Basic Information

Insect: Coproporus ventriculus
Gene Symbol: -
Assembly: GCA_027574865.2
Location: JAODAH020038779.1:445-2873[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.1 9.7 7.3 0.1 2 23 155 177 154 177 0.95

2 12 1.1e-06 0.0001 23.0 1.4 1 23 207 229 207 229 0.98

3 12 4.5e-07 4.3e-05 24.1 1.5 1 23 235 257 235 257 0.99

4 12 2.2 2.1e+02 3.1 1.6 3 23 270 288 269 288 0.82

5 12 1.3e-05 0.0012 19.5 0.5 3 23 306 326 305 326 0.99

6 12 2.3e-05 0.0021 18.8 4.5 1 23 332 354 332 354 0.98

7 12 5.2e-06 0.0005 20.8 1.8 1 23 360 382 360 382 0.97

8 12 3.1e-05 0.003 18.3 6.4 1 23 387 409 387 409 0.98

9 12 1e-06 9.7e-05 23.0 0.8 1 23 415 437 415 437 0.96

10 12 2e-06 0.00019 22.1 2.4 1 23 443 465 443 465 0.98

11 12 0.00012 0.012 16.4 5.7 1 23 471 493 471 493 0.98

12 12 2.7e-06 0.00026 21.7 0.4 1 23 504 527 504 527 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.1	9.7	7.3	0.1	2	23	155	177	154	177	0.95
2	12	1.1e-06	0.0001	23.0	1.4	1	23	207	229	207	229	0.98
3	12	4.5e-07	4.3e-05	24.1	1.5	1	23	235	257	235	257	0.99
4	12	2.2	2.1e+02	3.1	1.6	3	23	270	288	269	288	0.82
5	12	1.3e-05	0.0012	19.5	0.5	3	23	306	326	305	326	0.99
6	12	2.3e-05	0.0021	18.8	4.5	1	23	332	354	332	354	0.98
7	12	5.2e-06	0.0005	20.8	1.8	1	23	360	382	360	382	0.97
8	12	3.1e-05	0.003	18.3	6.4	1	23	387	409	387	409	0.98
9	12	1e-06	9.7e-05	23.0	0.8	1	23	415	437	415	437	0.96
10	12	2e-06	0.00019	22.1	2.4	1	23	443	465	443	465	0.98
11	12	0.00012	0.012	16.4	5.7	1	23	471	493	471	493	0.98
12	12	2.7e-06	0.00026	21.7	0.4	1	23	504	527	504	527	0.96

Sequence Information

Coding Sequence: atggaaaattctgAATATTACACccttaatttgtatttagtaTGTAGAGTTTGTTTGTACCAACAGGAAGGAATGATTGATATCTtaggaaatgaagaaaatgaaagaaattccTACAATATGTTTTCTTCAATTACAAACTTTGAGCTAGAAAAATTAGCAGATATTCCATTTTATCTTTGCAAAATGTGTTTAGAGAAAACAGGAATAAGTTACCAGTTTATACAACAAGCTAAAAAATctcatgaattaattaaatcatatttcGACAATCAGGTGCAAGAAGAGAGAAGTGCAGATAAAgcggaaaattcaaattcttaCGACAAGGAAGAGGAGCAAGatgaaattttggatttaCCTGAAAAATTAGATGATGAGTCAAATTCGAATCGATTAGAACTGTTCCCAACTGGTGCAATTAATAATGCGATCGATCGACTCAAAGAAAATGTACAAATGGAATGTTTAGAATGTAGATTTGTGGCTGTTAATCGTAGAGCTCTTTCAGCTCACATGACTCGCCTGCATAGgGAAATACGTGAAAAATGGTGTCCCCAATGCAATcaaatttacgattttttagATGAGCATATgaaagaacataaaaataaaaattttgtttgcgaATTTTGTGGAAAAGGATTTAATTCAAAAGGACATCTAACAGGACACCTACGCAGCCATTCagatacaaaatgttacaaatgtgaaatttgtaaaagaacCTTTTCGACGTTAAGCGTTTTAAAAGTTCATTTACGCCGACATTCAAATACACGTCCttcAACGACTCCTCGGAATTTTTGTTCGGAATGTAACCGAAAAGTTCGAAGTTTATGGAATCATATGAAGAAGATTCATGGGAAGGGAGAGAGTATGCATGAAGCAACAAATGATTTGGAACCGAAATTGTGTAATATTTGTGGGAAGCAACTGAAGACAAATGCAAAATTGAATCTCCATATGAGGATACATACAGGGGAAGCTCCTCATAAATGTCCTTACTGTGATAAGAGGATGAGGACTAGAAATCATCTTGTGGTTCATATAAGAACACATACAGGAGAAAAACCACATATTTGCCATGTTTGTGGAAAGgGTTTCGCACAAACAAGTGTACTCAACACTCATATGCGTTTACACACTGGACGTCCTCATAAATGTCATATTTGTAAACAAGGATTTTGCAGACCAGCCGAATTGAAGCTACATTTGCGAAAACATACAGGTGAAAAACCGTATTTATGTACTGAATGTGGTCAAGCATTCGTTCAGCGTAGCCATCTGATGGAACATGCTCGTACCCATAGTGATGAACGCCctttcaaatgtaaatattgcgaGAGaggttttaaacaaaattcttcTTTGAAAACGCATGAACAAATTCATCTAGgttataaaCCTTATAAATGTAGCCAATGTTCATATTCATGCAGGCAAAGTTACAGTTTAACTTTACATATGAAACAACATGCGAACGATGCACCTCAACCTAATAATCCATATGATTGTGAAATGTGTAATCGTAGTTTTAGCACTCAAGCGATGTTGAATTCGCATATAGGGACAACACATTCAAACGGTTGA
Protein Sequence: MENSEYYTLNLYLVCRVCLYQQEGMIDILGNEENERNSYNMFSSITNFELEKLADIPFYLCKMCLEKTGISYQFIQQAKKSHELIKSYFDNQVQEERSADKAENSNSYDKEEEQDEILDLPEKLDDESNSNRLELFPTGAINNAIDRLKENVQMECLECRFVAVNRRALSAHMTRLHREIREKWCPQCNQIYDFLDEHMKEHKNKNFVCEFCGKGFNSKGHLTGHLRSHSDTKCYKCEICKRTFSTLSVLKVHLRRHSNTRPSTTPRNFCSECNRKVRSLWNHMKKIHGKGESMHEATNDLEPKLCNICGKQLKTNAKLNLHMRIHTGEAPHKCPYCDKRMRTRNHLVVHIRTHTGEKPHICHVCGKGFAQTSVLNTHMRLHTGRPHKCHICKQGFCRPAELKLHLRKHTGEKPYLCTECGQAFVQRSHLMEHARTHSDERPFKCKYCERGFKQNSSLKTHEQIHLGYKPYKCSQCSYSCRQSYSLTLHMKQHANDAPQPNNPYDCEMCNRSFSTQAMLNSHIGTTHSNG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -