0.96

5 19 9.6e-05 0.0046 16.8 0.5 1 23 587 609 587 609 0.98

6 19 0.014 0.65 10.1 1.7 1 23 615 637 615 637 0.93

7 19 3.4e-05 0.0017 18.2 3.8 1 23 643 665 643 665 0.98

8 19 0.00043 0.021 14.8 0.0 1 23 677 700 677 700 0.95

9 19 0.0002 0.0096 15.8 0.9 1 23 719 741 719 741 0.98

10 19 0.017 0.81 9.8 0.5 1 23 748 770 748 770 0.94

11 19 0.00044 0.021 14.8 1.1 1 23 785 808 785 808 0.95

12 19 0.00023 0.011 15.6 1.6 1 23 815 838 815 838 0.98

13 19 0.00015 0.0074 16.2 0.2 2 23 859 881 858 881 0.95

14 19 4.4e-05 0.0021 17.9 1.6 1 23 890 912 890 912 0.98

15 19 0.00029 0.014 15.3 1.3 3 23 920 940 919 940 0.97

16 19 0.015 0.72 9.9 0.4 1 23 946 968 946 968 0.95

17 19 4.6e-05 0.0022 17.8 2.8 1 23 974 996 974 996 0.98

18 19 1.3e-05 0.00065 19.5 0.6 1 23 1002 1024 1002 1024 0.96

19 19 3.5e-05 0.0017 18.2 4.7 1 23 1030 1052 1030 1053 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.0018	0.087	12.8	1.2	1	23	467	490	467	490	0.93
2	19	0.18	8.5	6.6	1.4	1	21	500	520	500	521	0.88
3	19	0.056	2.7	8.1	1.7	3	23	532	552	530	552	0.86
4	19	0.11	5.4	7.2	0.0	6	23	564	582	563	582	0.96
5	19	9.6e-05	0.0046	16.8	0.5	1	23	587	609	587	609	0.98
6	19	0.014	0.65	10.1	1.7	1	23	615	637	615	637	0.93
7	19	3.4e-05	0.0017	18.2	3.8	1	23	643	665	643	665	0.98
8	19	0.00043	0.021	14.8	0.0	1	23	677	700	677	700	0.95
9	19	0.0002	0.0096	15.8	0.9	1	23	719	741	719	741	0.98
10	19	0.017	0.81	9.8	0.5	1	23	748	770	748	770	0.94
11	19	0.00044	0.021	14.8	1.1	1	23	785	808	785	808	0.95
12	19	0.00023	0.011	15.6	1.6	1	23	815	838	815	838	0.98
13	19	0.00015	0.0074	16.2	0.2	2	23	859	881	858	881	0.95
14	19	4.4e-05	0.0021	17.9	1.6	1	23	890	912	890	912	0.98
15	19	0.00029	0.014	15.3	1.3	3	23	920	940	919	940	0.97
16	19	0.015	0.72	9.9	0.4	1	23	946	968	946	968	0.95
17	19	4.6e-05	0.0022	17.8	2.8	1	23	974	996	974	996	0.98
18	19	1.3e-05	0.00065	19.5	0.6	1	23	1002	1024	1002	1024	0.96
19	19	3.5e-05	0.0017	18.2	4.7	1	23	1030	1052	1030	1053	0.95

