Basic Information

Insect: Copidosoma floridanum
Gene Symbol: stc
Assembly: GCA_000648655.2
Location: NW:94577-104404[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1 1.1e+04 -4.3 1.6 15 19 527 531 526 531 0.81

2 15 0.069 7.9e+02 -0.4 0.1 4 10 560 566 559 567 0.94

3 15 1.6e-07 0.0019 17.6 12.8 4 19 577 592 575 592 0.93

4 15 3.6e-07 0.0042 16.5 16.7 1 18 628 645 628 646 0.98

5 15 0.16 1.9e+03 -1.6 1.8 1 10 655 664 655 664 0.88

6 15 1.5e-07 0.0017 17.7 13.3 1 18 684 701 684 702 0.93

7 15 0.75 8.5e+03 -3.7 1.4 5 10 731 736 731 736 0.93

8 15 1.9e-05 0.21 11.0 11.7 4 18 749 763 742 764 0.85

9 15 0.78 9e+03 -3.8 2.0 5 10 793 798 793 798 0.93

10 15 0.025 2.8e+02 1.0 6.6 1 11 804 814 804 815 0.94

11 15 6.6e-09 7.6e-05 22.0 12.6 1 19 831 849 831 849 0.98

12 15 1 1.1e+04 -4.2 0.7 6 10 878 882 877 882 0.78

13 15 0.25 2.8e+03 -2.2 4.7 10 19 896 906 893 906 0.78

14 15 0.043 4.9e+02 0.3 16.7 1 16 942 957 932 968 0.79

15 15 5.7e-07 0.0065 15.8 14.1 1 19 974 993 974 993 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1	1.1e+04	-4.3	1.6	15	19	527	531	526	531	0.81
2	15	0.069	7.9e+02	-0.4	0.1	4	10	560	566	559	567	0.94
3	15	1.6e-07	0.0019	17.6	12.8	4	19	577	592	575	592	0.93
4	15	3.6e-07	0.0042	16.5	16.7	1	18	628	645	628	646	0.98
5	15	0.16	1.9e+03	-1.6	1.8	1	10	655	664	655	664	0.88
6	15	1.5e-07	0.0017	17.7	13.3	1	18	684	701	684	702	0.93
7	15	0.75	8.5e+03	-3.7	1.4	5	10	731	736	731	736	0.93
8	15	1.9e-05	0.21	11.0	11.7	4	18	749	763	742	764	0.85
9	15	0.78	9e+03	-3.8	2.0	5	10	793	798	793	798	0.93
10	15	0.025	2.8e+02	1.0	6.6	1	11	804	814	804	815	0.94
11	15	6.6e-09	7.6e-05	22.0	12.6	1	19	831	849	831	849	0.98
12	15	1	1.1e+04	-4.2	0.7	6	10	878	882	877	882	0.78
13	15	0.25	2.8e+03	-2.2	4.7	10	19	896	906	893	906	0.78
14	15	0.043	4.9e+02	0.3	16.7	1	16	942	957	932	968	0.79
15	15	5.7e-07	0.0065	15.8	14.1	1	19	974	993	974	993	0.97

