Cven013679.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Coproporus ventriculus
Gene Symbol
ZNF236
Assembly
GCA_027574865.2
Location
JAODAH020032874.1:14297-20214[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 0.99 94 4.2 1.3 2 23 125 146 124 146 0.95
2 22 0.0092 0.87 10.6 1.4 1 23 152 174 152 174 0.98
3 22 9.8e-06 0.00093 19.9 0.3 2 23 180 201 180 201 0.97
4 22 0.015 1.5 9.9 0.8 1 23 207 229 207 230 0.96
5 22 0.14 13 6.8 0.6 1 23 242 264 242 264 0.95
6 22 0.0018 0.17 12.8 7.1 1 23 288 310 288 310 0.98
7 22 1.1e-05 0.001 19.8 1.4 1 23 316 338 316 338 0.97
8 22 0.0054 0.51 11.3 0.8 1 23 344 367 344 367 0.92
9 22 0.014 1.3 10.0 5.0 1 23 377 400 377 400 0.96
10 22 3.8e-07 3.6e-05 24.3 0.6 1 23 481 503 481 503 0.98
11 22 4.7e-05 0.0044 17.8 5.4 1 23 509 531 509 531 0.98
12 22 0.064 6.1 7.9 0.5 2 23 537 558 536 558 0.96
13 22 2.8e-05 0.0027 18.5 3.5 1 23 614 636 614 636 0.98
14 22 0.00019 0.018 15.9 3.2 1 23 642 664 642 664 0.98
15 22 2.8e-05 0.0026 18.5 2.9 1 23 670 692 670 692 0.98
16 22 0.0023 0.22 12.5 4.1 1 23 698 721 698 721 0.96
17 22 1 96 4.1 6.3 1 21 1022 1042 1022 1043 0.91
18 22 0.00091 0.086 13.7 1.3 3 21 1089 1107 1087 1110 0.88
19 22 2e-06 0.00019 22.1 3.1 2 23 1117 1138 1117 1138 0.97
20 22 6.8e-06 0.00065 20.4 1.8 1 23 1144 1166 1144 1166 0.97
21 22 0.0091 0.86 10.6 6.7 1 23 1174 1196 1174 1196 0.98
22 22 0.00075 0.071 14.0 4.3 1 23 1202 1224 1202 1224 0.98

Sequence Information

Coding Sequence
ATGGAAAAAGAAATAGCACAAGAAGATGAAACTTTTGGTTTCTTAACTATTCCTTTGGAGGCACTGCAAAGATATGCAGAAACTTTAACGATCCCAGAGaatgcaataattaaaaattttatacttgaCGGAAGCGAGttGTTAAATGTGGAAAATGTTATTCCACAAAATGaatgtattattattgcaCCTCAATCACGAGAAAAAGTCAACAATATTGTGGATAAGCAACATACAGCAGTACGATCAATCGTCCCAAATAACACAAATAATCAAAACGGAGTtcgttatttaaaatgtaaagtgtCACAACCAGTTGTGAAAACACCAgttataaaaaagagaaacaaaCCTCCGGATAAATCACCGATTAAATGTTCATTGTGTACTGCcacttttaataaagtaactCAATATAGGTTTCATATGCAGGAACAtagaaatatgaagaaatataaatgtgaaTATTGTGCGGCTAGTTATAATGTCGaatgtaattttaagttaCATATGGCGATGCATGTTAAAGGAGATCCAACTTGcccaatttgtaataaaaaatttcaaagactTGCCAGTTTGAAAGCGCATTTGATGGTTCatgaaattgatgaaatgTTTACTTGTAGTGAATGTTTAGTGGAGTTTGAAATAgaagATGATTTGTATAAGCATCTTCAAACTCATCATAAACAGGCTGTTTCAAGATATTCTGAGATACCATATATTTGttcatattgtaattatttattccaaGAAGCTGATAAGTACAAGGAACATGTTTCTCTTCACATGAAggcAAAGAAATTGGTTAATAATCGATTTAAACGGCGAATTGTGCATTCGAATAAGGAATACCAACATAAATGTGACCATTGTTCGAAGTCTTTCCCAAAAGTTTGTTTACTGGAGAGACATAGGAGAATACATACAGGAGAAAAAccatttatttgTCATATTTGTAATCGTGGTTTCAGTCAAAAAGGTACTCTTCAGATTCATTTGGATAAACATAATGGAAAGAAACCTTTTGAATGCATTTTTTGTACAGCAAAATTTTCGCAAAAAgGTAATTTGAGAGTACATTTGGAGAAAACTCATACTGCTGGAGATCCCGGGGAAAAACTCTACAAGTGCACTCATTGTACTTGTATCTTCAAAACAATTTCCTCATTGAATGGTCATGTAACTAAAATGCATTCGACCTCTCTAAGGGAAAGCAGCACTGACATCGCAATACTTATAGaccaattaaaagaattagatAAACAAAGTCAGCCACCCATTAGTAAGAATatggaaattaatgaaactgtTGAAAAACAAAGTCAGGACaaggaaaattcaaatgaatcgTTTGTAAAATTAGCAGAATCAAGATTAGATGGTGAAATAAGGCGATATGTAGTTAAGCAAAGATTTTCAGGAGAGATTCGATGGTATATTTGTTCATTTTGCAATAAGGAATTTAAGAAGCCATCAGATTTAATCAGACATATAAGGATACATACCAAAGAAAAACCTTTCAAGtgTGCAGATTGTGGCCAATGTTTTGCCCATAAATCAACccttaaaaatcattcaaCGACGCATTTAAAGCAAGATATCGAATGTGGAATttgtttgaagaaatttaattctacACGGATATTAAATGTGCATTTAAAGAAACATGAAAATCTGAAAGTGCACTCTACTACTATGAGCCAAGATTCAAAATGtgatgttaatttaatactgAAACAGCCATTAATTGAGACTGAAAATGGATTGTTTTCCGTACCAGCTCCTAGACCTAAAGTTCCTTATGTAACAATGGAGCAGTATAAAAATCGGCCGCATAAATGTACCATATGCAATGCAGGTTTTACAAAATTAGTGCATTTGAATAGGCACATGTTGACACATACTGGTGCTAAAGAATTTCAATGTGAATTGTGTTTAAAgtgctTTACAACTTCCTATGCCGTAAAGGAGCACATGAATTATCatacaaaaactaaaaagtacgaatgtaaatattgcaaGAAAAGATTCTACACAAATTCTATATTAAAACggcatattttaatgcataGCTCTCAAAAACCGTATATCTGCCCTTACTGCAAGAAACGCTTCAAACAGGCACAGTTTTGCAGAAAACACATAAGACTAATACATAAACGGGATCTTAGTGATTCAATTGTAGCTTTAACAGAAACtggtgaattaaatttaaacacaaaaattattgatctCTCAGATGCAATTGACGATGCAGCATTTACAGATTTAAACACAAACGGGATCGAAACTATGATGTCTCCGATACAAACTTATAATAATACTTCAACAGttgaatcaaaaattataaacaaagaaaattgtagtACAACTGAAGCAACTAAAGTATTACAAGGGGAAcatttggattttattaataaagaatcATCCCAAATTGAATTGCAGATTCCTgaaacaCAATTGAGAGAAGGAACTGATATTCCAACAATTGATGTTTCTCAAATTGGGATTGAGAATTTACAGGATGCTCCAGGTGCAAATTACCCGATTTACATTACACAAGAAGAGTTTCTTCtgttaaacaattcaaatgttGTAAATTCATTCCttccacaattaaaattacagaatacTGATCCGTTACTTTTAAGTTCTATTAATGAACTTCAAGacgcaaatattttatacccTTTAGATCCTTCAATCACAATCGATGAAAGTGATCAACAGAATTATGAAGCTTTTAATCCAAATTTAGTTTTCAATTCAAGTATTtccgatttaaatttaacaattacaaatgaaaaagaacaaactgataaagaaattgtttcttaCGAACCTGAACAAATTGATTtggaattaaatcaaatagcTACTCAAAAAGCCAATGGAGCAATCGAAGATAGTTTGATAGTTTTAAACGAGGGGCAGAAGGAATtgagttattttaatataaatctttcaaatagcgatttaattgatattaatacGTTAAATTTACCTGCGAATACTTCAATTGGTACTGTAATGCAAGCTGCTAATTTAGGggaacaatttttatgttcaaattgtaattgtaaatttaagaatatGCAGCAATTGATGCAGCATACTTGTaaggaaaaagaaagtttaaatgAGCATTCTAAAGTTCAGAAGAAGGGAAACAAATATGAAgATCCAAAGAAATGTCAAGGAAACAGACTTACAAATATATCAGAGACCAAAATAGAAGATCCTGCAGTTGATATAATATGTAATCGATGTGATAAGGTTTTTCACAGTAAATCAGCTTTACTGAGGCATAATTCTGCTAAACATAAAGAAACATTGAATAATAGTTGTAAATATtgtgaaaaacaatttaagaagCGATCAGATTTAgaGCGACATCTTCGTACCCATACAGGTGAGAAACCGTTTGCTTGTGACAAATGTGAAAAAaggttttctttaaaatcaactTTAATGTCACATCTTCGTACCCACAATCCAATTGTAACCAAAGATTTCAAATGCACAACTTGTAATCAGTTTTTTAGTTGTAAATCCAGTTTGAAAACGCACATGTTTATCCATACAgatgaAAAACCATTTAGTTGTAATATATGTCCAGCTAAATTTCGAAATGCTCATCATAAGAAGAATCATATGTTATCACATGGTCTACAGAATTTAATTGTGCAAGAACAAAATCTTACGAATGAAGTGATTTTACAGGAAACTAATGAAGTTCAAGATGagttacAACAAGCTACTCAAAACTTGATAGCCAATGAACTTCCAATAACAGACCCCCTTGAGCAGAATGAACCCATACAGATTGATCCATTACTCCTTCAACTTCAATCAGGAAATTGCCCATTAAGTCTCCAACTTGAAATTGATGGCCAGTTAATCAACATAAAACCTGCTGATTATAATATAGAGATACTTAGAggcaatttaacaaatttaaatgaaaatgtcattGAAGAAGAAGTTGTGAAAAAGCAAACAAAAGACAAAAAAgatacataa
Protein Sequence
MEKEIAQEDETFGFLTIPLEALQRYAETLTIPENAIIKNFILDGSELLNVENVIPQNECIIIAPQSREKVNNIVDKQHTAVRSIVPNNTNNQNGVRYLKCKVSQPVVKTPVIKKRNKPPDKSPIKCSLCTATFNKVTQYRFHMQEHRNMKKYKCEYCAASYNVECNFKLHMAMHVKGDPTCPICNKKFQRLASLKAHLMVHEIDEMFTCSECLVEFEIEDDLYKHLQTHHKQAVSRYSEIPYICSYCNYLFQEADKYKEHVSLHMKAKKLVNNRFKRRIVHSNKEYQHKCDHCSKSFPKVCLLERHRRIHTGEKPFICHICNRGFSQKGTLQIHLDKHNGKKPFECIFCTAKFSQKGNLRVHLEKTHTAGDPGEKLYKCTHCTCIFKTISSLNGHVTKMHSTSLRESSTDIAILIDQLKELDKQSQPPISKNMEINETVEKQSQDKENSNESFVKLAESRLDGEIRRYVVKQRFSGEIRWYICSFCNKEFKKPSDLIRHIRIHTKEKPFKCADCGQCFAHKSTLKNHSTTHLKQDIECGICLKKFNSTRILNVHLKKHENLKVHSTTMSQDSKCDVNLILKQPLIETENGLFSVPAPRPKVPYVTMEQYKNRPHKCTICNAGFTKLVHLNRHMLTHTGAKEFQCELCLKCFTTSYAVKEHMNYHTKTKKYECKYCKKRFYTNSILKRHILMHSSQKPYICPYCKKRFKQAQFCRKHIRLIHKRDLSDSIVALTETGELNLNTKIIDLSDAIDDAAFTDLNTNGIETMMSPIQTYNNTSTVESKIINKENCSTTEATKVLQGEHLDFINKESSQIELQIPETQLREGTDIPTIDVSQIGIENLQDAPGANYPIYITQEEFLLLNNSNVVNSFLPQLKLQNTDPLLLSSINELQDANILYPLDPSITIDESDQQNYEAFNPNLVFNSSISDLNLTITNEKEQTDKEIVSYEPEQIDLELNQIATQKANGAIEDSLIVLNEGQKELSYFNINLSNSDLIDINTLNLPANTSIGTVMQAANLGEQFLCSNCNCKFKNMQQLMQHTCKEKESLNEHSKVQKKGNKYEDPKKCQGNRLTNISETKIEDPAVDIICNRCDKVFHSKSALLRHNSAKHKETLNNSCKYCEKQFKKRSDLERHLRTHTGEKPFACDKCEKRFSLKSTLMSHLRTHNPIVTKDFKCTTCNQFFSCKSSLKTHMFIHTDEKPFSCNICPAKFRNAHHKKNHMLSHGLQNLIVQEQNLTNEVILQETNEVQDELQQATQNLIANELPITDPLEQNEPIQIDPLLLQLQSGNCPLSLQLEIDGQLINIKPADYNIEILRGNLTNLNENVIEEEVVKKQTKDKKDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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