Basic Information

Insect: Coproporus ventriculus
Gene Symbol: -
Assembly: GCA_027574865.2
Location: JAODAH020014786.1:2062-4679[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.017 59 4.2 0.7 24 43 43 59 39 60 0.77

2 11 6.6e-05 0.22 11.9 0.2 13 43 73 100 68 101 0.90

3 11 0.01 35 4.9 4.5 12 39 153 177 148 181 0.78

4 11 0.063 2.1e+02 2.4 0.5 15 29 184 198 178 210 0.82

5 11 0.00085 2.9 8.4 2.5 17 40 214 234 199 238 0.79

6 11 0.00043 1.5 9.3 1.8 12 39 241 265 236 270 0.77

7 11 0.0036 12 6.4 2.4 6 38 264 293 259 298 0.81

8 11 4e-06 0.014 15.8 2.9 15 41 305 328 288 330 0.73

9 11 0.83 2.8e+03 -1.2 0.7 18 34 336 352 335 358 0.82

10 11 0.2 6.7e+02 0.8 2.0 19 38 365 381 350 386 0.78

11 11 0.028 94 3.5 1.0 17 41 391 412 376 413 0.74

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.017	59	4.2	0.7	24	43	43	59	39	60	0.77
2	11	6.6e-05	0.22	11.9	0.2	13	43	73	100	68	101	0.90
3	11	0.01	35	4.9	4.5	12	39	153	177	148	181	0.78
4	11	0.063	2.1e+02	2.4	0.5	15	29	184	198	178	210	0.82
5	11	0.00085	2.9	8.4	2.5	17	40	214	234	199	238	0.79
6	11	0.00043	1.5	9.3	1.8	12	39	241	265	236	270	0.77
7	11	0.0036	12	6.4	2.4	6	38	264	293	259	298	0.81
8	11	4e-06	0.014	15.8	2.9	15	41	305	328	288	330	0.73
9	11	0.83	2.8e+03	-1.2	0.7	18	34	336	352	335	358	0.82
10	11	0.2	6.7e+02	0.8	2.0	19	38	365	381	350	386	0.78
11	11	0.028	94	3.5	1.0	17	41	391	412	376	413	0.74

Sequence Information

Coding Sequence: ATGGATGGAAGTGATCtgataacaaataaaagtgCAAAATATGATAGCATCACTTGGAATCGAGCCAGATCTGCAAATCGCATGGCTAGTACAATTAGCGAACTAAACATGGTTGTGGTGTGCAATAagtcatttataaaaagtagcCATTTAAAAAGACACGTTCGTTCTATGCATGATGCCGATTTTGAATTACCTGTTCCAGAAAAATCACCTGAAAAGAAGGTGATGGAATGTGAATTTTGCGATAGAAAATTCAAGTACAAAAAGAGTTTTAATCATCATATGCAAACAGAACATGGAATGGAAAATGATAATGATAGTGATACACCGTTAATTGAGTTGATTGCCCCTGAAGAATTAACAGTAGAAATAGATTGTAACAataaagAAGATGAAAAGGATGAACAATCTGATCCAGCTTATGAACCTGAGGAAGAATCGAAGGCgccaactaaaaaaaattcacaccACACATGCCATGTCTGTGGTACAGTTTTCTCTCGCAGCAATCACCTCACAAGACACATGACTTTGCACCGagatcttttaaatttcaagtgtAACCAATGTGATAAAGCATATGCTTCACAAGAATATTTAGATAAACACAATAAAGAGGATCACGTCAATAAACCGTACACATGCACCATCTGCAATCGTACGTTCACAAGAGGCGAGCACTTAATCAGACATTTAAAAGTTCACATGCCTGAcgataaaaattccaaaagcTTAAAGTGTTCTGTTTGTATGAAAGAATTCTCAAGaTCCGATCACTTAGCAAGGCATATAAAGATACATCTGCAACAGGATAAGAGGCATGTTTGTAATGAATGTGGGAAGGCTTTTAATCGGCTTGATAACTTAAAAACACATCAGAGAATCCATACGGGGCAGCGTGATAATTCAAAACTGCACCTTTGCATATATTGcggaaaagaatttaataattctagtAATATGATTGTACATATGAGAAGACATACAGGAGAACGGCCATATAAATGTAGTCAATGCAACAAGGGATTTCCCCGATCTCACGATTTAAAATGTCATGAGAGAACACATTCTGGTGAAAAACCGTACTTATGCACATTATGtggaaaatcatttaataaaagcaacaAACTTctCCGACATTCGCGGGTTCATACAGGTGAACGTCCGTATGTATGCAATTTGTGTGGCCGAGGATTCACCCAATCAAATGATCTCGCTTTACATATGCGGAGACATACAGGATCTCGTCCTTATGCATGCGGCGTTTGCCCAGCACGATTTATACAATCTGGTCAACTTAAATCCCATCGAAAATCCACAGGTCATTGGATGGAAACTCAGCCGGATCTTAAAGGTGCACATAGAGTTGAACCTGTAGTACCGTTATCCGAACCAACtccaatcaaatttaaaacacatgGAAAACCAAAACAAGAGCTAGAATTTGAAAAGGAAGAACTTAGAGAAATTCAGGAGGGTCATGCCCCCACAATTTCTCTAGTTGGTGATATAAATGTACAAGTACCAATTGAACCACTTTTAGTGGTTGAGGGCACTAAAATATTAGAGCAGTACTCtcacttaaataattttagtaatacCTATGTAATAACCGAGGCGGCTAGGATTAAAATATCCGaggaacaaaaagaaaatggatcTAAGGATAATCCAGCTACATTCCAAACTTACGCGGCAACATCTACCACTAGTACCTTTAATAGTGCAACTTATGATTATCAAACTTACGGATAA
Protein Sequence: MDGSDLITNKSAKYDSITWNRARSANRMASTISELNMVVVCNKSFIKSSHLKRHVRSMHDADFELPVPEKSPEKKVMECEFCDRKFKYKKSFNHHMQTEHGMENDNDSDTPLIELIAPEELTVEIDCNNKEDEKDEQSDPAYEPEEESKAPTKKNSHHTCHVCGTVFSRSNHLTRHMTLHRDLLNFKCNQCDKAYASQEYLDKHNKEDHVNKPYTCTICNRTFTRGEHLIRHLKVHMPDDKNSKSLKCSVCMKEFSRSDHLARHIKIHLQQDKRHVCNECGKAFNRLDNLKTHQRIHTGQRDNSKLHLCIYCGKEFNNSSNMIVHMRRHTGERPYKCSQCNKGFPRSHDLKCHERTHSGEKPYLCTLCGKSFNKSNKLLRHSRVHTGERPYVCNLCGRGFTQSNDLALHMRRHTGSRPYACGVCPARFIQSGQLKSHRKSTGHWMETQPDLKGAHRVEPVVPLSEPTPIKFKTHGKPKQELEFEKEELREIQEGHAPTISLVGDINVQVPIEPLLVVEGTKILEQYSHLNNFSNTYVITEAARIKISEEQKENGSKDNPATFQTYAATSTTSTFNSATYDYQTYG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00369707;
90% Identity: iTF_00369707;
80% Identity: iTF_00369707;