Cfor001528.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Coptotermes formosanus
Gene Symbol
ct
Assembly
GCA_013340265.1
Location
BLKM01001294.1:3608551-3962322[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3e-27 1.9e-23 81.8 0.0 3 72 419 489 417 494 0.95
2 3 6e-32 3.7e-28 96.8 0.0 3 77 841 916 839 918 0.96
3 3 1.5e-30 9.6e-27 92.3 0.0 3 75 1060 1133 1058 1137 0.95

Sequence Information

Coding Sequence
ATGGACATCCAGGCAATGCAGTCCATGGACTGGCtttttaagaaagaaaggatCTACCTGCTGGCGCAGTTTTGGCAGCAGCGCGCGACGTTGGCAGAGAAAGAAGTGAACGCGTTGAAGGAACAGTTGGCAACGGCAAACCAGAGCCTGCAGTTAGTGGAAAGCAAAGGCGGTGGCGGCAATAAGCCCCCCGGGGGAGGCGGGGGTGATATGGAACCGAACACGATGGACATCATCTCCCGCTCCGGGCTTGAAGTCGAACTTGCCGCGAAGGAAAAAGAGATCTCGCAGTTGGTGGAGGACGTGCAGAGGTTGCAAGCCAGCATCACCAAACTCCAGGAGACGTCTGCGGGGCAGATCGCAAGGCTGGAGGAGCAACTGGACCACAAGCGGCAGCATATTGCGCGCCTCGAGGCTCGGCTAGATGCACAGAGGGACTACGATGACGTCAAAAGGGAGCTCAGTCTTTTGCGCAGTATCGAATTCCCGTCGATTGGTCCAGGAGGTCCTTCAAGTGAAACCAGTAAGTCGCTGGAGATGCTTCTCCTGGAAAGGACGAAGGCGCTGCAGCAGGCGGAGACTGCCGCTCTGAAGGCTGCAGCTGATCTCCAAGATATTCAGCAGCCATCTCCAGCAACCCCCAACTCCACGCACCAGCAACCGTCATCGGCGGACAGTAACAAACCTGAAGGCTCCACATCCCCGCACAACACGCCGCCTTCATCTGCGACACCATCTTTCACTTGCACGTCATCGCCCACATCACTGTCGTTAGTTAACACGACGACAGCAATATCATCACCGTCAGCGGCCACAACGACGACAGCGACAACATTATCTTCAGCGGGAGACAATGGAACAGCTCTCCATCATCACCTCATGAACGGGAACCCGAAGACGCCTCCCGAGGACGCGTCGTCTACAGCGTCGACAGTTAGTGCGTTGTGTAACAGTAGCAGTCACTTATTGTCGAGTGCGGGTTCTTGTAACAATAATGTGATCCCACCGCCCCCAACAAGCACCCCCGTCAGTGTGGCGGCAGGACTTAGTTTCCTTAGAAATGACGATAGTATGAAAAGCCCCTTTAGGTTCGAGGATCCCCGAAGCCCTTTTCGTTTTTCGGAAGATGGTGGACCAATGACTCCAAGTAGTGTAATGGTAGGACGTTTAGGCGAATCTTTGATACCAAAAGGAGACCCGATGGAAGCAAAGTTACAGGAAATGTTGAGGTACAACATGGACAAGTACTCGACACAAAATCTCGATACGCTGCATATATCAAGGAGGGTGCGCGAACTTTTGTCCATTAATAACATTGGCCAGAGACTTTTCGCTAAGTATGTTCTTGGACTATCACAAGGCACCGTCTCCGAGTTACTGTCCAAACCGAAACCGTGGGACAAGCTCACGGAGAAAGGGCGGGACAGCTACCGGAAGATGCACGCTTGGGCGTGCGACGAAAATGCAGTCCTACTCCTCAAGTCACTCATCCCAAAGAAAGGAAAAGACACGGGTATCCCAGCGTTCGCCCGAGGCGACACGGACAACATGACAGAGGAGAGGATAGCGCACATCCTGAGCGAGGCGAGTCAGATGATGAAGACACAGGTGGAGGACAGCCACAGCAATGACAGCAAGTCTCCAAACCAAGGACAGTGTCCGTCTCCGCTCGGTAAGGACGGTTCTCAGAACCGCCGACTGAAGAAGTATGAAAATGATGACATTCCTCAGGAGAAGGTAGTACGAATCTACCAAGAAGAGCTTGCCAAATTGATGGGCCGCCGCATGGACGATTCTATGAGGGGGCCTCGTGAACACTTCCCAAGTTTGCTCTTCCCTCATTTCTTTAGTGctggtggaggtggtggcggTAGTGGGCCCATGGATCGAACCCAAGAAGAAATACGCATGGCTCTAGACGCGTACCACCGGGAACTGGCGAAACTCAACTCTGTATCCTCCTGTCCCACAATTGGCAGTCCTGCTGGACTTCCAGGTCTTCCAGGTCTTCTCGCTCTACAGCAACAAGCTCTGAGTCAACACCAGCATCAACACGCACAGCTAAATGGGGTCGCACAGGATCTGTCACTGCCTAAGGACCGCAAGGACAGTGGCAAGCTGCCTAATGGGGGTGCAAATGAGCTGCTGATGGAAGGGGTTGATAGCAAGAAGGAGCCTAGCATGATGGAATCTGTCGCTGATGTCCTAAGGCATGCTGGTAGTGCTTTTTCCCTTGTCAGGCCAAAAACAGAGCCAGGAGTGGCCCCAGGGAGTGGATCCCAACAGCCCACAACAGGCAGCAGCGCAAGCAGCCCATTGAGCAACTCTATCCTGCCCCCTGCCATGACACCAGGCGATGACTTCTCAAGTGGAGCTGCAGCTGCAAGTCCATTGCAGCGCATGGCATCCATTACAAATTCACTCATCTCACAGCCAAGCACTCCAACGCATCACAGCCCATCACAGCGGCCGCTCAAAGCTGTCCTACCACCGATTACACAACAACAGTTTGACATGTTCAACAATCTCAACACGGAGGATATTGTCAAGAAGGTTAAGGAGTCACTGAGTCAGTATTCAATAAGCCAGCGGCTGTTTGGTGAATCTGTACTGGGTTTATCACAAGGCAGTGTGTCAGACCTGCTTGCTAGACCAAAGCCATGGCACATGCTCACACAAAAGGGAAGGGAACCATTCATTCGCATGAAGATGTTCCTGGAAGATGATAATGCAGTCCACAAATTGGTGGCCAGCCAATACAAGATTGCACCAGAGAAGCTGATGAGGACCGGTAGTTATGCAGGTGGACCTCCTTGTTCTTCACTTGGCAAACCACAACCACCCTCTTCAAAGCTGTCTGATGCTGTCTGCAACAAAAATCTCCCCGGTGACAACCAAGGCTCCATTTTACCTCCTTCCCTACAACTCATCCCCCCACACCCTCAACACCCGCCATCAGTACCCCAACCACCCCCTCCACCACTGATGGTTACTCCACCAGGCCATCATTCGATTGGGTCATTAACAAGTTCAGACTTGAAAAAGTCCCAGCAGAACCACCAGTCATCCCATCCTAACCTTCAtacatcacatcatcatcatcagcaacaATCATCAGCACTGCGTGCACTGCAGCAACACATGACTCCAAGCGTTTATGAGATGGCTGCCCTAACCCAGGACCTGGATACACAGGTCATCACAACCAAGATCAAGGAAGCTCTTCTTGCCAACAACATTGGGCAGAAAaTCTTCGGAGAGGCAGTGCTAGGTCTGTCACAAGGTTCTGTGAGCGAGCTGTTGTCCAAACCAAAACCATGGCACATGCTGAGCATCAAGGGACGTGAACCATTCATTCGTATGCAGTTGTGGCTGAGTGATGCACATAATGTAGATCGACTGCAGGCCCTCAAGAATGAGCGACGAGAAGCAAATAAGCGCCGCCGCAGCAGTGGCCCTGGTGGtggtcttggtggtggtggtggtgctggtggtggtggtggcggtggtggcgctGACAACAGCAGTGATACATCTTCCAATGATACTTCCGAGTTCTATCACAGCCCAAGTCCTGGGCCTGGACCACCATCTGCCAAGAAACAGCGAGTTCTCTTCTCTGAGGAGCAGAAGGAGGCACTTCGCTTAGCATTTGCTTTGGACTCGTACCCTAATGTAGCCACCATTGAATTTCTGAGTTCTGAACTGGCACTCTCTTCACGTACTATTACCAATTGGTTCCATAATCATCGGATGCGACTGAAACAACAGGTGCCTCATGGTCTGGTACCAGATGGGGCCGGAATATTGCCACCACCACGTAGTAATGATACTTCCAATGGCGGACAGCAGTCTTTTGACCCTGTTCAGTTCCGTCTTTTACTTAACCAGCGTTTGTTAGAGCTACAGAAAGAGCGCATGGGTCTTGGTTCCGTCCCTCTTCCCTACCCACCCTACTTTGCAACAAATGCAAACCTGGCTGCCCTAATTGGTAGAGGCTTGCTTCCCACGCCTGACTGTGACCCTAAGGAGCAGTTCAGTGGACTTGACCTGAGCATGGGTGGACTGAAGCGGGAGCCTGCAGACTATGAAGATGAGGAGGATGTGGAGAGCAACATGGGTAGTGAAGATTCGAACCTCTCGGCAACAAGCCTACGGGAGACTGCAAACCCAGCTGCAGTCAAGAAGGAATCATCAGTGATTCCTCCCACAACAGGGCGATCATCAAGACGTAAGCCGGCTGCACCTCAGTGGGTTAATCCTGAGTGGCAGGAGGCTGTGGTAACAGAAACAGGGAAAGACAAACCTGCTGGTAGTAGAGGAGACAAAGAAGTGATTAttaatggtgtgtgtgtgatgcaaGCGACAGCTGCGGATGACTATGGCATGAAGCTCAGTGCCACCGATGAGGAAACAGTCCGGGTGGAGCCAACACCAGTTCTTGACCCTTATGAAGATCGATGCAGTGATGCTTCATCAGATGCTGTTCCTGTTGAGGAACAACGGACCCAGCCTACACCAACTGAACATGACGAAGAAAGAGGAAGTGCTAAGTCAGAACTTTCATCTCCACAggatgaggaggaagaagaagaaagactgGAGGAAGGAGAGGAAGCTGAGGAGGAAGCAGATGGTGAGGTGACAGAAGTGGAAGGGTCTGTAGAAGTGAGACATAAATTCATTAAGCAAGAAGATGAGGATGAAGAAGGAAGAGTATCCCCTAGTGAGGAGGAACAAAAGGAAGGGGAATGGGACAGGGCAAGTGGGAAAAGGCCACTGGCAGAAAGAGACACTGTGATCGACAAGAGAATTAAGGCAGAAGATAGGGAGGAGAGGTGGGAGTATTAA
Protein Sequence
MDIQAMQSMDWLFKKERIYLLAQFWQQRATLAEKEVNALKEQLATANQSLQLVESKGGGGNKPPGGGGGDMEPNTMDIISRSGLEVELAAKEKEISQLVEDVQRLQASITKLQETSAGQIARLEEQLDHKRQHIARLEARLDAQRDYDDVKRELSLLRSIEFPSIGPGGPSSETSKSLEMLLLERTKALQQAETAALKAAADLQDIQQPSPATPNSTHQQPSSADSNKPEGSTSPHNTPPSSATPSFTCTSSPTSLSLVNTTTAISSPSAATTTTATTLSSAGDNGTALHHHLMNGNPKTPPEDASSTASTVSALCNSSSHLLSSAGSCNNNVIPPPPTSTPVSVAAGLSFLRNDDSMKSPFRFEDPRSPFRFSEDGGPMTPSSVMVGRLGESLIPKGDPMEAKLQEMLRYNMDKYSTQNLDTLHISRRVRELLSINNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAVLLLKSLIPKKGKDTGIPAFARGDTDNMTEERIAHILSEASQMMKTQVEDSHSNDSKSPNQGQCPSPLGKDGSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRMDDSMRGPREHFPSLLFPHFFSAGGGGGGSGPMDRTQEEIRMALDAYHRELAKLNSVSSCPTIGSPAGLPGLPGLLALQQQALSQHQHQHAQLNGVAQDLSLPKDRKDSGKLPNGGANELLMEGVDSKKEPSMMESVADVLRHAGSAFSLVRPKTEPGVAPGSGSQQPTTGSSASSPLSNSILPPAMTPGDDFSSGAAAASPLQRMASITNSLISQPSTPTHHSPSQRPLKAVLPPITQQQFDMFNNLNTEDIVKKVKESLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGSYAGGPPCSSLGKPQPPSSKLSDAVCNKNLPGDNQGSILPPSLQLIPPHPQHPPSVPQPPPPPLMVTPPGHHSIGSLTSSDLKKSQQNHQSSHPNLHTSHHHHQQQSSALRALQQHMTPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGGGLGGGGGAGGGGGGGGADNSSDTSSNDTSEFYHSPSPGPGPPSAKKQRVLFSEEQKEALRLAFALDSYPNVATIEFLSSELALSSRTITNWFHNHRMRLKQQVPHGLVPDGAGILPPPRSNDTSNGGQQSFDPVQFRLLLNQRLLELQKERMGLGSVPLPYPPYFATNANLAALIGRGLLPTPDCDPKEQFSGLDLSMGGLKREPADYEDEEDVESNMGSEDSNLSATSLRETANPAAVKKESSVIPPTTGRSSRRKPAAPQWVNPEWQEAVVTETGKDKPAGSRGDKEVIINGVCVMQATAADDYGMKLSATDEETVRVEPTPVLDPYEDRCSDASSDAVPVEEQRTQPTPTEHDEERGSAKSELSSPQDEEEEEERLEEGEEAEEEADGEVTEVEGSVEVRHKFIKQEDEDEEGRVSPSEEEQKEGEWDRASGKRPLAERDTVIDKRIKAEDREERWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01566872;
90% Identity
iTF_00370129;
80% Identity
iTF_00370129;