Basic Information

Gene Symbol
KDM5A
Assembly
GCA_013340265.1
Location
BLKM01012994.1:1812099-1857911[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.5e-23 3.1e-20 71.8 0.0 2 89 103 186 102 186 0.95
2 2 1.3 2.7e+03 -1.7 0.1 47 81 795 827 791 839 0.70

Sequence Information

Coding Sequence
ATGGTGTCCAGAGGAGACAGGGCGAGTGGCTTTTCCAAGAGCCCTTCCAGTGACAAGTTGAAAGGGTCAACACAAGACTTTGAATTCACCGTACCACCAGAAGCTCCGGTATTTGAACCAACGAGTGAAGAATTTCAAGATCCTTTAGGATATATAAGGAAAATTCGTCCAGTTGCAGAACAGTCTGGCATATGCAAAATAAAGCCTCCTCCGGACTGGCAACCTCCTTTTGCTGTGGATGTTGACAAATTCAAATTCACTCCAAGGATTCAGCGTCTAAATGAACTGGAGGCAAAAACACGAATAAAGTTAAACTTCTTAGATCAGATAGCAAAATTTTGGGAACTGCAAGGATCTTCATTGAAAATTCCAATGGTAGAAAGGAAAGCATTAGATCTTTATACACTGCACAGGTTCATCCAAGAAGAAGGTGGTGTAGAAATTGCAACAAGGGAAAGGAAGTGGGCGAAAGTTGCTGCGAGAATGGGCTTCCCTCCTGGAAAGGGTGTGGGAACACTCTTGAAGAATCATTATGACAGGATACTCTATCCGTTTGATGTGTTTCAGCAGGGGAAACTTGTTGGGCAGATTAAGATGGAGCCAGAGcatgatgaaaatgaaaagagagATCAGGATTACAAACCTCACGGTATTCCTTCACGACAAGCAATCAAGCCACCACAAGAGAAATACAGCAGGAGGTCCAAGCGATATGGACCTGGTGACTCTGACTCTGATAATCCGATTGGACAAGACATCGCAGATGGAAGTGATAATAAAGAGCTGAGGAGGCTTCAGTTCTATGGAGCCGGTCCAAAGATGGCTGGATATCAAACGCGAAGAGAGGAGAagcctaaaaataaaacaagaggaAAAAAAGTCAATTATGAGTTTGATCctCTTGCCAAGTATGTATGTCACAACTGCGGGCGTGGGGATGTTGAAGAGTCCATGTTGCTGTGTGATGGCTGTGATGATAGTTACCACACGTTTTGTCTCATGCCTCCGCTTTTGGAAATTCCTAAAGGTGATTGGAGATGCCCAAAATGTGTTGCTGAGGAGGTGAGCAAACCCATGGAGGCGTTTGGTTTTGAGCAAGCGCAGAGGGAGTACACATTACAGCAGTTTGGAGAGATGGCTGATCAATTCAAGTCAGACTACTTCAACATGCCTGTTCACCTGGTTCCCACACCTCTTGTAGAAAGGGAGTTTTGGCGAATTGTTTCTTCTATTGATGAAGATGTAACAGTAGAATATGGAGCAGATTTACATACTATGGATCATGGATCTGGTTTTCCAACCAAGTCAACACCAGACTTGCATCCTGTTGATCAAGAATATGCAAATTCTGGTTGGAATTTAAATAATCTTCCTGTCCTTGAGGGTTCAGTTTTGGGTCATATTAATGCAGACATATCTGGGATGAAAGTGCCATGGATGTATGTTGGCATGTGCTTTGCAACCTTCTGTTGGCACAATGAAGATCACTGGAGCTACTCAATAAACTATCTTCACTGgGGTGAACCAAAGACATGGTACGGTGTGCCTGGCAGTAAAGCagagtcttttgaaacatcaaTGAAGATGGCAGCACCAGAGCTTTTTCAGTCACAACCTGATCTGCTACATCAACTTGTTACAATCATGAATCCAAATATTCTTATGCAAGGAGGTGTTCCTGTTTGTAGGACAGATCAACATGCTGGAGAATTTGTAGTAACTTTCCCAAGGGCTTACCATGCTGGTTTCAATCAAGGGTACAATTTTGCCGAAGCTGTCAACTTTGCACCAGCTGACTGGTTGAAAATGGGGCGCGAATGCATAAGTCACTATTCCATGCTGCGCCGCTTTTGTGTTTTCTCACATGATGAGCTTGTGTGCAAGATGTCGTTGGACCCAGATGCCTTGGATCTTACTGTAGCAGCTGCAACATACCAGGATATGTTGCAGATGGTGGATATCGAAAAGAAAATGAGGAAGTCGTTACTCGAATGGGGTGTTACCGAAGCTGAAAGGGAAGCATTTGAGTTGCTGCCTGATGATGAGAGGCAGTGTGAAGTGTGCAAGACAACGTGCTTCTTGTCAGCTGTAACGTGTAGTTGCAGCGCAGAACATTTGGTTTGTCTGAGGCATTATTCGAGCCTGTGCTCGTGCCCTCCGGACAAGCATACGTTGAGGTATAGGTATACACTAGACGAGTTGCCGGTCATGTTACATAAATTGAAGCTACGGGCAGAGTCCTTTGATAACTGGGTACTAACTGTAAAAAATGCACTAGATGTAAATGCTCCCAAGAAACTAGACCTTACAGAAGTTAAATCGTTGTTGCAAGAAGCAGAACAGAAAAAGTTTCCTGAATCAGAATTGTTGCAGGCATTAATGCAAGTTGTCACAGAAGCAGAGAAATGTGCAAGTGTTGCCCAACAACTTGCCTGCAAGAAAGTTCGTACACGGACACGCCAGACTGTGGAAGCAAAGTACAAACTGACAGTGGAAgaactgtcattattttatgaacaaataGAAAGTTTACCTTGCACAATAAAAGAGGGAGAAGGAGTGAAAGAGTTGCTTGACAGAGTTACAAACTTTCAGAAGGAGGCTGCTGTTCTTTTAAACCAAGAAATGCCAGAATCACAATTGCTGGATAAATGTATAGAGAATGGGGTTGTATTGGACATTGAGTTGCCAGAAATTCCAAAGCTGAAGCAgACTTTAGATCAGATGAAGTGGTTAGAAGATGTGAGAGATTTACACGAAGATCCAGAACAAGTCACTTTGGAGTCCCTCAGGAAGCTGCTGAATGTTGGTGTAAGTTTGCCTCCACATTCGTTAGTAGAGAAATCTATGGCTGAGCTTCAGGAACTTCTAACACATGTGGAAAAGTGGGAAGAGAAAGCCAAGGTCTGCTTACAAGCAAAGTCCCGTCAGACAATCAGCACCATAGAAACAATTCTGAAGGAAGCAGAGGCAATTCCAGCTTTTCTTCCCAATATTGGAACCTTAAGAGATGCTCttaggaaaggaaaggaatggTCTGCAAGGGTGGAAGCAATCCagAGGGCTGAAAATTTTCCTTACATGGATGCTTTGGAATTACTTGTAAACAAAGGCCGCAACATCCCCGTTCGTCTCGATCTGCTTCCGCAACTGGAGTCACAACTGAGCGGTGCCAAGACTTGGAGAGATCGAACGGCTCGTACCTTTCTGAGGAAGAATTCACATTATACACTAATGGAAGCATTGTCACCAAGGGTTGAAGTGGGTGTGTCAGCTTTGAAACTGAAAAAACGCCGTCTCCGTGAAGATAATGCTCCAGTTATGGTTGCTCCAGTAGTGTGTGATGTTAAGTTGGAAGGGGATGTAGATCCAGCTTCTGTTGTTGCAGCTTTCAAGggAGCAGAGGAACAGGAGATGGTTGCTATGCGTGAACTGCGTTTAGAAAATCTAAAGAAGAGAGTCAGTGATACAGGAGATGCAAAGTACTGCGTGTGTCGTCGTGGGGTTTCAGGATTTATGCTGCAATGTGAATTGTGCAAAGACTGGTTTCATGCGACGTGTGTTCCACTTCCAAagagcagcagcaacaaaaataagCAGCAGACCCCAGCACAACAACTGGTTGCTGCAGCATCTAGGGAGCTCAAGTTTCTCTGCCCCTGTTGCTTGAGGTCACGTCGTCCTCGTCTCGAAACCATTCTTTCTCTTCTTGTTTCTCTTCAAAAGCTTCCAGTTCGTGTTCCAGAAGGGGAGGCTCTTCAGTGTCTCACAGAGCGGGCAATGAACTGGCAGGATCGTGCTCGTCAAGCACTTGCAACAGAAGAACTTGCATCTGCACTGGCAAAGCTGTCTGTCCTATCACAAAAGCTTGTTGAGGCTGTTGCACGTGAGAAGACTGAAAAGATAATCAGCAGTGAACTAAAGAAAGCTGCCAGCAATCCTGAGCTGCATCGCCGAGTGCAGGCCATTTCATCCCTCAGTGGTGTGCAGAGTGAAGACTCCCTGGGCTCACAGCCAAGTCCACCACAGATGGGGGAATCAAGTGGCATTGAGGTGGATGCTGCTGCTGACTCTTTGCGAGAATCATTTGATCAAGCAAATGATCAGTCTCGTACGTCATTTCCccatgacgatgatgatgatgacgatgatgatgattcagtgTTGACGTCAGCTAATTTGAGAACAGACGAAGATGATGATTCACACTATGAAGAATGCAGTAATCCTTACAGCAATTCAGAGCATGCTTATTCATCAGCTTCAAAACTGGGGTTAGGAGGGTGCAAGAAACACGTTCGTAAGACTCCATTAGTGCCTCGACAGCTGGAACAACCTGTACTGGCCCTTAGTGAGATGGCTCGAGCTCAGCTTGAGGAACTGATGATGGAGGGGGATCTTCTGGAAGTGTCTCTTGATGAAACCCAACATATATGGAGAATTCTTCAAGCCACTAAGCCTCGTCAAGAAGAGAAGTTCCCAGATTTTGAAGAGCTAGAGCAtgaattattacaaaacaaaatcgAAAAGCAGAAGCTGAAGGACAAGCGGAAAGCCAAGAAACGTACACCAGAAGAAATGGAATTTGCAGGTGGAAGCAAGAAACTGAAGGTTAAAATGGGAAAAGAGCTGGAGGAAAGGAGTAAGAAgtggaaggagaagaagaaattcaaGGAGCAGAAGGAATCCATTAAGAAAGTCCGGAAGATAAAGAGAAGAATTGAGACATTAGATAAGAAAAAATCCTGTCCTCGTGTGAAGAAAACCAAACAGGAATGTTCAGATGATGACGAGGACTGTGCGGCTCCAACTTGCCTGAGACCAACAGgGCATGAAGTAGATTGGGTACAGTGTGATGGGGGTTGTGACAAATGGTTTCACTTGCACTGTGTTGGTCTTGATAAAGAGGATGTAAATGAAGATGAGGATTATATATGTAAGAATTGCATGCCATTGCAAGAACATGACCACGATGACAGCAACCGAGTTGGTGAGGAAGAAGTAGATTTGTCTCGTGTGAAGATGGAACTGCAGAATGTTGATGAAAGTATGGGATTGGATGCATTGCTTTCTTTAGCCAGTGGCTTGCCTAGCCATGATTCATCACTGGAAGATCCTTTAGCAATGAGCACTGGGGATTGGGTTATGTCAGGATGTCATGGAAATGATTATGGAGAGGCTGAGAAGGGCTTACAGGAATCAACAACATCAGGACCTGCAGTGGTTGCACTTGCTTCTACCTCTGTTGTAAACATACCATCAAGTGTTTCTGCAGTTGAAGAGATGCAGTCTACAGAGACAGCTGCATTGGAAGTGGATGTTACCGGTGAGGACAGCAGTTTTTCAAGACAAGACTGA
Protein Sequence
MVSRGDRASGFSKSPSSDKLKGSTQDFEFTVPPEAPVFEPTSEEFQDPLGYIRKIRPVAEQSGICKIKPPPDWQPPFAVDVDKFKFTPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRFIQEEGGVEIATRERKWAKVAARMGFPPGKGVGTLLKNHYDRILYPFDVFQQGKLVGQIKMEPEHDENEKRDQDYKPHGIPSRQAIKPPQEKYSRRSKRYGPGDSDSDNPIGQDIADGSDNKELRRLQFYGAGPKMAGYQTRREEKPKNKTRGKKVNYEFDPLAKYVCHNCGRGDVEESMLLCDGCDDSYHTFCLMPPLLEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHLVPTPLVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSTPDLHPVDQEYANSGWNLNNLPVLEGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSKAESFETSMKMAAPELFQSQPDLLHQLVTIMNPNILMQGGVPVCRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECISHYSMLRRFCVFSHDELVCKMSLDPDALDLTVAAATYQDMLQMVDIEKKMRKSLLEWGVTEAEREAFELLPDDERQCEVCKTTCFLSAVTCSCSAEHLVCLRHYSSLCSCPPDKHTLRYRYTLDELPVMLHKLKLRAESFDNWVLTVKNALDVNAPKKLDLTEVKSLLQEAEQKKFPESELLQALMQVVTEAEKCASVAQQLACKKVRTRTRQTVEAKYKLTVEELSLFYEQIESLPCTIKEGEGVKELLDRVTNFQKEAAVLLNQEMPESQLLDKCIENGVVLDIELPEIPKLKQTLDQMKWLEDVRDLHEDPEQVTLESLRKLLNVGVSLPPHSLVEKSMAELQELLTHVEKWEEKAKVCLQAKSRQTISTIETILKEAEAIPAFLPNIGTLRDALRKGKEWSARVEAIQRAENFPYMDALELLVNKGRNIPVRLDLLPQLESQLSGAKTWRDRTARTFLRKNSHYTLMEALSPRVEVGVSALKLKKRRLREDNAPVMVAPVVCDVKLEGDVDPASVVAAFKGAEEQEMVAMRELRLENLKKRVSDTGDAKYCVCRRGVSGFMLQCELCKDWFHATCVPLPKSSSNKNKQQTPAQQLVAAASRELKFLCPCCLRSRRPRLETILSLLVSLQKLPVRVPEGEALQCLTERAMNWQDRARQALATEELASALAKLSVLSQKLVEAVAREKTEKIISSELKKAASNPELHRRVQAISSLSGVQSEDSLGSQPSPPQMGESSGIEVDAAADSLRESFDQANDQSRTSFPHDDDDDDDDDDSVLTSANLRTDEDDDSHYEECSNPYSNSEHAYSSASKLGLGGCKKHVRKTPLVPRQLEQPVLALSEMARAQLEELMMEGDLLEVSLDETQHIWRILQATKPRQEEKFPDFEELEHELLQNKIEKQKLKDKRKAKKRTPEEMEFAGGSKKLKVKMGKELEERSKKWKEKKKFKEQKESIKKVRKIKRRIETLDKKKSCPRVKKTKQECSDDDEDCAAPTCLRPTGHEVDWVQCDGGCDKWFHLHCVGLDKEDVNEDEDYICKNCMPLQEHDHDDSNRVGEEEVDLSRVKMELQNVDESMGLDALLSLASGLPSHDSSLEDPLAMSTGDWVMSGCHGNDYGEAEKGLQESTTSGPAVVALASTSVVNIPSSVSAVEEMQSTETAALEVDVTGEDSSFSRQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
iTF_00396088;
80% Identity
-