Cflr006700.1
Basic Information
- Insect
- Copidosoma floridanum
- Gene Symbol
- gatad1
- Assembly
- GCA_000648655.2
- Location
- NW:3631470-3632913[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.8e-09 8.7e-06 24.6 1.3 1 29 9 35 9 41 0.84
Sequence Information
- Coding Sequence
- ATGCCCCTAGGAGATAAACCAGAATGTGTTCAGTGCAGCACCAAGGAGAGTCCACTGTGGCACGGGACCGACGCCGGTAGCCTTTGCAATGATTGTCTCGAGAAGAGCAAATTCAAAGCCGAGGATGAGGAGGCTGCTGTGGTTAAAACAGATCCTCCTGAGGAAGCCACTGTTTCTACAACTTCAGCAACGACTAcaccagcaacaacaacaacgacgacagCAACGTCCATGGCAGCAAACGCGAGGAAGGTTACCCGTGCTGTCACAAAATGTAATGGGAAACCTGGCAGGCCTCCTGGTAGCAAGAATGCCCTCAAAGGCAAGGGTCGGCGACACATTTTTAAGAAGACGcctgTGAAGTCACCAGCTGCCACTGCAACATCAGTGACAAGTAATTATGTGTTTTACAAAGGTTCTTACTTCCAAGTTGGTGACATAGTATCCATGCAGGATACTGACGGTGGTATCTATTACGCTCAAATCCGAGGATTATTAACGGATCAGTATTGTGAAAAAAGTGCAGCAATCACGTGGCTTTTACCAACCACAGCTAGTCCGCCCCCCGAAGAGGGTTTTAATCCAGAAACATATATCATTGGGCCGGAAGAAGAATTACCACGGAAACTTGAATACATGGAGTTCATCATGCATGCTCCGTCTGactattacaaattaaaaaacactcCTTACCCTCCGATCCTTCAAGAAGGAGGTAATGGCTATGTTTGGACAACACTGACAAATGAAAGTTTTCAAAGGTAG
- Protein Sequence
- MPLGDKPECVQCSTKESPLWHGTDAGSLCNDCLEKSKFKAEDEEAAVVKTDPPEEATVSTTSATTTPATTTTTTATSMAANARKVTRAVTKCNGKPGRPPGSKNALKGKGRRHIFKKTPVKSPAATATSVTSNYVFYKGSYFQVGDIVSMQDTDGGIYYAQIRGLLTDQYCEKSAAITWLLPTTASPPPEEGFNPETYIIGPEEELPRKLEYMEFIMHAPSDYYKLKNTPYPPILQEGGNGYVWTTLTNESFQR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -