Basic Information

Gene Symbol
ARID5B
Assembly
GCA_027574865.2
Location
JAODAH020014472.1:1-5169[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-25 6.3e-22 78.2 0.0 2 89 224 309 223 309 0.94

Sequence Information

Coding Sequence
GATGAAGTACTTGCAATTTCTGAAAAGGTTGTTTTAAGAGTAGAAGATTTAATAACATGGATCACAATAGATACAGAATGGAGTTGGGGTAAACTTGCCAAATATGTGGATATTTCTAATGAATTGGTTGAAGAAAATGGGGAACAAGATTCTACGACGAATATTAATGTTACATCTAAATTTACAGAAACGAGTTTAGATTTCTCAGATATAGAAAAGGAACGGAAATTATTAGatataaaaccAAGTAAAGGACCATCTGTAATAATTTTGAGTTATCCAAGATATTGTCGGTATCGTGCTATCATGAAAAGATTGGAAGGTGTTGAAGATGAATATTTAAggcataaaattgtttatgctTTAGGTGGTATCCGTGTGAAAGCTGATAATACTCGGATACTGTTttgtaaagaaacttttgatTATCCAGAATTGGAAGGACATGAATTGTTGTGTAATCATTTAGCACCGAAATTGAAAGGTAGACCTAGAGGGAAACGGAAAAAGAGGAGCATTTCACCGGGTTCGGAAAGTAATGAATCTGAATCTTCTGTTTCCAATACATTCACAGTTAAGaatAAAATTACAGCAGAAGGAAGTAGAAATGGTTTACGTTGCGATGCTGCGTCGTTAAGACGAAGTACTCGCTCAACTGAAATTTCTGAGAGCAAagactttattaaaaatttatcggcatttatgaaaaataatcgAACACCTATAGGACGAATACCATCATTAGGATATAAAGAATtgGACCtgtattcattttatacaaaagtacaaaaattagGGGGCTATGATGTTGTAACAGCGAATCGATTGTGGAAAtctatttttgatgatttaagcGGGAATCAAATCAGTACAAGTGCAGCAACGGTTATCAGAAGGCATTATGAAAgatttttactTGCGtacgaaagaaatttaaaaggtgAAGAATATAAACCACTTCCTGTTTCTGAaagaagaagattaaaaagtaAAGCGGGGAGTACTAGCACAAGTGACGCTGAAAATAGTGAAGGTACTTCAAGAAGCGGAAATACTACTCCTGTACCGATTAGTGGACCAAGTCATTCCCATTTAATTACACCAAATACAGAAAATAAGgACGTTCCAAAAATTGAATCCAAACCATCATCTCTTCGAAGTGTAAGAGTAAAATCGGAACGGATGAGAGAGAAAACAATAGAAAGTTGTAGTGGAATTTCTTCAGCACCTTCATCCCTTGTAATATCTCCATTACCTGCAAAAACTTCATCACCAGTAGTATCTCCAACATCTATAACACCTTCATCGCCTGTAATTCCACCGTTATCTCcaattcaagataaaaaagaagatataaaGCCACATATTGAGAAAGATCCCGAACCTGAAATTGGAGCTGTTGCACCTGTACAAAAATTATCCTCCGAAAAAAGTGTTTCACCTGTCGAAGGCAAAGAAAACATCCCCTTATTCAATGCAATCGAAgcgcaaaataaaaattcatcagATGATGATCTCGTTGAAGTGCCATATAAACCTAAAACACCAGAAATAATAGATTTGGAATCGGATATTTATATGagtaaaacaaaacataataataataataacaatattattaatgtgaataataataatagccTAACGATACAGAAAGTGCAAGAAgttaaaaaagggaaattggatattttaaaagaaggtGGATTAGAGGTAACGCCGGTGAGAAGTTTTATTCAGCAAAGTGGGAAGGAATCGCGGCCTTCGGTTATACAAggaaataacgaaaaaaatcaaatgccCCCACCTTCAATTAATGCAAGTTTGATAAGAAGGACATCACAATGTATACCGTTATCTCCCCCTGTTCAATGTACGCAATTACCTCCACCAAAAAAAGGagaatttttaggttataaatttaacgGGGCTTCACCCCCAAAAGTAGTTCAATCTAAATCAATTTATGCACCATCACAAAAAAAGGTGTACGGTGATCcgaaagatttattatttcaacaagTGCAAATACCAAAACCGGTGAATAATGTGAATAAAACGGATTTATTGGATTTGACTGTGCGGAGTCCACAAAAACCAATCGTCGAAATTATGAGGGTGCCATCTATACCTTCACCAAAATTACCTAATTCAATTATGAACCACCAAtcgaaaaatttgtataatacgCCATCCCTTCCTTTATTAGATGGGAGGAGGGTAAGCTCAAACTTGGAAATTACTTTAGTAGGACCGAGTAAATCACAACCGCACCAATCAAAACATCATAGCAgtagtaataataaacatcACCATGCTCCACCTTTTCATGGTAGTTACGTACCTAAACAACCCCAGAAACGTAATATGATGGACAACTACCAACCTTATAAATATCCGCGAGttgaagaaaatggaaaacacCGAACTACTATTCCATCTTTGTATCCACCTCGTGGGTACATGAAACCTCCATCTAAACATGAACTTCCCCATCCAAAACCATCAAATCCCTACCAGCGACATCCAAATTTAAAACCGGATCCACCTAAACCCATTCCGCAAGCAATACCTAGcacgaataataaatatcctCCCAGCATTGCGCCGCTCTACCCAAACTTTCTAACCCCTTCATCCTCATCAAGCAGTAAAGGAATTTCGCCTTATATGCA
Protein Sequence
DEVLAISEKVVLRVEDLITWITIDTEWSWGKLAKYVDISNELVEENGEQDSTTNINVTSKFTETSLDFSDIEKERKLLDIKPSKGPSVIILSYPRYCRYRAIMKRLEGVEDEYLRHKIVYALGGIRVKADNTRILFCKETFDYPELEGHELLCNHLAPKLKGRPRGKRKKRSISPGSESNESESSVSNTFTVKNKITAEGSRNGLRCDAASLRRSTRSTEISESKDFIKNLSAFMKNNRTPIGRIPSLGYKELDLYSFYTKVQKLGGYDVVTANRLWKSIFDDLSGNQISTSAATVIRRHYERFLLAYERNLKGEEYKPLPVSERRRLKSKAGSTSTSDAENSEGTSRSGNTTPVPISGPSHSHLITPNTENKDVPKIESKPSSLRSVRVKSERMREKTIESCSGISSAPSSLVISPLPAKTSSPVVSPTSITPSSPVIPPLSPIQDKKEDIKPHIEKDPEPEIGAVAPVQKLSSEKSVSPVEGKENIPLFNAIEAQNKNSSDDDLVEVPYKPKTPEIIDLESDIYMSKTKHNNNNNNIINVNNNNSLTIQKVQEVKKGKLDILKEGGLEVTPVRSFIQQSGKESRPSVIQGNNEKNQMPPPSINASLIRRTSQCIPLSPPVQCTQLPPPKKGEFLGYKFNGASPPKVVQSKSIYAPSQKKVYGDPKDLLFQQVQIPKPVNNVNKTDLLDLTVRSPQKPIVEIMRVPSIPSPKLPNSIMNHQSKNLYNTPSLPLLDGRRVSSNLEITLVGPSKSQPHQSKHHSSSNNKHHHAPPFHGSYVPKQPQKRNMMDNYQPYKYPRVEENGKHRTTIPSLYPPRGYMKPPSKHELPHPKPSNPYQRHPNLKPDPPKPIPQAIPSTNNKYPPSIAPLYPNFLTPSSSSSSKGISPYM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-