Sequence Information

Coding Sequence: ATGGTTTCATGTGTTGaggagaataaaaataaatcatgtgTGCAAGGGAGTGATGTATACTCCGAGCCTGTCAGAACGTCATTTGATGTGAATCTGACTACACCTTATACACTGATGATACCAAAAACTACAAACATGAATAAAGgtATGTTATCCAAAACATCGATAAGATCACTGGATTTGGTGACGGTTAGTTCTATAAAACCTAGGGCACCTCCAAATACTACCAAATGTAATGGGGAAAGTCAGTCTAATGTTACTGTGAGCTCAGCACTGGAGATAGTTCATCCTGATATTGTTGGAGGCTCTGATCACCCTGGTCAACTTTGTCGACTCTGTGCCTTGCCCAGACAAGATATGGTGTACATTTTTAGTGAGACAGGTCTTCGGCTTGGCTTACATAGCAAGATTAATACATGGCTACCAACACACGTGAGTAGAACTGATCCCTTGCCAAAGCAAGTGTGTGACATGTGTATTGAAAAACTGGACCTGTGCCAAAGCTTTGGGACTTCATGTGTGAAAGCTGAACAGAAACTCAACCAGTGGTTCAAAAACAGGAAATTCAGgTGCCATTTTCAGTTACATGGAGAACCAGATACAACCTCTTACAAGAATGCTACTGCTTCTATTAAGAGAAATGTTGATCAAAGTTTAACTTCAAAATCCAACCAGATACTTGGtggcagtgttttattttcacctgcAAAAACTACAAATCAATATGATCCTAAAATGAATTTAATCGAATTGCAGAATCTGTTGTCAGACGATGaggaaagtaattatttaatttctgaagaTTCTTCTGAACTTGAACTTGTTGATATGATTTTGGGTGATGATTGTgctgaaggaaataagaaaatagcattgcaaacaaaatactgttGTCCACTTTGTTGCGAAGGACGTATGGTTACTGTGACACGAACAATCAGGGACACATGTTCTTCAAAGAGACCACACAATGAAGAGATTGACACTGAAACTGATACAGAAACAAGGGATCAAATGAGTATAAAGAAACATCCAAATATTCCTGACAGTTCCAGTGCAGAAATGTTTACATATTCAAATGTTCAGTTTATTAGAGGTGGTCATATTTCTGATGGTGTTGATCCAGTGGCACAAGATAGGGATTCTAACTCGTTTACACAGGGCTTGACCAAAGCAGAGAATGAAGATGATAATCTTGAATGGACGATAGGCAGGGGTGACAGGGAGAGTGACAGTGTTGCCGGTATAAATACCAAACAGGGGAATGGGGATGTAAAACCTGAGAAAACAGAAGATGATAATCCTGTAAACTGCTTAATGTGTGGTGGAACTGTGATAAACTTGAGTCAGTGCTTAATTCATACATTATGCACTCATGCAAACAGTGGAACAAATTTTTACCCTTGTAGTCTGTGTGAAACGTGCTTCTCCACTGATACAGACTTGGCTCGACATTTCCTGAACATACACCAGAATATAAAGGATGCAAGGTTGCTTCATGTCTGCATTGTTTGTGGTCGACGTTGTGCTTCCCAGCGAGCCCTAAAATCACATGTGTGCATTCCAGCGAAATCTGTGGCTGATCAACTGGCTTGTAAAACATGCAGCAAGTCTTTCAGCACCAAGGCACGTCTTGTATTCCATCGCCAGTTCCATGATCCTCATGCCCGCTGCCTTGAATGTATCCCATGTGGAATGGTTTTCACAGAGGAGGACAACTTGTATGATCACGTTAGATTTATACATCAAGGGCAGTCCTTTATTTGTAACGAATGTGGAGGGCACTTCAACAGTAAAGCAGCTCTTCGTGGCCACCTTCGATCCCATCGCAACTTGAGACATCATGAATGTGAAGTATGCAATAAGACATTTCTGGATAAACAGACCTTAAAGGAGCACTCTGTGTCTCACATGAAAGTAAAGCCATTTCAATGCCACATCTGTGGCAAATATTTGAACCGAAACTCACGACTCAAGAAACACTTGATGTCTCATGAGCTGCAGAAGACTACAGAGCCTCAAGAATGCTACCAGTGCACAGTGTGTGGACAGACTTTTCCAGATGAATCCAAAGCCATCGCACATGCTCAGATTGGACATTCACTACCCAGTGAGGGTGAATGTGTATTCCAGGTTTATCCTATAGACAAGGTTTACCGATGTGAGTTCTGTGAGCGTTGTTACGCTGATCCTGCTGCTCTCAATTCGCATCGATCAAGCCATGTTAATGAGCCCCACCCTTTCAAGTGTCACATATGTGGTGCAGGTTTTGCAACATTTGCACGTGTGGCAACTCATAAAGTGACTCATGGTATCTATGAGAAGAAAGATGAGTTCTCAATTCCAAAGTTATATCTATGTAACACTTGTGATAGGGCATATGTCCATTGGACATATCTCTCGGTCCATCGTAAGATGATACATGCAGAGGTGAAACACGTGTACAAATGCAAGatgtGTTCTGAGCAGTTTGTAAACTCATGGAGCCTAGCTTACCACCGAAAAACACGTCATTGTGAGACAGAACCACCTTCCACTGACAGTGGGTTGCCTGCAAATGAACGAAAGCCATGGAAATGCGACTACTGTGAGAAACGCTATGTGTCGCAGCAGTCACTTTTAGTTCACATTAATCTGTTACATACAGGAGACAGCCCTGGCCCAACCTTCCAGTGTGATCAGTGTGGAAAACGGTTCATGCGCAAGTTGTCTTTAGAATTACACAAGAAAATACACAGTGGGACAAAATCTAATATGTGCCCTCTGTGCAAGAAAACATTTGTACATGGCTCAGGCCTTTCAACGCATCTACGATTACATCGGGGTGACAGACCTTATGCCTGTGCATATTGCGGCAAAACTTTCCTTCAGAGAGGAGACAGGGATGACCATGTTCGCAAACACACCGGAGAAAGGCCCTTTTCTTGTCAGCATTGTCCTAAATCTTTCCGAACACGAGCCATGTGGTTTGAACATACTAGGATCCATCGTGATGAACGCCCATTCCCTTGTGACATTTGTGGATCTTCATTCCGCCGTTCATATGCTCTGAAGAATCACAAGACCATCCACACAGGCGAGCGCCCACATGTATGTCAGATATGTAACAAGGCATTTAGGCAGAAGCAGGATATGcagaaacatgtaagaaatCACCATAGGCCAATCACAATAGGTCCAGTGCTGGCACACCAATCAAAGATGGAATGGTTGTCACTGGAGATGCATGTTGCATGTGTTGAGTTAGTTCTGCAAAGAAATTGTCTGATGGAAACGTAA
Protein Sequence: MVSCVEENKNKSCVQGSDVYSEPVRTSFDVNLTTPYTLMIPKTTNMNKGMLSKTSIRSLDLVTVSSIKPRAPPNTTKCNGESQSNVTVSSALEIVHPDIVGGSDHPGQLCRLCALPRQDMVYIFSETGLRLGLHSKINTWLPTHVSRTDPLPKQVCDMCIEKLDLCQSFGTSCVKAEQKLNQWFKNRKFRCHFQLHGEPDTTSYKNATASIKRNVDQSLTSKSNQILGGSVLFSPAKTTNQYDPKMNLIELQNLLSDDEESNYLISEDSSELELVDMILGDDCAEGNKKIALQTKYCCPLCCEGRMVTVTRTIRDTCSSKRPHNEEIDTETDTETRDQMSIKKHPNIPDSSSAEMFTYSNVQFIRGGHISDGVDPVAQDRDSNSFTQGLTKAENEDDNLEWTIGRGDRESDSVAGINTKQGNGDVKPEKTEDDNPVNCLMCGGTVINLSQCLIHTLCTHANSGTNFYPCSLCETCFSTDTDLARHFLNIHQNIKDARLLHVCIVCGRRCASQRALKSHVCIPAKSVADQLACKTCSKSFSTKARLVFHRQFHDPHARCLECIPCGMVFTEEDNLYDHVRFIHQGQSFICNECGGHFNSKAALRGHLRSHRNLRHHECEVCNKTFLDKQTLKEHSVSHMKVKPFQCHICGKYLNRNSRLKKHLMSHELQKTTEPQECYQCTVCGQTFPDESKAIAHAQIGHSLPSEGECVFQVYPIDKVYRCEFCERCYADPAALNSHRSSHVNEPHPFKCHICGAGFATFARVATHKVTHGIYEKKDEFSIPKLYLCNTCDRAYVHWTYLSVHRKMIHAEVKHVYKCKMCSEQFVNSWSLAYHRKTRHCETEPPSTDSGLPANERKPWKCDYCEKRYVSQQSLLVHINLLHTGDSPGPTFQCDQCGKRFMRKLSLELHKKIHSGTKSNMCPLCKKTFVHGSGLSTHLRLHRGDRPYACAYCGKTFLQRGDRDDHVRKHTGERPFSCQHCPKSFRTRAMWFEHTRIHRDERPFPCDICGSSFRRSYALKNHKTIHTGERPHVCQICNKAFRQKQDMQKHVRNHHRPITIGPVLAHQSKMEWLSLEMHVACVELVLQRNCLMET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01289137;
90% Identity: -
80% Identity: -