Cven018946.1
Basic Information
- Insect
- Coproporus ventriculus
- Gene Symbol
- Mblk-1
- Assembly
- GCA_027574865.2
- Location
- JAODAH020045557.1:1-2403[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.4e-18 9.5e-15 54.4 0.0 1 44 19 63 19 64 0.94 2 2 6.7e-19 1.4e-15 57.1 0.0 1 43 365 408 365 410 0.95
Sequence Information
- Coding Sequence
- tctGATTTTAGAGCGAAGCCTAGAGTGTCAGCGGTGGCTGGTCGAAGGACATATACAGAAGATGAGTTGCAGGCAGCGTTAAGGGATATACAATCCGGGAAATTAGGGACGAGAAGGGCTGCGGTGATTTATGGTATACCTAGATCCACATTAAGGAATAAAGTATACAAATTAGCCCTCGAAAGGGAACGGGAATCGCATTTAAATTCAGCTACAGCGTTAAAGATTGAAGAAGAGGAAGTTATGGATGATGATAAAGATTTATCAGGGgcggaagaagaaaaagaagtagAGAAGGCATTAGAAAGACCTTTATTATCAATGGCTGATATATTAAGGTTTAGTAATATGGAAAGTACGGAAGCTTTAAAATCTCTCCTCCAAAAAACTCAAGAAGGGGAGGGGGGATATGCAGGGATGGAACCTAATAATATAAGTTCATACATACAAAGTATGTTAATGAGTAAATTATTATCAGGTCAGAAAATAATGGAAGGAGGCGAATTAAACATCCCAGATGTAATGAAGCATATGATGGTTGATGAACAtgaaaagaatcaaaataatgGTGATGCGGATAAATTAAGTAGGCCGAGCCCCTCAAATTCGGTGATTATAAAAAGTGAGAAACCCTCGAAATCGGAAAGCGATATGGAAACGGAAGATTCAACCTCGAATGTGATACTTAAGATTCCGTCCTTTAAACCCACAAGTAGTAAAAACGGGGATGCCTACCGTAGTACCATTGATTCAAGTCTGGTTTCGCCACCCGTCACTAGTGAATCAAATTCGCCCCCGATTTTACCCGGGAAAGGGATGACACTTAAAGATGTTAAGGATGTTATTGCCAAAAGTATCAGCCAAAAATTTCAGCAAAGTCCCGAGCCTTCTTTAAGGCACCCGATTATTGATATGGAGTTTAAAAGGGGTGGTTTTACTCCACCCCTTGGGGGTATTTCAGTTATTAAAACCCCTCCCGAACATCCAAGGCCGTATCAACCACCCCAACAACAAAAACCTCAAAGTAACTCGAGTGGAAGTGCAACGGGGGGAAAGGGGACGCGTCCAAAAAGGGGTAAATACCGTAATTATGATAGGGATAGTCTTGTGGAAGCAGTACGGGCGGTGCAAAGGGGTGAAATGTCCGTGCATCGAGCCGGGAGTTACTACGGAGTTCCCCATTCAACCTTAGAATATAAAGTGAAAGAAAGACATTTAATGCGGCCGAGGAAACGGGACCCAAAACCGAACCCTGTggatgaaaaaattgcaagtttgaaacaaaatgatttaagaAACGCGGCGAATGATAAACTTAAAACGCAAGTGATCAAACCTCCGCAGAAATTTCCCCCTACATCCCCGAATGGTATTAAACTGCCAATGTACGACCCAAATTTAGGCCCTATGGGGTATAACCCACCTCCCTTCCCATTTTGGCCACCTCACCCCAGCTTCCATCACATCCCCTTGGATTATGGGAGATCCTCCACATCAACAGCATTCCCGGCAAATCCTGAACAATTCTTCGCATCACAAATGATGCAGAAGCTACACGAGGAATCATCACGAACTCACACCCCTAATTCAACCCCAATCCTAGCAAAAAGTGCTAAACAATTAGCCGAATCTCTTTTAGATAGTACGGGCTCAAATGGTTTCTTAGATGGAATAATAAGATCTAGTTTGGAATCAGGAGTCCCAATATGTGatgataaaaaagaagataaaaacgTGGCCCCGGAAAATATGTCAAACAAGGCCCTACTCGACCAATTATGCCGAAATAGTCGTTTGACTCCGCTTACAAAACCAAACATGACAGAATGTAGCTCAGGAGATGATGAAAGCATCAAGAACCCTCTGAATTTCAGTAAAGAGAAAGATGAAAACTCGATGGATCAAGATGGTTCCACAATGGAAAATTCCGATATCCAAACGATCGAGTTATCAAATGATTCGAACGACTCCACGAAGACGGAAGGGAAAAATGAACCACCTCCACCCCAACTCCCgggaagaatttatttaaaacaagaacTTACAAAACCAGAAAATCTAAAACCCGAGATGCTAGTTAGGTATAGGAATGTGCTGCACGACGTTGATAGGAACGGCATCACAGAAGGAAGTGCCTCCGAATCTGATGCTGCTCAAGACTGA
- Protein Sequence
- SDFRAKPRVSAVAGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALERERESHLNSATALKIEEEEVMDDDKDLSGAEEEKEVEKALERPLLSMADILRFSNMESTEALKSLLQKTQEGEGGYAGMEPNNISSYIQSMLMSKLLSGQKIMEGGELNIPDVMKHMMVDEHEKNQNNGDADKLSRPSPSNSVIIKSEKPSKSESDMETEDSTSNVILKIPSFKPTSSKNGDAYRSTIDSSLVSPPVTSESNSPPILPGKGMTLKDVKDVIAKSISQKFQQSPEPSLRHPIIDMEFKRGGFTPPLGGISVIKTPPEHPRPYQPPQQQKPQSNSSGSATGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKQNDLRNAANDKLKTQVIKPPQKFPPTSPNGIKLPMYDPNLGPMGYNPPPFPFWPPHPSFHHIPLDYGRSSTSTAFPANPEQFFASQMMQKLHEESSRTHTPNSTPILAKSAKQLAESLLDSTGSNGFLDGIIRSSLESGVPICDDKKEDKNVAPENMSNKALLDQLCRNSRLTPLTKPNMTECSSGDDESIKNPLNFSKEKDENSMDQDGSTMENSDIQTIELSNDSNDSTKTEGKNEPPPPQLPGRIYLKQELTKPENLKPEMLVRYRNVLHDVDRNGITEGSASESDAAQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -