Cven003610.1
Basic Information
- Insect
- Coproporus ventriculus
- Gene Symbol
- nfxl1
- Assembly
- GCA_027574865.2
- Location
- JAODAH020008745.1:1-1912[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 2.4e+04 -4.2 1.9 15 19 32 36 32 36 0.85 2 19 0.12 1.4e+03 -0.2 0.8 4 10 67 73 66 73 0.94 3 19 6.1e-08 0.00072 19.9 17.0 1 19 81 98 81 98 0.99 4 19 1.9 2.2e+04 -4.0 1.1 10 12 124 126 123 128 0.52 5 19 6.8e-09 8.1e-05 23.0 17.2 1 19 134 152 134 152 0.99 6 19 0.4 4.7e+03 -1.9 1.9 6 10 177 181 176 181 0.90 7 19 9.3e-08 0.0011 19.3 7.8 1 18 187 204 187 205 0.97 8 19 1.4 1.7e+04 -3.6 0.6 5 10 229 234 229 234 0.74 9 19 7.7e-08 0.00092 19.6 10.0 1 18 240 257 240 258 0.97 10 19 1.4 1.7e+04 -3.6 0.5 1 4 267 270 267 270 0.93 11 19 0.0011 13 6.3 20.0 3 18 294 309 292 310 0.91 12 19 4.7e-08 0.00056 20.3 14.3 1 18 319 336 312 337 0.86 13 19 1.3 1.5e+04 -3.5 0.9 5 10 365 370 365 370 0.90 14 19 0.00022 2.6 8.6 6.8 10 19 386 395 383 395 0.91 15 19 0.054 6.4e+02 0.9 5.8 1 12 405 415 405 415 0.89 16 19 0.84 1e+04 -2.9 2.7 14 18 443 447 443 448 0.90 17 19 0.058 6.9e+02 0.8 0.9 5 11 461 467 458 468 0.89 18 19 0.49 5.8e+03 -2.2 0.9 10 12 474 476 471 479 0.59 19 19 3e-05 0.35 11.3 6.0 1 11 484 494 484 498 0.96
Sequence Information
- Coding Sequence
- ATGTGCATTCAGAGGTGGTCCAAAGACACTTTAATCCAACAGAAACAAGCACTTGAAGAATatcaaaatagtaaaatacaattaaaatgggGGTGCCCAAAATGTAGGTGTGAATATGGGCCTCAAGATATCCCAAAtggatatttttgtttttgtaagaaaaaagaaaatccgaCTTTTCAACCTTTGATTGTGCCACATTCATGCGGTGAAAAATGCGGGAAGATTTTAGAACCATATTGCGGGCACGAATGCTTGCTTTTATGTCATCCAGGCCCTTGTCCACCATGTCCTAAAATGGTTAAAGTGAAATGTTTCTGTAACTCAggtgaagaaaaatttcaacgcTGTTGTAATAAGGAATGGTCTTGCCATTCTATTTGTAATAAAGTATTGAGTTGTGGGAAACATAAATGCGGGCAGTTGTGCCACCCTGGGGAATGTCCAGCTTGTCCAAAGAAGAGCATGCAGAAATGTTTGTGTGGTGGTTCAGTAAAAATGCGGGATTGTGCTACACCTATTTGGCAATGTGAAAAAGTTTGTGGTAAAGCTTTGGAATGTGGTTTCCATAATTGTGAAGAGATTTGCCATTCTAGTGAGTGTGGTGTTTGCTTACTCTCAAAAGCACGAAATTGTCCTTGTGGGAAATCAACTTATGAACTTCCATGTACTGAAGAAACCCCAACTTGTGGCGATACTTGCAATAAAATCCTTGAATGTGGCATGCATGTTTGTAACCAAAGGTGCCACaaaggaaaatgtgaaatgTGCCTTGAAACTATCACCAAGTCTTGTCGGTGTGGACTGCATATGAAAGAGGTGCAATGTAGGAAACCCTATTTCTGCGAAACAAAATGCAAACAGATGAAAGATTGCTACAAACATCCTTGTAATCGAAAATGCTGTGATGGTTGTTGTCCACCTTGTGAGAAACCTTGTGGACGAACTCTACCCTGTCGGAAACACACGTGCAGTTCCGTTTGTCACCGTGGACCTTGTTATCCATGTAACTTAACCGAGAAAGTTTTCTGTCGTTGTGGGACAACTTTTATTACTGTTCCTTGTGGAAAAAAAAGTCGAACAAAACCTCCAAAATGCCTAAAATTATGCAAtatcCCACCAGAATGTCATCATGAAGCTCGTGAGCCTCACTACTGCCATTTTGGGGATTGCCCTCCTTGTCGCCAAAAATGCAACATTCCATATAAAACTTGCTCtcatttatgcaaaaattcaTGTCATTCTGCTGTGTTAGTTAAAGTGCAAGGGCAGAAAGCTTCTACTCCATGGGAAGAAAAAGGGCCACAAGTTACGAAAAAAGCTATTCCATGTCCAAATTGTGTGGTCCCCATGCCCGTTACATGCTTAggggGACATGAAACTTGTGATTGGCCCTGTCATCTTGCAAGACCTTCAAGTTGTCATAAGCCATGTGGAAGGCTTTTACAATGTGGAAATCATAATTGTACGAAAGAGTGTCACATTGTGGAAGGAGGAACA
- Protein Sequence
- MCIQRWSKDTLIQQKQALEEYQNSKIQLKWGCPKCRCEYGPQDIPNGYFCFCKKKENPTFQPLIVPHSCGEKCGKILEPYCGHECLLLCHPGPCPPCPKMVKVKCFCNSGEEKFQRCCNKEWSCHSICNKVLSCGKHKCGQLCHPGECPACPKKSMQKCLCGGSVKMRDCATPIWQCEKVCGKALECGFHNCEEICHSSECGVCLLSKARNCPCGKSTYELPCTEETPTCGDTCNKILECGMHVCNQRCHKGKCEMCLETITKSCRCGLHMKEVQCRKPYFCETKCKQMKDCYKHPCNRKCCDGCCPPCEKPCGRTLPCRKHTCSSVCHRGPCYPCNLTEKVFCRCGTTFITVPCGKKSRTKPPKCLKLCNIPPECHHEAREPHYCHFGDCPPCRQKCNIPYKTCSHLCKNSCHSAVLVKVQGQKASTPWEEKGPQVTKKAIPCPNCVVPMPVTCLGGHETCDWPCHLARPSSCHKPCGRLLQCGNHNCTKECHIVEGGT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -