Basic Information

Gene Symbol
ARID4B
Assembly
GCA_013340265.1
Location
BLKM01007598.1:995787-1049314[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.4e-29 1.7e-25 88.7 0.1 1 89 308 394 308 394 0.96

Sequence Information

Coding Sequence
ATGCAGCCCTGGAGCAGAAAGAAGGGAATGATGGGAGATGACCCACCTTACCTTGCAGTTGGCACTGAGGTTAGTGCCAAATACAAAGGAGCATTCTGTGAAGCCAAGGTACGAAAGGTGGTCAGAAGTGTCAAGTGTAAGGTAACCTTCAAGCTTGGCCTTGGCTCAGCAATCATAACGGACGACCAGATCAGAGGCACGCTTAGGgttgGCTCTGTGTGTGAAGTGAAACATCCTGAGAAGAAAGAATTTGTTGAAGccacaataaacaaaatacaggatTGTAGCCAGTATACAGTTGTttttgatgatggtgatatcacaacactcagaagaacTGCTCTCTGCTTGAAAAGTGGTCGTCATTTTGCTGAAAGTGAAACATTGGACCAACTACCATTAACACACCCAGAACACTTTGGAAATCCAGTTATAGGAGGCCGGAAAGGAAGGCGAAACCGCCAGATACATGGTGATGATAGTAGCGATGATGAAGATAACCCACGGAAGGGTaaaagaaaagaggaaaagGAGGCTGATATTggaaaagttgtgtgtgtggaacTGGGAGacaagaagaagcagaaagatAACTGGTTTCCAGGATTGGTGGTGGCCCCCACAGCTCAAGATACAGTACGAATACGAGTCCGTGATGAGTACCTCGTGCGCTCCTTTAAAGATGGAAGATATTTTACGGTACCAAAAAAGGAAGCTACAGAATTTACAAGAGAAATTGGGGCGAAGGTGGATAATAACACTCTAAGAACTGCAGTAGAGAAAGCACTTCTGTACTTGGACAGGGATGAGCTTCCTCCACATTGGGATCGGGACCTGTTATTCAGAATGGATGAAAGCAGTGGTAACAGTGACAGTGATGGAGGATTTGATTCAgatAGTTCTGATGATGAGCCACGGGAAGAGAAGGATCACTTTGTGGCTCAGCTGTACAAGTTTATGGATGACAGAGGTACACCAATAAACAAGGGCCCTATCATTGGCACTAGGGATGTGGATTTGTACAAACTCTTCAAGGTTGTTCATAAGCTCGGTGGATACAACAGGGTTACAAATCAAAACCAGTGGAAAACAATCTCGCATAAGTTGGGTTTCGGTCAAGGCAGTTCCAGCATCGTGAATCTCGTTAAACAAGCATACAAGAAGTTCCTGCATAGTTTTGAAGATTTCTATCGAAAATTGGGTTGCACCATGGTTAACCATCCTCGTGGCAACAGATCAAGGCACCGGTCAGGTCGGAGTCTCATTAGGGACCGGGACCGTGCAACTCCTATTAATCCATTGAGGGACAAGGAAAAACCTGTTACACCAGTGGTGATGGAGAAAGTTCCTGAAGTTTTGGAAAAGGATAATTCTCACACAGTTAAAAAGGAAGATGAAGAAATCTCTGTTGAGATTGAGAAGAAAGAGAAGTTGGAGGAAACACCTAAACCAAAACTTCAGAAGAAggataaacataaacaaaaggAGGAAAAAGCTGATGTTCCAAGTAAAGAAGAGAAGAAGTCCGAGAAATTGCGAGTAAAGGATTTGAGTGAGGCCAGTGTGGTGATTGAGAAGTctaaaggaaaggaagaaaaacctAAAACAAATGATACAATTAAAGATGAAGCAGAAGAGAAGACAGAAAGGTTAAGGGTGAGAGAGACACGGAAAGATGATAAAGGGAAAGAAGTTCGATCTCGAGCAGCTATTGAAGATgacagtagcagcagtagtataacaaaaactgagaataaaaacactgaagacGCCATGCGATCACGACAGATTTCAAATCTTGCTGTTGCATTGACCCAAGATGAATCAAGTTCTGAAGAGAAAGTGAAGGTGAAGGATGGGAAACAGAAACCAAAagataacaaaacaaagaaagatgAAAAGCTCCGGTTGTCAGGAGAGAAGATACAGGttagagaagagaaaggtgacATAAAGGTGAAAGATGAGAAGATGAAAGAAGACAAGCCAAAAATACCATTGGaggaagaaaaacaggaagaggcaaagaaatctgacaaaaaaacagaagatgaggagaaggagaagCAAACACGATCCAAAAGTAAGGAGGACATACGGCAGAAGAAGGATACTGTGACCCCAGATCGCCGCCCAAGCGAAAGCCGGACTCCTGTGAGAGAAACAGAGAAGAGAATTCCTTCCCGACccaagaaagaagaagaaatggtTCTTGGTTTAAAGAAACGAGGCCGGAAACGTAAAGACACGGATGAGAAATCCAAGTCAGAGGAAAGTATGGGCCAGTTGGCAAGTCACATATCTGTTGGCATAGGAGACAAGTTGAAAGTTTACTATGGTCCAACGCATGAATCGAAAGTCACATATGAAGCAAAGGTACTAGATATTGAAGAGGATGGAAACAGGAGTGTGTATCTGGTGCATTACACGGGTTGGAACACTCGCTACGACGAGTGGATCAAACGGGGGAGAATTGCTGACAATCTGAGCTGGACTCCCTCTAGAGCCAAACGCCTCAGGCACCAGCAAGCACAAGCACAGCTGAAGGCCTCAAAACCAGTGTTAGGCAAACGAGGTCGACCTTCGGTATGTGGTCGAACACCTGATGTTCCAAATGCACAACAGCCACCCCGCTCTACAACACCGTCCTCAGTGACATCATCATCAAGTCGCACAAAGTCACCAGCAACATCAGCTTCAGTTTCACGGTCTAGTGGTGGCAGTCGTGTTACCCGAAACACTGGTGACCCAAACAACATAGTGTCAGGCCCTGAGTTTCGCAGGCGCACAAGAAGGATGTCTGGACACACAGATATTTCGATGCTATCAGAATCGGAGAGTGAGGAGTATGAGTCTGAAGTAGAGACTGAGGTAGAATCAACGCAAACAAGAAGTAGAGCAGAAAAAAGAATTTTGTTAGCAGAGAAAGAAGAAGCCATTAAAGATGAAGGATCGAAAGAAGATGTGAAGAAACTGGAGAGGCCATTTAGGCGGAAGGCTGgaaagaggaaggaagaagaagatgaagacgaTAAAGACAGTGTAAGAGAAGACGATGGTTTAGAACTTGTTCCAGACACAGATGCACCAAATGAAGTACTTCAAAGTCTAGAGAAAAGGCGAAGCAAACGAACAAAAAAGATGACTGTGACTCCTGCCATTGAGAAGAACCCAGAGGATGAACCTAAAGTTGAGGCTTCTGTAAAACAAGAGCCTGGCGCTGAAAGTGAAGAGGAACAACCAAAAGGGAGAGATTTTGATCTTAATCAGATCAGATCTGAGTTGAAAGGAATTGAAAAAGCTGTAAAGCTGTCACAAGATGTGGTACATCAAACTGAGGAGAAGTGTTCACAGCTAATCCTAGATGACAAGACAGGGCTTATTGATGTTAGGTGCAAGactgaggaggaggaagaggaggagggggaagTGCAGTGCATACTTATGGAAGAGAAGGTTCCAGAAAAGACAGGCGATCCAAACACTGAAGATGTTTACGAGTTTAAGGAACCTGAACCATTTGAATTTGAGGTTCGATCAAAACGGGACACTCTGCTGGATGAAAGGGCTGGTAAACTTAACAGGCGACCGAGGATCTTTGATGATGTTGAgccaaaggaagaaaaaagtcCAAGAAAGAAGCTTATTAGGTCTGCCATGACAAATAAGACTGAGGGAAAAGATGATGTACCATTTGAAGGTGAAGTGAAAAAACGGTTCAGACGTTCTGTCACCAAGAAGGTGGACACAGTTGCAGAATCAAAAAGAATGGACTTAGTACTTGCTGATGAAGTACGACTCTCTCCTGCCAAACCTTTGCCAGTGGAACCATTAACTCCACAGAAATCTCGCCAAGTGTCAGCTTGTGAAGAAGCTTTTAACAAGTTGTGTGAGTCCCCATCATATCATACGTCTACTAAGCAGTGCAAAAACCAAGCGCCTAGCTCACTGGCACCAAAAAGTGTGAAACCTCCAGAACTGGAAACCCTTAGTCTTTTCAGTGAATTGCCAGGTGAGGGGccagatgaaggtgaagatgacaGTGAAGACCGCCTTGTTATATCTGAAACTGACGAAACAGAGACAGAAATGAGGGAACCTTTATTCACATACCCACAACGTCACCATGAAGAACTCTTCCTGACCCTTGTGAGTCCTGAAGCCACTGCTGTGTCTGCTCCTGAATCAACAGTTACACCACCTAAGTTATCCCCTGGTGCACCACAGCTGCTTCCTATGGCAGCAGACACGTTGACAAACTGTGGTTCTGAGAAGAATGAAGAGGTAACTCAAAGAGATGCTGGACATGAAGGGTCAGAGAAGGCAAATGAAAAGTCATCAAGTGTTCGGATGAGTGATGATGTAATGATGCTTTTAAAGGGTGGAGAAGAGGATGATTTTGAAGATGACCCTATCAATGCAGCAATCCAGCGAGTCATTGAGCAGGCCATGACAGATGAAGAATCCAATGACATGGATATATTTGGTGGCAAGAGGTCATCATGTAATTGTGATAACATGCAacaggaagcagttgtggcacCTAAACAAGAGCCTCCAGCTGTCGAAGAACCAAGGAAGGACTCACCGCTGAAGGAGATGGGAAAGAGGAAGACAGGTGGCAGGAAGCCTGTTCTCAGCAAGGAGTTTGTTGAAGATACGGACTCAGACAGTGACAGTAGTGATGCAGAAGAGAGACTTGTGATTGCAAAAAtcgatgaagatgatgacaatATGAGTAGTTCATCAAGCCAGTGCAGTGTGAAACTACGTGGGAATGAATCACCCAACTTTGAACTGAAACTTGAGCCAAGTGATAGGGGTGAGGACAGTGCGACGGAGGCTGAGGAAACTGGCAGCAAACCACAGGTTACCGAAACAACAACGTGTATTACAGCGGTAGTAGAGAAAAATGTTGAAGTCACTGGGAAAGATGATAGGTTGCTAGAAGCAGAAATGGGTCATGGTGTTGACGACAGTGAGAATACAGCTACAGTTAAAACCAATGAAGAAGATGCTCCTGGTGTGCAGGatacagaacacacagaacTTGCAAGTGCTGTTGTGGTGCAGTGTAATTCTTCACCAAAAAATGAAAGTATTTCACTTCCAAAACCAGATAAACTgctggaagaagaaaatgtagaaGTAGCAATGTCTGTAGTGCAGACACCAGTGGAGAAATCAGATGAGGCTGAAAAGTGTGAGGAGGAAGCTGAGAGCAATTTACAGTCATTATTATGTGAGGAGACAATTCCTGGCAGTCCGGCTCCAGCCAGTGATTCTCTGCAGGTTGTTGAATCATGTCGTGAAGAGAGTAAAACACCAGTAATAGAAATGCCATTTGCAAGTGCACCGGGCAGCAATTGTACGTCTAGTTCAAGTAATGGGAAATCATCAGCAGCTGTACCTATTTTTGTTTCGTCTCCAATCATGGAATCTCCTGGAACCATAGTACCAATTACAGTAGATCTGTCAGCTTCTATTCAGATGCACACTGTGACAACTGTGTCTCCTACTATTTCttcaccacccccaccacctcAGGTACAGGTCCAACCCCTTCCAGTCCCAGTTTCAGGTGCAAGTCCAGGCATATCTAAAAGAAATTCAAATGAAGCGGCCCCTGTAATGGATAATACTCCACCCACTACACCTGACAGTAGTCTTTCTACAATATCGGGCTCCCCCAGAGAAGAGCGAGATGGAATGTCACCTACCTTGGATAATGAAAGCTCAAAGTCACATAGAGATTCATTTGAAATAGACCTTGATAGTTGTGCAGAGGGCATCAAAGTGGACCATTACAGTGAAGAAGACTCTCTCCTTAATATTGATGTTTCAAACTCCAGTGAGAACAGGTTAAGAGGTATGAAATTGTCCAAAAAACCCTGTTCTGACCTTGACAAGGAGCTGGAATCCTCACCTAAGAAACGGAGGCGTAGTAGGAAGAGGTCAGACTGTGAAAGTAATAAAAGGTCAAGACACTCTTCTGGGAGATCAGTACGGAGTATTGgaggaggaggaggaggagagggtAGTGGTGGCGGCactggtggcggtggtggtagtgatagTGATGACACATCTGAAAACTCCACTGCCGGTGGTTGTACTCCTTTAACTAATACAGAAACTGTGCTGTCTTCACGGTCGCCTCGACCTTCAAAGTATAATTTCTATGTGGAATTAGatcCTGAATTAGATGGGACACAACGTATTGCTTTGCTGCAACAGAAGCTtcaggaactgaggaaaacttaCATGAACGTAAAAGCAGAACTTGCGTGTATTGACAGGCGGAGAAAGAAACTGAGGCGAAGGGAGCGTGAAGagaaagcaacaaaacaggaAGTGGTGTGTTCGTGA
Protein Sequence
MQPWSRKKGMMGDDPPYLAVGTEVSAKYKGAFCEAKVRKVVRSVKCKVTFKLGLGSAIITDDQIRGTLRVGSVCEVKHPEKKEFVEATINKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRKGRRNRQIHGDDSSDDEDNPRKGKRKEEKEADIGKVVCVELGDKKKQKDNWFPGLVVAPTAQDTVRIRVRDEYLVRSFKDGRYFTVPKKEATEFTREIGAKVDNNTLRTAVEKALLYLDRDELPPHWDRDLLFRMDESSGNSDSDGGFDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINKGPIIGTRDVDLYKLFKVVHKLGGYNRVTNQNQWKTISHKLGFGQGSSSIVNLVKQAYKKFLHSFEDFYRKLGCTMVNHPRGNRSRHRSGRSLIRDRDRATPINPLRDKEKPVTPVVMEKVPEVLEKDNSHTVKKEDEEISVEIEKKEKLEETPKPKLQKKDKHKQKEEKADVPSKEEKKSEKLRVKDLSEASVVIEKSKGKEEKPKTNDTIKDEAEEKTERLRVRETRKDDKGKEVRSRAAIEDDSSSSSITKTENKNTEDAMRSRQISNLAVALTQDESSSEEKVKVKDGKQKPKDNKTKKDEKLRLSGEKIQVREEKGDIKVKDEKMKEDKPKIPLEEEKQEEAKKSDKKTEDEEKEKQTRSKSKEDIRQKKDTVTPDRRPSESRTPVRETEKRIPSRPKKEEEMVLGLKKRGRKRKDTDEKSKSEESMGQLASHISVGIGDKLKVYYGPTHESKVTYEAKVLDIEEDGNRSVYLVHYTGWNTRYDEWIKRGRIADNLSWTPSRAKRLRHQQAQAQLKASKPVLGKRGRPSVCGRTPDVPNAQQPPRSTTPSSVTSSSSRTKSPATSASVSRSSGGSRVTRNTGDPNNIVSGPEFRRRTRRMSGHTDISMLSESESEEYESEVETEVESTQTRSRAEKRILLAEKEEAIKDEGSKEDVKKLERPFRRKAGKRKEEEDEDDKDSVREDDGLELVPDTDAPNEVLQSLEKRRSKRTKKMTVTPAIEKNPEDEPKVEASVKQEPGAESEEEQPKGRDFDLNQIRSELKGIEKAVKLSQDVVHQTEEKCSQLILDDKTGLIDVRCKTEEEEEEEGEVQCILMEEKVPEKTGDPNTEDVYEFKEPEPFEFEVRSKRDTLLDERAGKLNRRPRIFDDVEPKEEKSPRKKLIRSAMTNKTEGKDDVPFEGEVKKRFRRSVTKKVDTVAESKRMDLVLADEVRLSPAKPLPVEPLTPQKSRQVSACEEAFNKLCESPSYHTSTKQCKNQAPSSLAPKSVKPPELETLSLFSELPGEGPDEGEDDSEDRLVISETDETETEMREPLFTYPQRHHEELFLTLVSPEATAVSAPESTVTPPKLSPGAPQLLPMAADTLTNCGSEKNEEVTQRDAGHEGSEKANEKSSSVRMSDDVMMLLKGGEEDDFEDDPINAAIQRVIEQAMTDEESNDMDIFGGKRSSCNCDNMQQEAVVAPKQEPPAVEEPRKDSPLKEMGKRKTGGRKPVLSKEFVEDTDSDSDSSDAEERLVIAKIDEDDDNMSSSSSQCSVKLRGNESPNFELKLEPSDRGEDSATEAEETGSKPQVTETTTCITAVVEKNVEVTGKDDRLLEAEMGHGVDDSENTATVKTNEEDAPGVQDTEHTELASAVVVQCNSSPKNESISLPKPDKLLEEENVEVAMSVVQTPVEKSDEAEKCEEEAESNLQSLLCEETIPGSPAPASDSLQVVESCREESKTPVIEMPFASAPGSNCTSSSSNGKSSAAVPIFVSSPIMESPGTIVPITVDLSASIQMHTVTTVSPTISSPPPPPQVQVQPLPVPVSGASPGISKRNSNEAAPVMDNTPPTTPDSSLSTISGSPREERDGMSPTLDNESSKSHRDSFEIDLDSCAEGIKVDHYSEEDSLLNIDVSNSSENRLRGMKLSKKPCSDLDKELESSPKKRRRSRKRSDCESNKRSRHSSGRSVRSIGGGGGGEGSGGGTGGGGGSDSDDTSENSTAGGCTPLTNTETVLSSRSPRPSKYNFYVELDPELDGTQRIALLQQKLQELRKTYMNVKAELACIDRRRKKLRRREREEKATKQEVVCS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01566759;
90% Identity
-
80% Identity
-