Basic Information

Insect: Coproporus ventriculus
Gene Symbol: SMARCC2
Assembly: GCA_027574865.2
Location: JAODAH020050353.1:13574-19020[+]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 9.5e-15 1.2e-11 44.9 0.1 3 44 591 632 589 634 0.95

2 2 4.5 5.9e+03 -2.1 0.9 6 17 739 750 738 753 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	9.5e-15	1.2e-11	44.9	0.1	3	44	591	632	589	634	0.95
2	2	4.5	5.9e+03	-2.1	0.9	6	17	739	750	738	753	0.85

Sequence Information

Coding Sequence: ATGATTGCATTTGGACCGAAGAAGGACGGTGGTcctaacataaaatatttcgaagCTCCAGAAACCCTGACCGCtttagaaattgttaaaatttggtTGCAAAAGAACGCGAAAAAGttggtGCAATCGGATCCTCCTACAAATAAATCTCTCTCgactttattaattcaattactaCAGTTTCAAGAAGATAATTTGGGgaagaatatacaaaaaccTCCAATGACTAGGATTCCTGTGAAGTATTTTATGGATTTCAAGCCTGGAGGAGCCGTATGTTTGATGCTTACTACTGCGTACAGATATAAATTTGAGCAAGGAtggagaaaatttgattttcaaattgcaaagaatccAGGAAGGTTAGAAAAGTTGATAGAAATGTTCCAATCGATGGAGAAGGCActgattcaaaataaaatttacgttCTCCCAGTAATCTACATAAAACCCGaagttgataaaaatttagcaCTAAAACTAAAAGAGATTGTAAAGAAGCATAATGGACAGAATGTAGATAATGAAATGTCGGCTACACATATTTTATACCCCCATTGTGATCCGCTAGAAGAGGAGTATGCTCGACCTGGTATGAAACAAGATAAAATGATCATGATGCACTGGTATTATTTCCCAGATTCTTATGATACCTGGGTAAATATTGAGGGTGCGCTGGAagGTATGCCACTTGATGCACCACCTATCCACACCGGGCAATGGAGAGTCTCCTCAACTTGGCTGCTAGATTCCGATCAATATAATGAATGGATGTCTGAAGAGGATTATGAAGTCGATGAAGCAGGCAGGAAGAAAGTACATAAACTTCGGATGTCGGTGGAAGATCTTATGAATCCTGGTGATGACAAAAACAAgaagaaaatgacaaaaagaaaaagatctCCATCCCCACAATTAAAAGGTGGTAAAAGAAAAAGTGGCAGAAGTCCGGCAATAGGAAAGAAAACACGTCCCGAAGACCCCGAATCTGAAGATTTAACAAAGGATCTAGATGATCCTCTTCCTGAACCGAACATAACAGAAATGAATCCTACAGCAACCGGCCAACCTGGAAAGAAAGATCACGAACTGCAGCCATTAAAAGGTGGATCTATCACTGATTTAGATGATACAGAAGAAAGATGTGATGATTCTCAAACTGGGAAAAATTCCGATACAACTACTCAAGACGATGGACAAGAAGATAATGTCACAGAGCAGACTCATCATATAATCGTTCCGTCATATTCTTCTTGGTTTgattataattcaattcatGAAGTAGAGAAACGTGCTTTGCCAGAATTTTTTAACGGAAAGAACAAATCGAAAACaccagaaatttatttagcatATAGGAACTTTATGGTGGATACTTACAGACTTAATCCAACAGAATATATTACAAGTACTGCTTGCCGAAGAAATTTAGCTGGAGACGTTTGTGCTATAATGCGTGTGCATGCATTCCTAGAACAATggggattaattaattatcaagtGGATGCTGATTCAAGACCTACGCCTATTGGTCCACCACCGACCTCGCATTTTCATATACTTTCTGATACTCCTTCTGGTTTGCAACCAGTAAACCCACCAAAAACCCCACAACCCAGTGCTGCAAAAACATTATTAGATTTAGACAGGACACAAGACATCAAAAAGTCTGAAGGTGTGGATTCGATATCGAGTTTTGGATTAAAACTGGATCAGTATTCTAAGAAACCGGGCGctttgagaaataaaaatgctgCTTCTTTGGCAAGAGATTGGACTGAACAAGAAACTTTGCTTCTCCTCGAAGGTTTGGAAATGTATAAGGATGATTGGAATAAAGTTTGTGAGCATGTTGGATCTAGAACGCAAGACGAATGCATCCTACACTTTTTACGGCTACCAATTGAAGATCCATATTTAGAAGATCCAGAAGCTGGAGGTGCTTTGGGTCCCTTAGCTTATCAACCCATTCCATTCAGTAAAGCTGGTAATCCGATTATGTCAACGGTTGCATTTTTGGCTTCAATTGTTGATCCACGTGTAGCAGCAGCTGCAGCAAAATCTGCCATGAACGAATTTGCAAGTATTAAAGATGAAGTTCCTGCCGCCTTAATGGATGCTCATTTAAAGAATGTGGAGGCTTCTTCAGCTGATGGAAAATATGATCCTGCTGCTGGTTTAGCTTTAAGTGGAATTGCAGGAACTGTCCCAGAAAAGGAAGAGGATgacaaaattaagaaagaaattgagacCAAGGATGAAGAGAAAAGTGTACCTGTTGAACAGAAGAAGAATGGCTTAGAAATGactgaagaaaaaattgaagataaagtTGTGAAAATGGATACTCAGGATggtgaaaaagaagaaaaaatggatGCAACAGAAACCAAACCTGAAAGGGTGGTCCGTGATAGTGAAATGCAAAGTGCTGCAGCTGCTGCTTTAGCAGCAGCCGCTGTGAAAGCAAAACATTTAGCTGCAGTAGAAGAACGTAAAATTAAGTCTTTAGTTGCATTACTGGTAGAAAcccaaatgaaaaaattagaaataaaattgagacATTTTGAAGAATTAGAAACCACAATGGAGAGGGAACGGGAAGGGCTTGAATATCAAAGGCAACAGTTGATAACAGAACGGCAACAGTTTCATTTAGAACAATTAAAAGCTGCTGAATTTAGAGCCAGACAACAAGCACATCAAAGGCTACAAGCTGAACAGGGACAACAATGGGCGCAACAACAACCTCAGGTTCCACATACTGCCTCTACAGAAACAGGACCCAGCGCTACTCCAACACCACCTTCACCGCAAGCATCGGCAGTTACATCCCCTGCTCCTCCACACCACCacatataa
Protein Sequence: MIAFGPKKDGGPNIKYFEAPETLTALEIVKIWLQKNAKKLVQSDPPTNKSLSTLLIQLLQFQEDNLGKNIQKPPMTRIPVKYFMDFKPGGAVCLMLTTAYRYKFEQGWRKFDFQIAKNPGRLEKLIEMFQSMEKALIQNKIYVLPVIYIKPEVDKNLALKLKEIVKKHNGQNVDNEMSATHILYPHCDPLEEEYARPGMKQDKMIMMHWYYFPDSYDTWVNIEGALEGMPLDAPPIHTGQWRVSSTWLLDSDQYNEWMSEEDYEVDEAGRKKVHKLRMSVEDLMNPGDDKNKKKMTKRKRSPSPQLKGGKRKSGRSPAIGKKTRPEDPESEDLTKDLDDPLPEPNITEMNPTATGQPGKKDHELQPLKGGSITDLDDTEERCDDSQTGKNSDTTTQDDGQEDNVTEQTHHIIVPSYSSWFDYNSIHEVEKRALPEFFNGKNKSKTPEIYLAYRNFMVDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDADSRPTPIGPPPTSHFHILSDTPSGLQPVNPPKTPQPSAAKTLLDLDRTQDIKKSEGVDSISSFGLKLDQYSKKPGALRNKNAASLARDWTEQETLLLLEGLEMYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDPEAGGALGPLAYQPIPFSKAGNPIMSTVAFLASIVDPRVAAAAAKSAMNEFASIKDEVPAALMDAHLKNVEASSADGKYDPAAGLALSGIAGTVPEKEEDDKIKKEIETKDEEKSVPVEQKKNGLEMTEEKIEDKVVKMDTQDGEKEEKMDATETKPERVVRDSEMQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRLQAEQGQQWAQQQPQVPHTASTETGPSATPTPPSPQASAVTSPAPPHHHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00902171;
90% Identity: -
80% Identity: -