Sequence Information

Coding Sequence: ATGGCCACCTGGGACGGCTCTTACCCAGAGCCAGATGGGCCCAATTATTACGCCAACAGCTCCGTCAGTCAGATACCTGCCAATATCCCAGCTTGGGATTACTATCTGCCCAATCACACCAACGCCTATCCCCAAAATCCAGTCAACTCGTATCCCATTCATCGAACAATGGTCTTTGAGCAGAGCACACCTGCTGGTCCTACTTACTACAATAATACTGATGGGAACGTCATTCCTGCTTTGGTGCCAAACGTTGCAACAAATGCCGATTCGTATTCTAACAATGGGATACCAGCTGTTTCTAACAAGATTCACAAAGTAGGCAACTCCGAAGCAAATTTCAAGACCACTAATAATCAGTTGCCTTGTTTCTATGAGGATAACAAAATAGCTCAACAGGCTTACTACAACAGAAACAATTTTCCGACCAATAGTAAATACAAGGATACAAACAAGACTTACGATGTCTCCAGTATAGTCGAGAACTCAAATTTGCACGCCACTGCTATGGAATTCGTACCGaatctgaataaaaaagatCGCAATACCAATAGCGTCAATGCATATACGAATAGCAAAGGTCGCACGAATGATAATTATCAGAAGCCAGAAGTTGATCAGGACCAGCAAGTTGTAGATtctaataatgtttttgttgaGGATAACAAGCAAAATGATAggaaatttgataacaaaaaggATGCTGGGAGAAAATGGAGAGACAATCAAAGTAATGGCCAATACTACAGGGATGATAGGAAGGAGTACGGTAAGccccaaaattttaaaaaatatcagaacGATAGATACAGTACGAATCAAAGTTTCAACGACAAACCGCGAAATAATCGCTCCAAGAAAGATGACACGGAGAGTGTGACTTCAGAAACTAGTGCAGGTGTGGAGCTGGAGACAATCGACGGTCGTCAGGATAGTTTTGGCAATACCGAGAAGGGCGATGCGTTCGTTAAAACAGACAACACTCAGGCGGTGACACCTCGATCAGCGAAAAATTCAAGGCCATTCTCAAATAATAATCGAGGAGATAGATACGACAGGTACAACAGTAGAGACCCGAGAGAATCTCGAGATCCGAGGGATTTCAGGGAAAATCGGGATCACAGGAATTCGCGAGATCCTAGATATTCGCGGGACTTTAGAGACACTCGGGATTCGAGAGATTTTAGGGATAGGAAAAATAACCATACGGAGCACAATGGATACaatagaaataattacaatCGAGATAAGTACGAAAGAAGAGATAATAGGACCGCTGCCACTGAAAATCGTAGTAAAGATTTTACCGATTGGAGACAAAGGCCCAACAATGATACCGGCAGTAAGGTGATTCTCCTCAAACGTtcgaacaacaaaaaatatgaaccAGATGATGCAGCCAGTCAGAGGGAAAGATTAACGGAGCAACTGAACCGAGGTAATTTGGAGTGTTTGGTATGCTGTGAATCCATTCGGCAAAATGACTACGTGTGGTCGTGCAACAACTGCTACCACGTCCTGCATCTAAAGTGCGTGCAGAAATGGGCCAAATCGTCGCAAGATGATACCGGCTGGCGCTGTCCTGCCTGCCAGAACGTCACGTCAAATGTGCCTTCGGATTACTTGTGCTTCTGCGGTAAAACGAACAATCCCGAGTGGAACAGACGCGACATCGCCCACTCGTGCGGCGAAATCTGCGGACGCCCACGCTCGGAGGTCAGTTGTGTCCACAAGTGCACGCTTCTCTGTCACCCGGGCGCTTGTCCGCCCTGCTCAGCCATGGTCGTCAAGTACTGCGGCTGCAAGCGCACGTCGCGCTCTCAGAAGTGCAGCGCTGGCCCGATGTTGCAGTGCGACGAGATCTGCGATCGCGTGCTCAACTGTGGGCTGCACAAGTGCAAGAGACAGTGTCACCATGGGGAATGCGAGCCTTGCGATGAGATTGTCAAGCAAGAATGCTTCTGTGGAAAGCACAGCCGGGAAAAGACCTGCGTCCTCGATTTGCCGCTGGTGTACTCTTGCGACAACGTTTGCGACAGAGAACTTGATTGTAAAAATCACAAGTGCACAGATATATGTCACCCCGGAAGCTGTGGCCCTTGCGTTCTGAAACCCGAGACTGTGACCCACTGCTGCTGTGGCCAAACAGTTTTGACCGTCAAACGGGAAAGCTGCTTGGATCCTATTTCGACTTGTGACAAAACGTGTTCCAAACAATTGAAGTGCGGTCAGCCAAACAATCCCCATACCTGCCGAGCAAACTGCCACGTGGGCGACTGCCCCGACTGCGAATTGATCACAAAGGTCAGGTGTCGTTGCGGCCACATGGACAAGGAGATCCCTTGCACGGAACTTAAAACCAAGGCCGACGACGCTCGCTGCGAAAAAAAGTGTACTAAGAAACGCTCGTGTGCCAAGCACAAGTGTAACCAGATGTGCTGCATCGACATCGAGCACATATGCCCGCTATCCTGCTCCAAGACCCTGAGTTGCGGAAAGCATAGATGCGAGCAGACTTGTCACAAAAGTAGATGTCAACCCTGCTGGCGGAGCTCGTTCGACGAGCTGTACTGCGAGTGCGGCGCGGCCGTGATGTATCCACCCGTACCGTGCGGCGCCCGCCGGCCGGCCTGCGACAAGCCCTGTAGCCGCGAACACCCTTGCGACCACGAAGTCATGCACAACTGCCACAGCGACTCAACCTGTCCACCCTGCAGCGTACTCACGCAGAAATGGTGTTACGGGCGCCACGAGCTGCGCAAAGCCGTGCCGTGTTACGTCAACGACGTGTCCTGCGGTCTGCCTTGCGGGAAACCAATATCTTGCAAAAGACACAAGTGCATACAGATGTGCCACCCGGACCCATGCGAAAAGCCCGGACAGATCTGTACGCAGCCGTGTACCGTCCCTCGCGAGACCTGTGGCCATAACTGTGCCGCGCCCTGTCACGACGGCAAGTGCCCCGACACACCTTGCAAGGAGATGATCAAGGTGACCTGCCAGTGCGGCAACAGAACGACGCTGCGTGTGTGCGCCGAAAATGCACGCGACTACCAGCGCATAGTCAGCGGTGTATTGGCGAGCAGAATGGCGGACGTGCAGCTGGGTCACTCGGTGAAGCTCGAGGAGGTGTTCGGTCAGGGCGCTCGCAAGCAGAACCAGCTCAAGACGTTGGAGTGCAACGACGATTGCAAGATGATCGAGCGCAACAGGCGGCTGGCGCTAGGGTTGCAGATAGTCAATCCAGACCTCAGTGGCAAGCTCATGCCCAGGTACAGCGACTTCATGAGGCAGTGGGCCAAGAAGGATCCCGCCTTTTGCCAGGTTGTGCATGACAAGCTGACCGAGCTCGTACAACTGGCCAAGACGTCGAAACAAAAATCCCGGAGCTTCTCGTTCGAGGTCATGAACAGGGACAAGAGGCAGTTTGTGCACGAGTCGTGCGACCACTTTGGCTGCGAGAGTCACGCTTACGATCAGGAGCCGAAACGCAATGTCGTCGCCACGGCTGTTAAAGATAAGTGTTGGTTGCCAAGCTATAGTCTTATTGAGATGCTGCAAAGAGAAAACGGGCAGCGGAAAGTACCAGGCCCAATGAACACGTCAAAACTGAATAGTACTGAtagGAGCAAGGACGTTTTAACACTAAATTTCAAGAAGATTGTTAATCCTTTACCTGCAACTCCCAGGGCGATCTCCCCATCAAGGTCTCCTGAGCCAGAgatagattattttaattacaaggGTTAA
Protein Sequence: MATWDGSYPEPDGPNYYANSSVSQIPANIPAWDYYLPNHTNAYPQNPVNSYPIHRTMVFEQSTPAGPTYYNNTDGNVIPALVPNVATNADSYSNNGIPAVSNKIHKVGNSEANFKTTNNQLPCFYEDNKIAQQAYYNRNNFPTNSKYKDTNKTYDVSSIVENSNLHATAMEFVPNLNKKDRNTNSVNAYTNSKGRTNDNYQKPEVDQDQQVVDSNNVFVEDNKQNDRKFDNKKDAGRKWRDNQSNGQYYRDDRKEYGKPQNFKKYQNDRYSTNQSFNDKPRNNRSKKDDTESVTSETSAGVELETIDGRQDSFGNTEKGDAFVKTDNTQAVTPRSAKNSRPFSNNNRGDRYDRYNSRDPRESRDPRDFRENRDHRNSRDPRYSRDFRDTRDSRDFRDRKNNHTEHNGYNRNNYNRDKYERRDNRTAATENRSKDFTDWRQRPNNDTGSKVILLKRSNNKKYEPDDAASQRERLTEQLNRGNLECLVCCESIRQNDYVWSCNNCYHVLHLKCVQKWAKSSQDDTGWRCPACQNVTSNVPSDYLCFCGKTNNPEWNRRDIAHSCGEICGRPRSEVSCVHKCTLLCHPGACPPCSAMVVKYCGCKRTSRSQKCSAGPMLQCDEICDRVLNCGLHKCKRQCHHGECEPCDEIVKQECFCGKHSREKTCVLDLPLVYSCDNVCDRELDCKNHKCTDICHPGSCGPCVLKPETVTHCCCGQTVLTVKRESCLDPISTCDKTCSKQLKCGQPNNPHTCRANCHVGDCPDCELITKVRCRCGHMDKEIPCTELKTKADDARCEKKCTKKRSCAKHKCNQMCCIDIEHICPLSCSKTLSCGKHRCEQTCHKSRCQPCWRSSFDELYCECGAAVMYPPVPCGARRPACDKPCSREHPCDHEVMHNCHSDSTCPPCSVLTQKWCYGRHELRKAVPCYVNDVSCGLPCGKPISCKRHKCIQMCHPDPCEKPGQICTQPCTVPRETCGHNCAAPCHDGKCPDTPCKEMIKVTCQCGNRTTLRVCAENARDYQRIVSGVLASRMADVQLGHSVKLEEVFGQGARKQNQLKTLECNDDCKMIERNRRLALGLQIVNPDLSGKLMPRYSDFMRQWAKKDPAFCQVVHDKLTELVQLAKTSKQKSRSFSFEVMNRDKRQFVHESCDHFGCESHAYDQEPKRNVVATAVKDKCWLPSYSLIEMLQRENGQRKVPGPMNTSKLNSTDRSKDVLTLNFKKIVNPLPATPRAISPSRSPEPEIDYFNYKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -