Basic Information

Insect: Coproporus ventriculus
Gene Symbol: RREB1
Assembly: GCA_027574865.2
Location: JAODAH020014238.1:2652-9545[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00048 0.046 14.6 0.9 1 23 108 130 108 130 0.96

2 16 0.00028 0.026 15.3 0.4 1 23 143 165 143 165 0.98

3 16 4.8e-06 0.00045 20.9 4.3 1 23 171 193 171 193 0.99

4 16 0.76 72 4.5 0.1 1 21 248 269 248 272 0.71

5 16 1.2 1.1e+02 3.9 3.5 2 23 278 300 278 300 0.88

6 16 1.4 1.3e+02 3.7 1.0 1 11 347 357 347 366 0.78

7 16 0.028 2.6 9.1 0.2 1 23 487 509 487 509 0.98

8 16 6.8e-06 0.00065 20.4 0.8 1 23 518 540 518 540 0.99

9 16 0.0007 0.066 14.1 3.1 1 23 546 569 546 569 0.97

10 16 0.00059 0.056 14.3 2.8 1 23 913 936 913 936 0.96

11 16 0.00041 0.039 14.8 0.4 2 23 1151 1172 1150 1172 0.97

12 16 0.11 10 7.2 6.3 1 23 1178 1201 1178 1201 0.97

13 16 0.042 4 8.5 4.3 1 20 1228 1248 1228 1252 0.95

14 16 4.6 4.3e+02 2.1 5.5 1 23 1302 1325 1302 1325 0.84

15 16 0.014 1.3 10.0 0.4 3 23 1372 1392 1370 1392 0.93

16 16 0.0063 0.6 11.1 5.9 1 23 1398 1420 1398 1420 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00048	0.046	14.6	0.9	1	23	108	130	108	130	0.96
2	16	0.00028	0.026	15.3	0.4	1	23	143	165	143	165	0.98
3	16	4.8e-06	0.00045	20.9	4.3	1	23	171	193	171	193	0.99
4	16	0.76	72	4.5	0.1	1	21	248	269	248	272	0.71
5	16	1.2	1.1e+02	3.9	3.5	2	23	278	300	278	300	0.88
6	16	1.4	1.3e+02	3.7	1.0	1	11	347	357	347	366	0.78
7	16	0.028	2.6	9.1	0.2	1	23	487	509	487	509	0.98
8	16	6.8e-06	0.00065	20.4	0.8	1	23	518	540	518	540	0.99
9	16	0.0007	0.066	14.1	3.1	1	23	546	569	546	569	0.97
10	16	0.00059	0.056	14.3	2.8	1	23	913	936	913	936	0.96
11	16	0.00041	0.039	14.8	0.4	2	23	1151	1172	1150	1172	0.97
12	16	0.11	10	7.2	6.3	1	23	1178	1201	1178	1201	0.97
13	16	0.042	4	8.5	4.3	1	20	1228	1248	1228	1252	0.95
14	16	4.6	4.3e+02	2.1	5.5	1	23	1302	1325	1302	1325	0.84
15	16	0.014	1.3	10.0	0.4	3	23	1372	1392	1370	1392	0.93
16	16	0.0063	0.6	11.1	5.9	1	23	1398	1420	1398	1420	0.98

Sequence Information

Coding Sequence: ATGCGCCTTATCACTGATCAAATATACATTGTTGCAGGAGATAATTACGAAATGCAAGGTGTAGTTTGCATGCCCCCGCAGGAATTCACCAGGAGGACCGTAAAGAACGGCGaggaggaagaagaagaagaggatCGCCAAATTCATGaaacaaAGATGGATTTGAAAATGGAGCCAATAACCAAAGATGTAAACCAAAGCGACTCGGGGATTTTTTCAGCCACAGCAAACTCAGATGAACCACTAAATGCTTCAAGTCGAACTCACCATTCTGAAAATGACACCGACAACAGATCAGATTGTAGTACTCCGGACCGCAAATATCTCTGCCCAATCTGTGAAACTATGTTATCATCGCAACATGAATTTACACTTCATATACGTTCCCATAACAATGATTCGGAAGCCCAAGATCCGGAAAAAGGCTATACTTGTCGGATTTGCTTCAAAGTGCTTAGTTCGAGTTCGAGCTTGGACCGCCATGTTCTAGTCCACAGCGGTGAACGTCCATTCACTTGCAAATATTGTGGGGATACTTTCACCACGAATGGAAACATGCATCGCCACATGCGCACACACAAAACGGAAAATTATGAATCTGACGGAAGCACAGATAGCAACGTAAGTTCAGGTTCTAAAGGCATTGAAttcaataataacaaaattgataaatatgaGAATAAACGGAAGCTTGAAGATGATTACAAAATACCTCGGAAAAAAGCTCATTATGAGGATAGTTTTAAATGTCCTATTTGTGACCGTGATGATTTCATCAACATAAAATCACTAGAGGTGCATTTAGAGGATAACCATCCAGATTATCCAGCAAAATGCCATCAGtgcaaccaaattttcaaaaacaacaaaattctaAACTTCCACCGCAACACTGTTCATGCAgatgaaaatggaaagaaacCCTCGGTTGTTGGATTTAAAGATCTCACTTTCGTTGATTTTAGTAGCGAAAAATTTCCACACATAGCCCGATACGAATGCGAAAAGAACCTACACAAATCTTCCACcggtttaaaatttgtatgttcCAAATGCAATCGTGCCTTCCCTTGCGATAAAAGCTTGGAAATTCACAGTACAGATTGCGGGACTTTAGATTTAAGTTTAGAAAACAACTCACCTAGAGTTAATGATAGCGAAATTCGAAGAAACGATTTCTTCAGTCGATTAGATCTGCAAGATAATTCTCCTAAATTAAGTACGAATTTTGAATCACCAAGAAAATTACAACAGAGACTTTTGGAAACAATGAAATCCATAGATAGCAGTAAAGATTTAGCTGATATTCAAACCATTATCTCCATGACTACAAATGGAAGCTTATTGCAgcatttacaaaataagaataatgataataatgagACTGAAAaaacagaagaagaagaatccCAAGATCTTTTTGCGCAAGAATTtcgtaaaatgaaattacgtGGTGAATTCCCTTGTAGGTTATGTACTGCAATCTTTCCAAATTTACGAGCTTTGAAAGGGCATAATCGGACCCACCTTAACAGTACCAGTAATGGTACTTATAGGTGCAATATGTGTCCTCATTCATCTATAGATAAAGCTGCACTAATCCGACATATGAGGACACATAATGGAGACCGTCCTTATGAATGTTCTTTATGTAACTATGCTTTCACCACCAAAGCTAATTGTGAACGCCATTTACGCAATCGGCATGCTAAAAGTACGAGGGAGGAAGTTAAAAAGTCTATAATCTACCATCCTTCTGAAGATCCAACAAATGAAGACATAACCAAACAATTAGAagccaaaaaattaaactctAGTATTAATAGTATTGATTCGAATGATTTAACTCCTGAAAAACTCCGAAGTTCTACACCGAAAAACTACTCAGAAAAAGATTTTGCATCTTTAATTCCTCTAACCTCTAAACTTCAAGCCCTCAAAGATCTCACCCCTAAACCTTTTGAATTATTACCTAAAGAACCTCTTTCACCCTACCTAGCCCCTCAAATGAATTTCACTCCTAAATTTAACAATACCTCAACTCCTCACAAAGCAAAAATTCAGGTTAAAAACCTTCAAACCTTAAAAGAATCTGAATATAATTATTCAGAGGAAGAAGATGAAATTCAGGAAGAAGAACCTATGAATCTAGTCCTAGatttaagtaaaaagaaaaatgataaaccACCTCCTGAAGAAATTCCAGAAGATTTAACGAAGAGAAATGGAGAGAACATCATACCTCCTAATATGAGCGAAATTTTGGCACAACAGTTACTTAAAAATACCCCGAAAATCGATCCGTCTGCATTGTACGCCTCACAATTAGCATTTTACAGAAACAGCTTCCCGAACTGGCCGGCTTTTCCAATAAATCCATTACTTTTCCAAACCATGCAACCTCCTCTTCTACAAGACCCACAAGATGTGAAAGAACGCCTGCAACGTTTACAACTTTGCGGTGGTGGAATGATCATGGATAATTTTGCTGAACGCTTAAAAACCTTCTACCCACCTTCTAATTTTCCCGCATTTAAAGATAAACCTCCAACTCCTCCAAAAACCGAACCGCTTTCTTTAAATATCGaaccaaattttaatgataacataaaaatgaagagtCCATTAgcacaaaaatctgaaatgCTCCAATCCCCAAATTCTGTCAAAATGGTAATTAAGAATGGAGTTTTAATGcccaaacaaaaacaaagaagATACAGAACTGAACGTCCCTTTTCATGTGAACACTGTTCTGCTCGATTCACTCTTCGTTCTAACATGGAAAGACATATAAAACAACAACATCCACAATACTGGTCACAACGACAAAGATCTTCGGTTGGAAATCCGGGACGTAAACCTCATCTCCTCCcaccaacaattaaaaattctttatgcGAACTTAGTATTCCAAATTATGAGGTTCCAAAAATGCAGGAATTTGAAGAAACAAAAGATAATACGATttctgataaattaaaatacgcCATCTTAGCTCAACATTTACGTGCTGCTCAGGaaactaaaaaagaagaagacgAAGATTGTGCTTTGGTTATTGATGAGAATGATGAAAATCCCAAAAATGATTGTTATGAGGGTAAAACTAATATTCTTGAAGAGAAATTGAAGGAATTGCGTGAGAAGCAATTGATGCATGAAAAAActcgtgaaaataaaataaagaatgaagATGGACAAGATTTGGTACCTGTTTCTCGATTGTTGGATAATGCTACTCTACAACCGTTCAAAGAGTACTTTAGAAGAGAAGGGGAAGAGCATGAAGGTGAAGGGATTAGCGAGGAGGATGAAGAAGGTCTGGTGGCAAGTGGTAGTACCAGTGAGGGAAATTCAGGAACAGATGAAAATAGGTCCGAAAGTGATAATCCAACCAATCCAccgatgaaaaaaaaatctgcttATTCTTTAGCACCAAATCGTGTCAGTTGTCCATATTGCAGCAGAAAATTCCCATGGACATCTTCTTTACGCCGCCATATTTTAACCCATACAGGACAAAAACCGTTCAAGTGCAGCCATTGCCCCTTACTCTTcacaacaaaatcaaattgcgACCGCCATTTATTGCGAAAACATGGAAACTCAGCAACCACAATAAGCAACgaaaatgttaataacaacaattttatgatGAGAAATGTGCCGGAGAGACCttttaaatgttcaaattgTCCCAGCAGCACATTCTCaacttattcaaatttaaaaaagcacaTGATTTGTAAGCATGGAGTACAAGATGATCGGCAAGGTTACGAAGCTGGAAGTAGCGAAGATGAAAAAAACAACAGTGATCAAAAAAGCGATTGGGAAAATCAAATTGCGCATACTAAATCAACAACAAACGAAAATCAAGTGCAAAATTCGGATTTACcatttaaatgtcatttgtgCGATCATTCGTTCGGGGAGAGACAAGATTGTTTGGATCACATCAAAGATAAACATGATTCTGAATATAAGTTGCTTATGGCAAAAAATGCTTTAGATGCAAATGCTTCGACTCCGGATGAAAGTGGAAATCATGAAGATGAAGATAATGAGATTCGTGGAAAATTTCCAGATTATTCGAATCGGAAGGTAATTTGTGCTTTTTGCATGCGCCGATTTTGGTCTGCGGAAGATTTAAGGAGGCACATGCGCACACATACAGGTGAGCGCCCTTTTAGTTGCGATATATGTCGACGCCGATTTACTTTAAAACATAGCATGTTGCGCCATCGAAAGAAGCATAATGTTGCTTTCGATAACGATCCTGCGCAAAGTGATGAAGATGGCAATAACTTATCCCTcgaaaaattatgcaaaacaaCCGATAACAACAatctaatcaataaattaaatgaacggACTGACGAGTCTGACGGTAATGAAGGTGGTAGCGATTTAATAAGCAATTTGTTAGGCATTAGGGATCGTTCAATAATAGAACAAGTATTAACAGCATCTGCAGATGATGCTGCAAAACTATTAGGTGTTGGAGGGCaggaataa
Protein Sequence: MRLITDQIYIVAGDNYEMQGVVCMPPQEFTRRTVKNGEEEEEEEDRQIHETKMDLKMEPITKDVNQSDSGIFSATANSDEPLNASSRTHHSENDTDNRSDCSTPDRKYLCPICETMLSSQHEFTLHIRSHNNDSEAQDPEKGYTCRICFKVLSSSSSLDRHVLVHSGERPFTCKYCGDTFTTNGNMHRHMRTHKTENYESDGSTDSNVSSGSKGIEFNNNKIDKYENKRKLEDDYKIPRKKAHYEDSFKCPICDRDDFINIKSLEVHLEDNHPDYPAKCHQCNQIFKNNKILNFHRNTVHADENGKKPSVVGFKDLTFVDFSSEKFPHIARYECEKNLHKSSTGLKFVCSKCNRAFPCDKSLEIHSTDCGTLDLSLENNSPRVNDSEIRRNDFFSRLDLQDNSPKLSTNFESPRKLQQRLLETMKSIDSSKDLADIQTIISMTTNGSLLQHLQNKNNDNNETEKTEEEESQDLFAQEFRKMKLRGEFPCRLCTAIFPNLRALKGHNRTHLNSTSNGTYRCNMCPHSSIDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKSTREEVKKSIIYHPSEDPTNEDITKQLEAKKLNSSINSIDSNDLTPEKLRSSTPKNYSEKDFASLIPLTSKLQALKDLTPKPFELLPKEPLSPYLAPQMNFTPKFNNTSTPHKAKIQVKNLQTLKESEYNYSEEEDEIQEEEPMNLVLDLSKKKNDKPPPEEIPEDLTKRNGENIIPPNMSEILAQQLLKNTPKIDPSALYASQLAFYRNSFPNWPAFPINPLLFQTMQPPLLQDPQDVKERLQRLQLCGGGMIMDNFAERLKTFYPPSNFPAFKDKPPTPPKTEPLSLNIEPNFNDNIKMKSPLAQKSEMLQSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQYWSQRQRSSVGNPGRKPHLLPPTIKNSLCELSIPNYEVPKMQEFEETKDNTISDKLKYAILAQHLRAAQETKKEEDEDCALVIDENDENPKNDCYEGKTNILEEKLKELREKQLMHEKTRENKIKNEDGQDLVPVSRLLDNATLQPFKEYFRREGEEHEGEGISEEDEEGLVASGSTSEGNSGTDENRSESDNPTNPPMKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNSATTISNENVNNNNFMMRNVPERPFKCSNCPSSTFSTYSNLKKHMICKHGVQDDRQGYEAGSSEDEKNNSDQKSDWENQIAHTKSTTNENQVQNSDLPFKCHLCDHSFGERQDCLDHIKDKHDSEYKLLMAKNALDANASTPDESGNHEDEDNEIRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHNVAFDNDPAQSDEDGNNLSLEKLCKTTDNNNLINKLNERTDESDGNEGGSDLISNLLGIRDRSIIEQVLTASADDAAKLLGVGGQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -